RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 RAB31Q13636 194 aa13.44□□□□□ -0.26
RAB40C-210ENST00000566290 ZNF726P1Q15940 193 aa13.44□□□□□ -0.26
RAB40C-210ENST00000566290 ACSM6Q6P461 480 aa13.44□□□□□ -0.26
RAB40C-210ENST00000566290 TEPPQ6URK8 271 aa13.44□□□□□ -0.26
RAB40C-210ENST00000566290 TMEM144Q7Z5S9 345 aa13.44□□□□□ -0.26
RAB40C-210ENST00000566290 RPP25LQ8N5L8 163 aaKnown RBP13.44□□□□□ -0.26
RAB40C-210ENST00000566290 GGTLC1Q9BX51 225 aa13.44□□□□□ -0.26
RAB40C-210ENST00000566290 SLC35B3Q9H1N7 401 aa13.44□□□□□ -0.26
RAB40C-210ENST00000566290 NARFLQ9H6Q4 476 aa13.44□□□□□ -0.26
RAB40C-210ENST00000566290 RFNGQ9Y644 331 aa13.44□□□□□ -0.26
RAB40C-210ENST00000566290 CORTO00230 105 aa13.43□□□□□ -0.26
RAB40C-210ENST00000566290 CYB5BO43169 146 aa13.43□□□□□ -0.26
RAB40C-210ENST00000566290 SLC25A17O43808 307 aa13.43□□□□□ -0.26
RAB40C-210ENST00000566290 IFNA1P01562 189 aa13.43□□□□□ -0.26
RAB40C-210ENST00000566290 ZFP36P26651 326 aaKnown RBP13.43□□□□□ -0.26
RAB40C-210ENST00000566290 UBE2E1P51965 193 aa13.43□□□□□ -0.26
RAB40C-210ENST00000566290 CD69Q07108 199 aa13.43□□□□□ -0.26
RAB40C-210ENST00000566290 ARSJQ5FYB0 599 aaPredicted RBP13.43□□□□□ -0.26
RAB40C-210ENST00000566290 VMO1Q7Z5L0 202 aa13.43□□□□□ -0.26
RAB40C-210ENST00000566290 MOB3BQ86TA1 216 aa13.43□□□□□ -0.26
RAB40C-210ENST00000566290 PPP1R27Q86WC6 154 aa13.43□□□□□ -0.26
RAB40C-210ENST00000566290 SFT2D1Q8WV19 159 aa13.43□□□□□ -0.26
RAB40C-210ENST00000566290 P2RX4Q99571 388 aa13.43□□□□□ -0.26
RAB40C-210ENST00000566290 ACTR3CQ9C0K3 210 aaPredicted RBP13.43□□□□□ -0.26
RAB40C-210ENST00000566290 FAM96BQ9Y3D0 163 aa13.43□□□□□ -0.26
RAB40C-210ENST00000566290 MEGF8Q7Z7M0 2845 aa13.42□□□□□ -0.26
RAB40C-210ENST00000566290 MAP1LC3B2A6NCE7 125 aa13.42□□□□□ -0.26
RAB40C-210ENST00000566290 RPL27AP46776 148 aaKnown RBP13.42□□□□□ -0.26
RAB40C-210ENST00000566290 PPT1P50897 306 aa13.42□□□□□ -0.26
RAB40C-210ENST00000566290 FFAR4Q5NUL3 377 aa13.42□□□□□ -0.26
RAB40C-210ENST00000566290 MGST2Q99735 147 aa13.42□□□□□ -0.26
RAB40C-210ENST00000566290 MAP1LC3BQ9GZQ8 125 aa13.42□□□□□ -0.26
RAB40C-210ENST00000566290 LPAR2Q9HBW0 351 aa13.42□□□□□ -0.26
RAB40C-210ENST00000566290 LOC102723971A0A1B0GUV8 181 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 IGLC7A0M8Q6 106 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 TIMM23O14925 209 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 AGPAT2O15120 278 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 MOSP00540 346 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 IGKV1D-33P01593 117 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 IGKV1-33P01594 117 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 BCL2P10415 239 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 PRR20EP86478 221 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 PRR20CP86479 221 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 PRR20DP86480 221 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 PRR20BP86481 221 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 PRR20AP86496 221 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 WT1-ASQ06250 92 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 LDLRAD2Q5SZI1 272 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 Q8N6K4 173 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 OR10G9Q8NGN4 311 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 OR10G7Q8NGN6 311 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 C1orf159Q96HA4 380 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 SLC35E1Q96K37 410 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 NKX6-2Q9C056 277 aaPredicted RBP13.41□□□□□ -0.26
RAB40C-210ENST00000566290 EIF5A2Q9GZV4 153 aaKnown RBP13.41□□□□□ -0.26
RAB40C-210ENST00000566290 VSIRQ9H7M9 311 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 MANBALQ9NQG1 85 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 SIRT7Q9NRC8 400 aa13.41□□□□□ -0.26
RAB40C-210ENST00000566290 C9JQL5 133 aa13.4□□□□□ -0.26
RAB40C-210ENST00000566290 CRYGCP07315 174 aa13.4□□□□□ -0.26
RAB40C-210ENST00000566290 MYOD1P15172 320 aa13.4□□□□□ -0.26
RAB40C-210ENST00000566290 CCL20P78556 96 aa13.4□□□□□ -0.26
RAB40C-210ENST00000566290 AKR1C1Q04828 323 aa13.4□□□□□ -0.26
RAB40C-210ENST00000566290 ETFRF1Q6IPR1 90 aa13.4□□□□□ -0.26
RAB40C-210ENST00000566290 RBMS3Q6XE24 437 aaKnown RBP13.4□□□□□ -0.26
RAB40C-210ENST00000566290 OR2T10Q8NGZ9 312 aa13.4□□□□□ -0.26
RAB40C-210ENST00000566290 MALSU1Q96EH3 234 aa13.4□□□□□ -0.26
RAB40C-210ENST00000566290 HINT2Q9BX68 163 aa13.4□□□□□ -0.26
RAB40C-210ENST00000566290 TMEM231Q9H6L2 316 aa13.4□□□□□ -0.26
RAB40C-210ENST00000566290 SLC39A9Q9NUM3 307 aa13.4□□□□□ -0.26
RAB40C-210ENST00000566290 TGP01266 2768 aa13.39□□□□□ -0.27
RAB40C-210ENST00000566290 SVEP1Q4LDE5 3571 aa13.39□□□□□ -0.27
RAB40C-210ENST00000566290 NBR2O15453 112 aa13.39□□□□□ -0.27
RAB40C-210ENST00000566290 ACTL6BO94805 426 aa13.39□□□□□ -0.27
RAB40C-210ENST00000566290 SNRNP70P08621 437 aaKnown RBP13.39□□□□□ -0.27
RAB40C-210ENST00000566290 CDC34P49427 236 aaPredicted RBP13.39□□□□□ -0.27
RAB40C-210ENST00000566290 PSMB3P49720 205 aa13.39□□□□□ -0.27
RAB40C-210ENST00000566290 ELLP55199 621 aaPredicted RBP13.39□□□□□ -0.27
RAB40C-210ENST00000566290 ICAM4Q14773 271 aa13.39□□□□□ -0.27
RAB40C-210ENST00000566290 OR1L6Q8NGR2 347 aa13.39□□□□□ -0.27
RAB40C-210ENST00000566290 OR1P1Q8NH06 330 aa13.39□□□□□ -0.27
RAB40C-210ENST00000566290 SUN5Q8TC36 379 aa13.39□□□□□ -0.27
RAB40C-210ENST00000566290 TBX15Q96SF7 602 aa13.39□□□□□ -0.27
RAB40C-210ENST00000566290 TXNDC17Q9BRA2 123 aa13.39□□□□□ -0.27
RAB40C-210ENST00000566290 METTL1Q9UBP6 276 aaKnown RBP13.39□□□□□ -0.27
RAB40C-210ENST00000566290 PXMP4Q9Y6I8 212 aa13.39□□□□□ -0.27
RAB40C-210ENST00000566290 TOX4O94842 621 aa13.38□□□□□ -0.27
RAB40C-210ENST00000566290 YIF1AO95070 293 aa13.38□□□□□ -0.27
RAB40C-210ENST00000566290 SRP19P09132 144 aaKnown RBP13.38□□□□□ -0.27
RAB40C-210ENST00000566290 DEFA5Q01523 94 aa13.38□□□□□ -0.27
RAB40C-210ENST00000566290 PAX8Q06710 450 aa13.38□□□□□ -0.27
RAB40C-210ENST00000566290 CYB5R2Q6BCY4 276 aa13.38□□□□□ -0.27
RAB40C-210ENST00000566290 SSX7Q7RTT5 188 aa13.38□□□□□ -0.27
RAB40C-210ENST00000566290 SLC16A13Q7RTY0 426 aa13.38□□□□□ -0.27
RAB40C-210ENST00000566290 THAP8Q8NA92 274 aa13.38□□□□□ -0.27
RAB40C-210ENST00000566290 RITA1Q96K30 269 aa13.38□□□□□ -0.27
RAB40C-210ENST00000566290 TPSG1Q9NRR2 321 aa13.38□□□□□ -0.27
RAB40C-210ENST00000566290 VAX2Q9UIW0 290 aa13.38□□□□□ -0.27
RAB40C-210ENST00000566290 SLC45A2Q9UMX9 530 aa13.38□□□□□ -0.27
RAB40C-210ENST00000566290 ARL2-SNX15V9GYD0 113 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms