RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 C3orf85A0A1B0GTC6 90 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 RBMY1BA6NDE4 496 aaKnown RBP3.59□□□□□ -1.83
CLK3-219ENST00000567805 RBMY1EA6NEQ0 496 aaKnown RBP3.59□□□□□ -1.83
CLK3-219ENST00000567805 C15orf62A8K5M9 175 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 F8W735 103 aaPredicted RBP3.59□□□□□ -1.83
CLK3-219ENST00000567805 INS-IGF2F8WCM5 200 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 K7EIM0 57 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 K7EMT4 169 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 NDUFA4O00483 81 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 CTDSPLO15194 276 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 B3GALNT1O75752 331 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 ATG12O94817 140 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 SCAF4O95104 1147 aaKnown RBP3.59□□□□□ -1.83
CLK3-219ENST00000567805 RAB3DO95716 219 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 CD74P04233 296 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 RBMY1DP0C7P1 496 aaKnown RBP3.59□□□□□ -1.83
CLK3-219ENST00000567805 PI3P19957 117 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 AKR1C2P52895 323 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 PPP5CP53041 499 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 TMBIM6P55061 237 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 HSPE1P61604 102 aaKnown RBP3.59□□□□□ -1.83
CLK3-219ENST00000567805 ERHP84090 104 aaKnown RBP3.59□□□□□ -1.83
CLK3-219ENST00000567805 RELQ04864 619 aaPredicted RBP3.59□□□□□ -1.83
CLK3-219ENST00000567805 MEF2DQ14814 521 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 SPCS2Q15005 226 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 SCGB2B2Q4G0G5 96 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 Q56UQ5 140 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 STEAP1BQ6NZ63 245 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 BTNL8Q6UX41 500 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 RBPMS2Q6ZRY4 209 aaKnown RBP3.59□□□□□ -1.83
CLK3-219ENST00000567805 CLVS1Q8IUQ0 354 aaPredicted RBP3.59□□□□□ -1.83
CLK3-219ENST00000567805 OR2C3Q8N628 320 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 DEFB125Q8N687 156 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 CCDC71LQ8N9Z2 235 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 UBAC2Q8NBM4 344 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 OR4D10Q8NGI6 311 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 OR52B4Q8NGK2 314 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 TERB2Q8NHR7 220 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 TP53RKQ96S44 253 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 TXN2Q99757 166 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 SPAG8Q99932 426 aaPredicted RBP3.59□□□□□ -1.83
CLK3-219ENST00000567805 CHRDL1Q9BU40 450 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 WFDC10AQ9H1F0 79 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 MIXL1Q9H2W2 232 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 HIPK2Q9H2X6 1198 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 C5orf66Q9H5L9 145 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 SRD5A3Q9H8P0 318 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 EDA2RQ9HAV5 297 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 CCDC59Q9P031 241 aaKnown RBP3.59□□□□□ -1.83
CLK3-219ENST00000567805 COPZ2Q9P299 210 aa3.59□□□□□ -1.83
CLK3-219ENST00000567805 TENM2Q9NT68 2774 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 IGHV3-21A0A0B4J1V1 117 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 A0A0B4J293 547 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 DISC1C4P0D8 188 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 FAM229AH3BQW9 127 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 I3L2K1 104 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 CORTO00230 105 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 CTDSP2O14595 271 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 TSPAN4O14817 238 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 NUPL2O15504 423 aaKnown RBP3.58□□□□□ -1.84
CLK3-219ENST00000567805 ST8SIA3O43173 380 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 NOL3O60936 208 aaKnown RBP3.58□□□□□ -1.84
CLK3-219ENST00000567805 MT-CO2P00403 227 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 IFNA17P01571 189 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 IGKV1-5P01602 117 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 CTSDP07339 412 aaPredicted RBP3.58□□□□□ -1.84
CLK3-219ENST00000567805 CTSGP08311 255 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 P0C879 139 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 AKAIN1P0CW23 69 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 UCP1P25874 307 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 FCGR2BP31994 310 aaPredicted RBP3.58□□□□□ -1.84
CLK3-219ENST00000567805 ADMP35318 185 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 SNCAP37840 140 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 SUB1P53999 127 aaKnown RBP eCLIP3.58□□□□□ -1.84
CLK3-219ENST00000567805 MFAP4P55083 255 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 SUMO1P63165 101 aaKnown RBP3.58□□□□□ -1.84
CLK3-219ENST00000567805 IL18Q14116 193 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 SURF2Q15527 256 aaPredicted RBP3.58□□□□□ -1.84
CLK3-219ENST00000567805 IZUMO4Q1ZYL8 232 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 TRIM16LQ309B1 348 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 ANKRD39Q53RE8 183 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 LAMTOR1Q6IAA8 161 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 SLC35G3Q8N808 338 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 OR13C8Q8NGS7 320 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 MARCH1Q8TCQ1 289 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 DYNC2LI1Q8TCX1 351 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 SMIM4Q8WVI0 70 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 RRNAD1Q96FB5 475 aaKnown RBP3.58□□□□□ -1.84
CLK3-219ENST00000567805 MISP3Q96FF7 219 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 DIRAS2Q96HU8 199 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 OR10C1Q96KK4 312 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 PRRT1Q99946 306 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 PDCD10Q9BUL8 212 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 C20orf24Q9BUV8 137 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 NXF2Q9GZY0 626 aaKnown RBP3.58□□□□□ -1.84
CLK3-219ENST00000567805 C14orf166Q9Y224 244 aaKnown RBP3.58□□□□□ -1.84
CLK3-219ENST00000567805 SELENOKQ9Y6D0 94 aa3.58□□□□□ -1.84
CLK3-219ENST00000567805 DNAH1Q9P2D7 4330 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 IGHV3OR16-8A0A075B7F1 116 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 LOC102724200A0A096LPH7 203 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms