RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 PLEKHA3Q9HB20 300 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 PALMDQ9NP74 551 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 FAM212BQ9NTI7 297 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-211ENST00000568291 C21orf62Q9NYP8 219 aa7.18□□□□□ -1.26
SF3B3-211ENST00000568291 RYR2Q92736 4967 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 IGHV3-49A0A0A0MS15 119 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 TMEM213A2RRL7 107 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 I3L2K1 104 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 TGOLN2O43493 480 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 SCAF4O95104 1147 aaKnown RBP7.17□□□□□ -1.26
SF3B3-211ENST00000568291 MT-CO2P00403 227 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 CD7P09564 240 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 IGHV4-30-4P0DP06 118 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 CCR6P51684 374 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 SUPT4H1P63272 117 aaKnown RBP7.17□□□□□ -1.26
SF3B3-211ENST00000568291 TMEM187Q14656 261 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 FAM106AQ4KMX7 169 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 ZNF57Q68EA5 555 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-211ENST00000568291 LYZL2Q7Z4W2 148 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 SLC35G3Q8N808 338 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 VN1R17PQ8TDU5 208 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 DYNLRB2Q8TF09 96 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 ZNF414Q96IQ9 312 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 C20orf24Q9BUV8 137 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 SRRQ9GZT4 340 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 ZMAT4Q9H898 229 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 GAR1Q9NY12 217 aaKnown RBP7.17□□□□□ -1.26
SF3B3-211ENST00000568291 THYN1Q9P016 225 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 RABL2AQ9UBK7 228 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-211ENST00000568291 PEMTQ9UBM1 199 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 CACNG5Q9UF02 275 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 MLXQ9UH92 298 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 SCP2D1Q9UJQ7 156 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 RABL2BQ9UNT1 228 aa7.17□□□□□ -1.26
SF3B3-211ENST00000568291 IGHV3OR16-13A0A075B7E8 117 aa7.16□□□□□ -1.26
SF3B3-211ENST00000568291 IGHV3-74A0A0B4J1X5 117 aa7.16□□□□□ -1.26
SF3B3-211ENST00000568291 LCE6AA0A183 80 aa7.16□□□□□ -1.26
SF3B3-211ENST00000568291 ZNF701M0R085 212 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-211ENST00000568291 LGALS9O00182 355 aa7.16□□□□□ -1.26
SF3B3-211ENST00000568291 CTSGP08311 255 aa7.16□□□□□ -1.26
SF3B3-211ENST00000568291 FGF2P09038 288 aa7.16□□□□□ -1.26
SF3B3-211ENST00000568291 SNCAP37840 140 aa7.16□□□□□ -1.26
SF3B3-211ENST00000568291 HOXA1P49639 335 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-211ENST00000568291 ERHP84090 104 aaKnown RBP7.16□□□□□ -1.26
SF3B3-211ENST00000568291 SURF2Q15527 256 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-211ENST00000568291 FAM209BQ5JX69 171 aa7.16□□□□□ -1.26
SF3B3-211ENST00000568291 LCE2CQ5TA81 110 aa7.16□□□□□ -1.26
SF3B3-211ENST00000568291 ZFAND6Q6FIF0 208 aa7.16□□□□□ -1.26
SF3B3-211ENST00000568291 BTNL8Q6UX41 500 aa7.16□□□□□ -1.26
SF3B3-211ENST00000568291 HSD17B13Q7Z5P4 300 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-211ENST00000568291 SGPP2Q8IWX5 399 aa7.16□□□□□ -1.26
SF3B3-211ENST00000568291 CADM3Q8N126 398 aa7.16□□□□□ -1.26
SF3B3-211ENST00000568291 DEFB125Q8N687 156 aa7.16□□□□□ -1.26
SF3B3-211ENST00000568291 OR1P1Q8NH06 330 aa7.16□□□□□ -1.26
SF3B3-211ENST00000568291 RBPMSQ93062 196 aaKnown RBP7.16□□□□□ -1.26
SF3B3-211ENST00000568291 SDHCQ99643 169 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-211ENST00000568291 SLC2A8Q9NY64 477 aa7.16□□□□□ -1.26
SF3B3-211ENST00000568291 MRPL36Q9P0J6 103 aaKnown RBP7.16□□□□□ -1.26
SF3B3-211ENST00000568291 HUWE1Q7Z6Z7 4374 aaKnown RBP7.16□□□□□ -1.26
SF3B3-211ENST00000568291 CYB5BO43169 146 aa7.15□□□□□ -1.26
SF3B3-211ENST00000568291 YIF1AO95070 293 aa7.15□□□□□ -1.26
SF3B3-211ENST00000568291 RNASE2P10153 161 aaKnown RBP7.15□□□□□ -1.26
SF3B3-211ENST00000568291 CD81P60033 236 aa7.15□□□□□ -1.26
SF3B3-211ENST00000568291 DHODHQ02127 395 aa7.15□□□□□ -1.26
SF3B3-211ENST00000568291 SPANXN2Q5MJ10 180 aa7.15□□□□□ -1.26
SF3B3-211ENST00000568291 THOC7Q6I9Y2 204 aaKnown RBP7.15□□□□□ -1.26
SF3B3-211ENST00000568291 LCN12Q6JVE5 192 aa7.15□□□□□ -1.26
SF3B3-211ENST00000568291 FAM219AQ8IW50 185 aa7.15□□□□□ -1.26
SF3B3-211ENST00000568291 TMEM61Q8N0U2 210 aa7.15□□□□□ -1.26
SF3B3-211ENST00000568291 CITED4Q96RK1 184 aa7.15□□□□□ -1.26
SF3B3-211ENST00000568291 PDCD10Q9BUL8 212 aa7.15□□□□□ -1.26
SF3B3-211ENST00000568291 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-211ENST00000568291 SIGLEC8Q9NYZ4 499 aa7.15□□□□□ -1.26
SF3B3-211ENST00000568291 FLVCR2Q9UPI3 526 aa7.15□□□□□ -1.26
SF3B3-211ENST00000568291 TMEM56-RWDD3S4R434 201 aa7.15□□□□□ -1.26
SF3B3-211ENST00000568291 IGHV3-66A0A0C4DH42 116 aa7.14□□□□□ -1.27
SF3B3-211ENST00000568291 CEBPZOSA8MTT3 80 aa7.14□□□□□ -1.27
SF3B3-211ENST00000568291 ATG12O94817 140 aa7.14□□□□□ -1.27
SF3B3-211ENST00000568291 VAMP1P23763 118 aa7.14□□□□□ -1.27
SF3B3-211ENST00000568291 MFAP4P55083 255 aa7.14□□□□□ -1.27
SF3B3-211ENST00000568291 ANKRD55Q3KP44 614 aa7.14□□□□□ -1.27
SF3B3-211ENST00000568291 BSCL2Q96G97 398 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-211ENST00000568291 LYSTQ99698 3801 aa7.14□□□□□ -1.27
SF3B3-211ENST00000568291 NEURL2Q9BR09 285 aa7.14□□□□□ -1.27
SF3B3-211ENST00000568291 TM2D3Q9BRN9 247 aa7.14□□□□□ -1.27
SF3B3-211ENST00000568291 ZNF436Q9C0F3 470 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-211ENST00000568291 FNDC4Q9H6D8 234 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-211ENST00000568291 ENY2Q9NPA8 101 aa7.14□□□□□ -1.27
SF3B3-211ENST00000568291 HEYLQ9NQ87 328 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-211ENST00000568291 KCNIP3Q9Y2W7 256 aa7.14□□□□□ -1.27
SF3B3-211ENST00000568291 IGKV3-7A0A075B6H7 116 aa7.13□□□□□ -1.27
SF3B3-211ENST00000568291 FAUP35544 74 aaKnown RBP7.13□□□□□ -1.27
SF3B3-211ENST00000568291 INPP1P49441 399 aa7.13□□□□□ -1.27
SF3B3-211ENST00000568291 AP3S2P59780 193 aa7.13□□□□□ -1.27
SF3B3-211ENST00000568291 SPCS3P61009 180 aa7.13□□□□□ -1.27
SF3B3-211ENST00000568291 PPP1R1AQ13522 171 aa7.13□□□□□ -1.27
SF3B3-211ENST00000568291 TRIQKQ629K1 86 aa7.13□□□□□ -1.27
SF3B3-211ENST00000568291 ZNF114Q8NC26 417 aa7.13□□□□□ -1.27
SF3B3-211ENST00000568291 OR1L6Q8NGR2 347 aa7.13□□□□□ -1.27
SF3B3-211ENST00000568291 TMEM170AQ8WVE7 144 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms