RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 MRGPRFQ96AM1 343 aa11.26□□□□□ -0.61
CMTM3-212ENST00000566121 GALNT14Q96FL9 552 aa11.26□□□□□ -0.61
CMTM3-212ENST00000566121 ABHD1Q96SE0 405 aa11.26□□□□□ -0.61
CMTM3-212ENST00000566121 TRAV14DV4A0A0A6YYC5 116 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 TRAV2A0A0B4J234 112 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 GABARAPH6UMI1 98 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 CORTO00230 105 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 CHEK1O14757 476 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 MT-CO2P00403 227 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 IGKV1-5P01602 117 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 CD3DP04234 171 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 UCP1P25874 307 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 SUB1P53999 127 aaKnown RBP eCLIP11.25□□□□□ -0.61
CMTM3-212ENST00000566121 PIGPP57054 158 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 TAS2R19P59542 299 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 SURF2Q15527 256 aaPredicted RBP11.25□□□□□ -0.61
CMTM3-212ENST00000566121 BSXQ3C1V8 233 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 FAM219AQ8IW50 185 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 TMEM116Q8NCL8 245 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 OR52E5Q8NH55 327 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 RNF183Q96D59 192 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 RHPN1-AS1Q9BWJ2 59 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 VSIRQ9H7M9 311 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 CACFD1Q9UGQ2 172 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 KMT2AQ03164 3969 aa11.25□□□□□ -0.61
CMTM3-212ENST00000566121 C3orf85A0A1B0GTC6 90 aa11.24□□□□□ -0.61
CMTM3-212ENST00000566121 FAM25AB3EWG3 89 aa11.24□□□□□ -0.61
CMTM3-212ENST00000566121 FAM25CB3EWG5 89 aa11.24□□□□□ -0.61
CMTM3-212ENST00000566121 FAM25GB3EWG6 89 aa11.24□□□□□ -0.61
CMTM3-212ENST00000566121 M0QYG6 137 aa11.24□□□□□ -0.61
CMTM3-212ENST00000566121 CTDSPLO15194 276 aa11.24□□□□□ -0.61
CMTM3-212ENST00000566121 CDS2O95674 445 aa11.24□□□□□ -0.61
CMTM3-212ENST00000566121 CTSDP07339 412 aaPredicted RBP11.24□□□□□ -0.61
CMTM3-212ENST00000566121 SMIM18P0DKX4 95 aa11.24□□□□□ -0.61
CMTM3-212ENST00000566121 ALDH3B2P48448 385 aa11.24□□□□□ -0.61
CMTM3-212ENST00000566121 STPG3Q8N7X2 389 aa11.24□□□□□ -0.61
CMTM3-212ENST00000566121 CCDC71LQ8N9Z2 235 aa11.24□□□□□ -0.61
CMTM3-212ENST00000566121 DUSP18Q8NEJ0 188 aa11.24□□□□□ -0.61
CMTM3-212ENST00000566121 BCL7BQ9BQE9 202 aa11.24□□□□□ -0.61
CMTM3-212ENST00000566121 GINS3Q9BRX5 216 aa11.24□□□□□ -0.61
CMTM3-212ENST00000566121 C6orf62Q9GZU0 229 aaPredicted RBP11.24□□□□□ -0.61
CMTM3-212ENST00000566121 EXTL2Q9UBQ6 330 aa11.24□□□□□ -0.61
CMTM3-212ENST00000566121 SPRY2O43597 315 aa11.23□□□□□ -0.61
CMTM3-212ENST00000566121 SNCAP37840 140 aa11.23□□□□□ -0.61
CMTM3-212ENST00000566121 MEF2DQ14814 521 aa11.23□□□□□ -0.61
CMTM3-212ENST00000566121 TP53RKQ96S44 253 aa11.23□□□□□ -0.61
CMTM3-212ENST00000566121 RNF2Q99496 336 aa11.23□□□□□ -0.61
CMTM3-212ENST00000566121 C20orf24Q9BUV8 137 aa11.23□□□□□ -0.61
CMTM3-212ENST00000566121 MAP6D1Q9H9H5 199 aa11.23□□□□□ -0.61
CMTM3-212ENST00000566121 COPZ2Q9P299 210 aa11.23□□□□□ -0.61
CMTM3-212ENST00000566121 VPS13DQ5THJ4 4388 aa11.23□□□□□ -0.61
CMTM3-212ENST00000566121 IGHV3-21A0A0B4J1V1 117 aa11.22□□□□□ -0.61
CMTM3-212ENST00000566121 GNG7O60262 68 aa11.22□□□□□ -0.61
CMTM3-212ENST00000566121 DFFBO76075 338 aa11.22□□□□□ -0.61
CMTM3-212ENST00000566121 TMEM50AO95807 157 aa11.22□□□□□ -0.61
CMTM3-212ENST00000566121 PAFAH1B2P68402 229 aa11.22□□□□□ -0.61
CMTM3-212ENST00000566121 STEAP1BQ6NZ63 245 aa11.22□□□□□ -0.61
CMTM3-212ENST00000566121 TOMM20LQ6UXN7 152 aa11.22□□□□□ -0.61
CMTM3-212ENST00000566121 ZNF600Q6ZNG1 722 aa11.22□□□□□ -0.61
CMTM3-212ENST00000566121 UBAC2Q8NBM4 344 aa11.22□□□□□ -0.61
CMTM3-212ENST00000566121 MISP3Q96FF7 219 aa11.22□□□□□ -0.61
CMTM3-212ENST00000566121 NAA50Q9GZZ1 169 aaKnown RBP11.22□□□□□ -0.61
CMTM3-212ENST00000566121 MIXL1Q9H2W2 232 aa11.22□□□□□ -0.61
CMTM3-212ENST00000566121 DNAH10Q8IVF4 4471 aa11.22□□□□□ -0.61
CMTM3-212ENST00000566121 ST8SIA3O43173 380 aa11.21□□□□□ -0.61
CMTM3-212ENST00000566121 RAB3DO95716 219 aa11.21□□□□□ -0.61
CMTM3-212ENST00000566121 PGAM2P15259 253 aa11.21□□□□□ -0.61
CMTM3-212ENST00000566121 SPCS3P61009 180 aa11.21□□□□□ -0.61
CMTM3-212ENST00000566121 TMEM217Q8N7C4 229 aa11.21□□□□□ -0.61
CMTM3-212ENST00000566121 OR4X1Q8NH49 305 aa11.21□□□□□ -0.61
CMTM3-212ENST00000566121 GATAD1Q8WUU5 269 aa11.21□□□□□ -0.61
CMTM3-212ENST00000566121 RRNAD1Q96FB5 475 aaKnown RBP11.21□□□□□ -0.61
CMTM3-212ENST00000566121 MRPS26Q9BYN8 205 aaKnown RBP11.21□□□□□ -0.61
CMTM3-212ENST00000566121 TMEM222Q9H0R3 208 aa11.21□□□□□ -0.61
CMTM3-212ENST00000566121 RNASE2P10153 161 aaKnown RBP11.2□□□□□ -0.62
CMTM3-212ENST00000566121 AKR1C2P52895 323 aa11.2□□□□□ -0.62
CMTM3-212ENST00000566121 DHODHQ02127 395 aa11.2□□□□□ -0.62
CMTM3-212ENST00000566121 SLC35G3Q8N808 338 aa11.2□□□□□ -0.62
CMTM3-212ENST00000566121 OR13C8Q8NGS7 320 aa11.2□□□□□ -0.62
CMTM3-212ENST00000566121 GLYATL2Q8WU03 294 aa11.2□□□□□ -0.62
CMTM3-212ENST00000566121 SMIM4Q8WVI0 70 aa11.2□□□□□ -0.62
CMTM3-212ENST00000566121 PDCD10Q9BUL8 212 aa11.2□□□□□ -0.62
CMTM3-212ENST00000566121 CSTL1Q9H114 145 aa11.2□□□□□ -0.62
CMTM3-212ENST00000566121 TMEM231Q9H6L2 316 aa11.2□□□□□ -0.62
CMTM3-212ENST00000566121 ZFAND3Q9H8U3 227 aa11.2□□□□□ -0.62
CMTM3-212ENST00000566121 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.2□□□□□ -0.62
CMTM3-212ENST00000566121 GPR132Q9UNW8 380 aa11.2□□□□□ -0.62
CMTM3-212ENST00000566121 TRAV30A0A087WSZ9 112 aa11.19□□□□□ -0.62
CMTM3-212ENST00000566121 TEX13DA0A0J9YY54 714 aaPredicted RBP11.19□□□□□ -0.62
CMTM3-212ENST00000566121 A0A1W2PS18 150 aa11.19□□□□□ -0.62
CMTM3-212ENST00000566121 NUPR2A6NF83 97 aa11.19□□□□□ -0.62
CMTM3-212ENST00000566121 CLN5O75503 358 aa11.19□□□□□ -0.62
CMTM3-212ENST00000566121 SCGB2A1O75556 95 aa11.19□□□□□ -0.62
CMTM3-212ENST00000566121 YIF1AO95070 293 aa11.19□□□□□ -0.62
CMTM3-212ENST00000566121 IFNA17P01571 189 aa11.19□□□□□ -0.62
CMTM3-212ENST00000566121 PI3P19957 117 aa11.19□□□□□ -0.62
CMTM3-212ENST00000566121 HTR2BP41595 481 aa11.19□□□□□ -0.62
CMTM3-212ENST00000566121 GPR141Q7Z602 305 aa11.19□□□□□ -0.62
CMTM3-212ENST00000566121 OR4D10Q8NGI6 311 aa11.19□□□□□ -0.62
CMTM3-212ENST00000566121 RAB2BQ8WUD1 216 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms