RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 ZFHX4Q86UP3 3567 aa17.65■□□□□ 0.42
SPSB3-208ENST00000566339 BMPR1BO00238 502 aa17.65■□□□□ 0.42
SPSB3-208ENST00000566339 FAM162BQ5T6X4 162 aa17.65■□□□□ 0.42
SPSB3-208ENST00000566339 HES3Q5TGS1 186 aa17.65■□□□□ 0.42
SPSB3-208ENST00000566339 SMIM12Q96EX1 92 aa17.65■□□□□ 0.42
SPSB3-208ENST00000566339 ZNF331Q9NQX6 463 aaPredicted RBP17.65■□□□□ 0.42
SPSB3-208ENST00000566339 ZNF71Q9NQZ8 489 aaPredicted RBP17.65■□□□□ 0.42
SPSB3-208ENST00000566339 AHRRA9YTQ3 701 aa17.64■□□□□ 0.41
SPSB3-208ENST00000566339 SFTPCP11686 197 aa17.64■□□□□ 0.41
SPSB3-208ENST00000566339 KRTDAPP60985 99 aa17.64■□□□□ 0.41
SPSB3-208ENST00000566339 CD69Q07108 199 aa17.64■□□□□ 0.41
SPSB3-208ENST00000566339 C9orf106Q8NAJ2 232 aa17.64■□□□□ 0.41
SPSB3-208ENST00000566339 SLC35D1Q9NTN3 355 aa17.64■□□□□ 0.41
SPSB3-208ENST00000566339 SLC25A15Q9Y619 301 aa17.64■□□□□ 0.41
SPSB3-208ENST00000566339 GGTLC3B5MD39 225 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 OR7C2O60412 319 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 APCSP02743 223 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 SELENOVP59797 346 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 HOXA4Q00056 320 aaPredicted RBP17.63■□□□□ 0.41
SPSB3-208ENST00000566339 KLF5Q13887 457 aaPredicted RBP17.63■□□□□ 0.41
SPSB3-208ENST00000566339 VWA1Q6PCB0 445 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 DHRS13Q6UX07 377 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 BHLHA15Q7RTS1 189 aaPredicted RBP17.63■□□□□ 0.41
SPSB3-208ENST00000566339 STARD4Q96DR4 205 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 OR2V2Q96R30 315 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 CBY1Q9Y3M2 126 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 CFAP47Q6ZTR5 3102 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 USP24Q9UPU5 2620 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 F2Z2F3 143 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 ZNF83P51522 516 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 SPATA45Q537H7 98 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 IGFL2Q6UWQ7 119 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 C1orf229Q6ZS94 237 aaPredicted RBP17.63■□□□□ 0.41
SPSB3-208ENST00000566339 DOLPP1Q86YN1 238 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 MBD6Q96DN6 1003 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 FZR1Q9UM11 496 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 PROCRQ9UNN8 238 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 MSRB2Q9Y3D2 182 aa17.63■□□□□ 0.41
SPSB3-208ENST00000566339 KNTC1P50748 2209 aa17.62■□□□□ 0.41
SPSB3-208ENST00000566339 TET2Q6N021 2002 aaPredicted RBP17.62■□□□□ 0.41
SPSB3-208ENST00000566339 ACTL6BO94805 426 aa17.62■□□□□ 0.41
SPSB3-208ENST00000566339 RNASE2P10153 161 aaKnown RBP17.62■□□□□ 0.41
SPSB3-208ENST00000566339 CD33P20138 364 aa17.62■□□□□ 0.41
SPSB3-208ENST00000566339 GLRXP35754 106 aa17.62■□□□□ 0.41
SPSB3-208ENST00000566339 CYB5R2Q6BCY4 276 aa17.62■□□□□ 0.41
SPSB3-208ENST00000566339 OR1L4Q8NGR5 311 aa17.62■□□□□ 0.41
SPSB3-208ENST00000566339 OSR1Q8TAX0 266 aaPredicted RBP17.62■□□□□ 0.41
SPSB3-208ENST00000566339 BORCS7Q96B45 105 aa17.62■□□□□ 0.41
SPSB3-208ENST00000566339 GRAMD2BQ96HH9 432 aa17.62■□□□□ 0.41
SPSB3-208ENST00000566339 RNASE7Q9H1E1 156 aaKnown RBP17.62■□□□□ 0.41
SPSB3-208ENST00000566339 TEX50A0A1B0GTY4 177 aa17.61■□□□□ 0.41
SPSB3-208ENST00000566339 IGLC2P0DOY2 106 aa17.61■□□□□ 0.41
SPSB3-208ENST00000566339 IGLC3P0DOY3 106 aa17.61■□□□□ 0.41
SPSB3-208ENST00000566339 SRIP30626 198 aa17.61■□□□□ 0.41
SPSB3-208ENST00000566339 SLC25A48Q6ZT89 311 aaKnown RBP17.61■□□□□ 0.41
SPSB3-208ENST00000566339 ATP5L2Q7Z4Y8 100 aa17.61■□□□□ 0.41
SPSB3-208ENST00000566339 LYG1Q8N1E2 194 aa17.61■□□□□ 0.41
SPSB3-208ENST00000566339 ZNRF1Q8ND25 227 aa17.61■□□□□ 0.41
SPSB3-208ENST00000566339 OR4A5Q8NH83 315 aa17.61■□□□□ 0.41
SPSB3-208ENST00000566339 RBM14Q96PK6 669 aaKnown RBP17.61■□□□□ 0.41
SPSB3-208ENST00000566339 CACNA1BQ00975 2339 aa17.61■□□□□ 0.41
SPSB3-208ENST00000566339 PSMB11A5LHX3 300 aa17.61■□□□□ 0.41
SPSB3-208ENST00000566339 DPRXA6NFQ7 191 aa17.61■□□□□ 0.41
SPSB3-208ENST00000566339 OR2J3O76001 311 aa17.61■□□□□ 0.41
SPSB3-208ENST00000566339 ATP1A1-AS1Q5TC04 95 aa17.61■□□□□ 0.41
SPSB3-208ENST00000566339 TMPRSS7Q7RTY8 843 aa17.61■□□□□ 0.41
SPSB3-208ENST00000566339 NIT1Q86X76 327 aa17.61■□□□□ 0.41
SPSB3-208ENST00000566339 PLPPR2Q96GM1 343 aa17.61■□□□□ 0.41
SPSB3-208ENST00000566339 MRPS16Q9Y3D3 137 aaKnown RBP17.61■□□□□ 0.41
SPSB3-208ENST00000566339 IGLV3-9A0A075B6K5 115 aa17.6■□□□□ 0.41
SPSB3-208ENST00000566339 A0A1W2PN81 502 aa17.6■□□□□ 0.41
SPSB3-208ENST00000566339 KLF3P57682 345 aaPredicted RBP17.6■□□□□ 0.41
SPSB3-208ENST00000566339 STUMQ69YW2 141 aa17.6■□□□□ 0.41
SPSB3-208ENST00000566339 TSKUQ8WUA8 353 aa17.6■□□□□ 0.41
SPSB3-208ENST00000566339 RNF7Q9UBF6 113 aa17.6■□□□□ 0.41
SPSB3-208ENST00000566339 CACNA1GO43497 2377 aa17.6■□□□□ 0.41
SPSB3-208ENST00000566339 IGKV1OR2-108A0A075B7D4 117 aa17.59■□□□□ 0.41
SPSB3-208ENST00000566339 C3orf79P0CE67 100 aa17.59■□□□□ 0.41
SPSB3-208ENST00000566339 USF1P22415 310 aaPredicted RBP17.59■□□□□ 0.41
SPSB3-208ENST00000566339 ERHP84090 104 aaKnown RBP17.59■□□□□ 0.41
SPSB3-208ENST00000566339 MOGAT3Q86VF5 341 aa17.59■□□□□ 0.41
SPSB3-208ENST00000566339 FAM167A-AS1Q96KT0 104 aa17.59■□□□□ 0.41
SPSB3-208ENST00000566339 FAM103A1Q9BTL3 118 aaKnown RBP17.59■□□□□ 0.41
SPSB3-208ENST00000566339 SAP30LQ9HAJ7 183 aa17.59■□□□□ 0.41
SPSB3-208ENST00000566339 DNAJC4Q9NNZ3 241 aa17.59■□□□□ 0.41
SPSB3-208ENST00000566339 RPUSD1Q9UJJ7 312 aaKnown RBP17.59■□□□□ 0.41
SPSB3-208ENST00000566339 TRAV17A0A0B4J275 112 aa17.58■□□□□ 0.41
SPSB3-208ENST00000566339 FRMD6-AS1P0C7T7 363 aa17.58■□□□□ 0.41
SPSB3-208ENST00000566339 TMEM190Q8WZ59 177 aa17.58■□□□□ 0.41
SPSB3-208ENST00000566339 KMT2BQ9UMN6 2715 aaPredicted RBP17.58■□□□□ 0.4
SPSB3-208ENST00000566339 IGHV3OR15-7A0A075B7D8 119 aa17.58■□□□□ 0.4
SPSB3-208ENST00000566339 CT45A6P0DMU7 189 aa17.58■□□□□ 0.4
SPSB3-208ENST00000566339 CT45A5P0DMU8 189 aa17.58■□□□□ 0.4
SPSB3-208ENST00000566339 CT45A7P0DMV0 189 aa17.58■□□□□ 0.4
SPSB3-208ENST00000566339 HNRNPA3P51991 378 aaKnown RBP17.58■□□□□ 0.4
SPSB3-208ENST00000566339 TIMM23BQ5SRD1 257 aa17.58■□□□□ 0.4
SPSB3-208ENST00000566339 DMRTA1Q5VZB9 504 aa17.58■□□□□ 0.4
SPSB3-208ENST00000566339 ORAOV1Q8WV07 137 aa17.58■□□□□ 0.4
SPSB3-208ENST00000566339 HINT2Q9BX68 163 aa17.58■□□□□ 0.4
SPSB3-208ENST00000566339 GCM1Q9NP62 436 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms