RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	ARL6IP6	Q8N6S5	226 aa		5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	OR1L6	Q8NGR2	347 aa		5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	OR5B3	Q8NH48	314 aa		5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	TERB2	Q8NHR7	220 aa		5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	ZNF502	Q8TBZ5	544 aa		5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	SMIM4	Q8WVI0	70 aa		5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	LSM10	Q969L4	123 aa	Known RBP	5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	SEC22A	Q96IW7	307 aa		5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	TMEM56	Q96MV1	263 aa		5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	C7orf50	Q9BRJ6	194 aa	Known RBP	5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	TMEM14B	Q9NUH8	114 aa		5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	MBD2	Q9UBB5	411 aa		5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	C15orf61	A6NNL5	157 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	C3orf84	H3BNL1	204 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	LYRM1	O43325	122 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	RAB3D	O95716	219 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	GPR183	P32249	361 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	MFAP2	P55001	183 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	PIGP	P57054	158 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	RND3	P61587	244 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	SSBP1	Q04837	148 aa	Known RBP	5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	GUCA2B	Q16661	112 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	HAGH	Q16775	308 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	TM4SF20	Q53R12	229 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	ZNF600	Q6ZNG1	722 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	NRARP	Q7Z6K4	114 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	TOMM5	Q8N4H5	51 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	ARRDC1	Q8N5I2	433 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	TMEM229B	Q8NBD8	167 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	UXS1	Q8NBZ7	420 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	OR4A16	Q8NH70	328 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	SVIP	Q8NHG7	77 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	ENKUR	Q8TC29	256 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	DEDD2	Q8WXF8	326 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	ATP6V0B	Q99437	205 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	TM2D3	Q9BRN9	247 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	SLC2A8	Q9NY64	477 aa		5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	F11R	Q9Y624	299 aa	Known RBP	5.22	□□□□□ -1.57
SF3B3-209	ENST00000567635	IGHV3-21	A0A0B4J1V1	117 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	IGHV3-35	A0A0C4DH35	117 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	C3orf85	A0A1B0GTC6	90 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	FAM240B	A0A1B0GVZ2	78 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	TMEM213	A2RRL7	107 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	NAP1L6	A6NFF2	107 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	OR2T8	A6NH00	312 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	DBX1	A6NMT0	343 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635		A8MWP6	167 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	TSPAN4	O14817	238 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	TGOLN2	O43493	480 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	ATG12	O94817	140 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	IGKV1-39	P01597	117 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	C1QB	P02746	253 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	CD74	P04233	296 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	IGKV1D-39	P04432	117 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	C8orf88	P0DMB2	117 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	PI3	P19957	117 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	EDN2	P20800	178 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	ELL	P55199	621 aa	Predicted RBP	5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	TAS2R19	P59542	299 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	AP3S2	P59780	193 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	CD81	P60033	236 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	SST	P61278	116 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	HSPE1	P61604	102 aa	Known RBP	5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	FLI1	Q01543	452 aa	Predicted RBP	5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	KLF9	Q13886	244 aa	Predicted RBP	5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	ANKRD55	Q3KP44	614 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	SCGB2B2	Q4G0G5	96 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	STEAP1B	Q6NZ63	245 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	SPSB3	Q6PJ21	355 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	UNQ9165/PRO28630	Q6UXU0	137 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	LHFPL1	Q86WI0	220 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	LILRB2	Q8N423	598 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	OR1P1	Q8NH06	330 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	MUC7	Q8TAX7	377 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	SCARB1	Q8WTV0	552 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	CACNG8	Q8WXS5	425 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	MARC2	Q969Z3	335 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	MRGPRF	Q96AM1	343 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	WDR89	Q96FK6	387 aa	Predicted RBP	5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	BSCL2	Q96G97	398 aa	Predicted RBP	5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	ZNF436	Q9C0F3	470 aa	Predicted RBP	5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	GAR1	Q9NY12	217 aa	Known RBP	5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	C21orf62	Q9NYP8	219 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	MRPL27	Q9P0M9	148 aa	Known RBP	5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	COPZ2	Q9P299	210 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	MLX	Q9UH92	298 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	UFC1	Q9Y3C8	167 aa		5.21	□□□□□ -1.58
SF3B3-209	ENST00000567635	TRAV25	A0A0B4J276	109 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	ANKRD20A5P	A0PJZ0	165 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	ZNF98	A6NK75	572 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	OR11H12	B2RN74	326 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635		K7EIM0	57 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	NDUFA4	O00483	81 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	CD7	P09564	240 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	LYL1	P12980	280 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	HOXA1	P49639	335 aa	Predicted RBP	5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	MFAP4	P55083	255 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	RAB14	P61106	215 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	POLR2G	P62487	172 aa	Known RBP eCLIP	5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms