RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 DUX3Q96PT4 197 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 OR5B12Q96R08 314 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 C11orf1Q9H5F2 150 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 FNDC4Q9H6D8 234 aaPredicted RBP6.3□□□□□ -1.4
CDH13-208ENST00000566333 CACFD1Q9UGQ2 172 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 FBXL7Q9UJT9 491 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 S4R3C0 116 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 MEGF8Q7Z7M0 2845 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 IGHV4OR15-8A0A075B7B6 117 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 A0A087WW49 117 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 A0A0G2JLM5 398 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 NUDT19A8MXV4 375 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 FAM25EA8MYX2 175 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 PRSS46E5RG02 174 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 K7EPK0 472 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 M0QZ24 198 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 BMPR1BO00238 502 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 SSNA1O43805 119 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 SSSCA1O60232 199 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 SCGB1D2O95969 90 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 IGHV3-23P01764 117 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 HIST1H1BP16401 226 aaKnown RBP6.29□□□□□ -1.4
CDH13-208ENST00000566333 CXCL3P19876 107 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 NPY1RP25929 384 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 HTR2BP41595 481 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 PAX9P55771 341 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 ERHP84090 104 aaKnown RBP6.29□□□□□ -1.4
CDH13-208ENST00000566333 C2orf83Q53S99 150 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 PRR31Q5SQ13 230 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 GSG1LQ6UXU4 331 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 OR11H7Q8NGC8 314 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 ZNF502Q8TBZ5 544 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 C2orf50Q96LR7 162 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 OR4C12Q96R67 309 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 ENY2Q9NPA8 101 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 HEYLQ9NQ87 328 aaPredicted RBP6.29□□□□□ -1.4
CDH13-208ENST00000566333 MRPL36Q9P0J6 103 aaKnown RBP6.29□□□□□ -1.4
CDH13-208ENST00000566333 MGAT4CQ9UBM8 478 aa6.29□□□□□ -1.4
CDH13-208ENST00000566333 FBN3Q75N90 2809 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.28□□□□□ -1.4
CDH13-208ENST00000566333 IGHV3-21A0A0B4J1V1 117 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 C13orf42A0A1B0GVH6 325 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 C5orf51A6NDU8 294 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 H3BP45 60 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 CCL24O00175 119 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 MED6O75586 246 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 MT-CO2P00403 227 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 SNCAP37840 140 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 ATP5G2Q06055 141 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 RAB32Q13637 225 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 FCN2Q15485 313 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 SLC25A24Q6NUK1 477 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 LINC00482Q8N8I6 264 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 OR4F17Q8NGA8 305 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 OR1L6Q8NGR2 347 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 VN1R17PQ8TDU5 208 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 SCARB1Q8WTV0 552 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 EEF1AKMT3Q96AZ1 226 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 MISP3Q96FF7 219 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 OR4F4Q96R69 305 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 NMES1Q9C002 83 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 GSKIPQ9P0R6 139 aa6.28□□□□□ -1.4
CDH13-208ENST00000566333 TRBV7-1A0A0A6YYK4 115 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 ANKRD34BA5PLL1 514 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 PMS2P5A8MQ11 134 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 PPP5D1E7EU14 171 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 H0YIZ8 118 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 WRBO00258 174 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 CYB5BO43169 146 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 CCNKO75909 580 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 IGHV3-48P01763 117 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 HOXD3P31249 432 aaPredicted RBP6.27□□□□□ -1.41
CDH13-208ENST00000566333 FCGR2BP31994 310 aaPredicted RBP6.27□□□□□ -1.41
CDH13-208ENST00000566333 GPR183P32249 361 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 SLURP1P55000 103 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 RRAS2P62070 204 aaPredicted RBP6.27□□□□□ -1.41
CDH13-208ENST00000566333 ZNF616Q08AN1 781 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 TMEM14EPQ6UXP3 125 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 OR11H1Q8NG94 326 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 RNASEH2CQ8TDP1 164 aaKnown RBP6.27□□□□□ -1.41
CDH13-208ENST00000566333 PINX1Q96BK5 328 aaKnown RBP6.27□□□□□ -1.41
CDH13-208ENST00000566333 SMIM8Q96KF7 97 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 CXorf58Q96LI9 332 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 CIB3Q96Q77 187 aaPredicted RBP6.27□□□□□ -1.41
CDH13-208ENST00000566333 HIPK2Q9H2X6 1198 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 C21orf62Q9NYP8 219 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 THYN1Q9P016 225 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 U3KQ87 197 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 SORL1Q92673 2214 aa6.27□□□□□ -1.41
CDH13-208ENST00000566333 OR2T8A6NH00 312 aa6.26□□□□□ -1.41
CDH13-208ENST00000566333 LINC01619G3V211 115 aa6.26□□□□□ -1.41
CDH13-208ENST00000566333 CORTO00230 105 aa6.26□□□□□ -1.41
CDH13-208ENST00000566333 TSC22D2O75157 780 aa6.26□□□□□ -1.41
CDH13-208ENST00000566333 DEDDO75618 318 aa6.26□□□□□ -1.41
CDH13-208ENST00000566333 IFNA10P01566 189 aa6.26□□□□□ -1.41
CDH13-208ENST00000566333 PF4P02776 101 aa6.26□□□□□ -1.41
CDH13-208ENST00000566333 HSPB1P04792 205 aaKnown RBP6.26□□□□□ -1.41
CDH13-208ENST00000566333 ADMP35318 185 aa6.26□□□□□ -1.41
CDH13-208ENST00000566333 MYCNOSP40205 109 aa6.26□□□□□ -1.41
CDH13-208ENST00000566333 OPRK1P41145 380 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms