RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 SGMS2Q8NHU3 365 aa5.4□□□□□ -1.54
LINC01043-201ENST00000565936 SGK494Q96LW2 274 aa5.4□□□□□ -1.54
LINC01043-201ENST00000565936 SRSF8Q9BRL6 282 aaKnown RBP5.4□□□□□ -1.54
LINC01043-201ENST00000565936 CNOT1A5YKK6 2376 aaKnown RBP5.4□□□□□ -1.54
LINC01043-201ENST00000565936 DNAJC13O75165 2243 aa5.4□□□□□ -1.54
LINC01043-201ENST00000565936 ETV2O00321 342 aaPredicted RBP5.4□□□□□ -1.54
LINC01043-201ENST00000565936 NUDT3O95989 172 aa5.4□□□□□ -1.54
LINC01043-201ENST00000565936 OR10S1Q8NGN2 331 aa5.4□□□□□ -1.54
LINC01043-201ENST00000565936 ZFP30Q9Y2G7 519 aa5.4□□□□□ -1.54
LINC01043-201ENST00000565936 PTPRDP23468 1912 aa5.4□□□□□ -1.54
LINC01043-201ENST00000565936 EP300Q09472 2414 aaPredicted RBP5.4□□□□□ -1.54
LINC01043-201ENST00000565936 OVOL1O14753 267 aa5.4□□□□□ -1.54
LINC01043-201ENST00000565936 SNRPEP62304 92 aaKnown RBP5.4□□□□□ -1.54
LINC01043-201ENST00000565936 CIRBPQ14011 172 aaKnown RBP5.4□□□□□ -1.54
LINC01043-201ENST00000565936 ZNF362Q5T0B9 420 aaPredicted RBP5.4□□□□□ -1.54
LINC01043-201ENST00000565936 GAFA1Q96PS6 74 aa5.4□□□□□ -1.54
LINC01043-201ENST00000565936 ASCL2Q99929 193 aa5.4□□□□□ -1.54
LINC01043-201ENST00000565936 OTORQ9NRC9 128 aa5.4□□□□□ -1.54
LINC01043-201ENST00000565936 A0A1B0GW15 77 aa5.4□□□□□ -1.55
LINC01043-201ENST00000565936 M0R3E3 92 aa5.4□□□□□ -1.55
LINC01043-201ENST00000565936 STAG3L2P0CL84 134 aa5.4□□□□□ -1.55
LINC01043-201ENST00000565936 PAQR4Q8N4S7 273 aaPredicted RBP5.4□□□□□ -1.55
LINC01043-201ENST00000565936 OR1P1Q8NH06 330 aa5.4□□□□□ -1.55
LINC01043-201ENST00000565936 Q8TCH9 128 aa5.4□□□□□ -1.55
LINC01043-201ENST00000565936 RNF125Q96EQ8 232 aa5.4□□□□□ -1.55
LINC01043-201ENST00000565936 MCRIP2Q9BUT9 160 aaKnown RBP5.4□□□□□ -1.55
LINC01043-201ENST00000565936 BUB1B-PAK6H3BSN5 160 aa5.4□□□□□ -1.55
LINC01043-201ENST00000565936 BTF3P20290 206 aaKnown RBP5.4□□□□□ -1.55
LINC01043-201ENST00000565936 RPL29P47914 159 aaKnown RBP5.4□□□□□ -1.55
LINC01043-201ENST00000565936 UBE2E1P51965 193 aa5.4□□□□□ -1.55
LINC01043-201ENST00000565936 RPL24P83731 157 aaKnown RBP5.4□□□□□ -1.55
LINC01043-201ENST00000565936 ZNF324BQ6AW86 544 aaPredicted RBP5.4□□□□□ -1.55
LINC01043-201ENST00000565936 TRGV11A0A075B6L2 103 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 TRBV9A0A0B4J1U6 114 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 C7orf77A4D0Y5 90 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 M0R143 59 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 COL8A2P25067 703 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 CRYBB3P26998 211 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 PET117Q6UWS5 81 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 ALKBH7Q9BT30 221 aaPredicted RBP5.39□□□□□ -1.55
LINC01043-201ENST00000565936 C1QTNF4Q9BXJ3 329 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 FAM186AA6NE01 2351 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 J3QRE1 110 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 IGHV3-48P01763 117 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 SRSF9Q13242 221 aaKnown RBP eCLIP5.39□□□□□ -1.55
LINC01043-201ENST00000565936 CIARTQ8N365 385 aaPredicted RBP5.39□□□□□ -1.55
LINC01043-201ENST00000565936 OR1N2Q8NGR9 330 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 IGHV3OR16-13A0A075B7E8 117 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 TRBV6-6A0A0A6YYG2 114 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 IGHV3-74A0A0B4J1X5 117 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 IGHV3-66A0A0C4DH42 116 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 CD8AP01732 235 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 IGFBP2P18065 325 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 C2orf83Q53S99 150 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 FAM74A4Q5TZK3 123 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 LRTM2Q8N967 370 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 ZNF383Q8NA42 475 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 MRPS16Q9Y3D3 137 aaKnown RBP5.39□□□□□ -1.55
LINC01043-201ENST00000565936 IGHV3-49A0A0A0MS15 119 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 PRSS8Q16651 343 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 TMEM42Q69YG0 159 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 OR11H4Q8NGC9 324 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 OR8A1Q8NGG7 326 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 PGLYRP4Q96LB8 373 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 DMRTA2Q96SC8 542 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 GBF1Q92538 1859 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 TMEM250H0YL14 139 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 NAT1P18440 290 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 GATA4P43694 442 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 C5orf64Q2M2E5 130 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 C2orf68Q2NKX9 166 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 GEMIN7Q9H840 131 aaKnown RBP5.39□□□□□ -1.55
LINC01043-201ENST00000565936 ACACAQ13085 2346 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 ICE1Q9Y2F5 2266 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 LOC389332A0A1B0GUA5 103 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 E9PQ18 207 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 ZNF324O75467 553 aaPredicted RBP5.39□□□□□ -1.55
LINC01043-201ENST00000565936 DANCRP0C864 163 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 MPZP25189 248 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 ZNF880Q6PDB4 577 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 NEU1Q99519 415 aa5.39□□□□□ -1.55
LINC01043-201ENST00000565936 RTBDNQ9BSG5 229 aaPredicted RBP5.39□□□□□ -1.55
LINC01043-201ENST00000565936 MBNL3Q9NUK0 354 aaKnown RBP5.39□□□□□ -1.55
LINC01043-201ENST00000565936 SOX21Q9Y651 276 aaPredicted RBP5.39□□□□□ -1.55
LINC01043-201ENST00000565936 HEATR5BQ9P2D3 2071 aa5.38□□□□□ -1.55
LINC01043-201ENST00000565936 C9JCJ5 164 aa5.38□□□□□ -1.55
LINC01043-201ENST00000565936 SNRPCP09234 159 aaKnown RBP5.38□□□□□ -1.55
LINC01043-201ENST00000565936 TDGF1P13385 188 aa5.38□□□□□ -1.55
LINC01043-201ENST00000565936 ZNF585BQ52M93 769 aa5.38□□□□□ -1.55
LINC01043-201ENST00000565936 IGFL2Q6UWQ7 119 aa5.38□□□□□ -1.55
LINC01043-201ENST00000565936 CD177Q8N6Q3 437 aa5.38□□□□□ -1.55
LINC01043-201ENST00000565936 BEND2Q8NDZ0 799 aa5.38□□□□□ -1.55
LINC01043-201ENST00000565936 SLX1AQ9BQ83 275 aa5.38□□□□□ -1.55
LINC01043-201ENST00000565936 PNRC2Q9NPJ4 139 aaKnown RBP5.38□□□□□ -1.55
LINC01043-201ENST00000565936 ZNF319Q9P2F9 582 aa5.38□□□□□ -1.55
LINC01043-201ENST00000565936 ITGB1BP1O14713 200 aa5.38□□□□□ -1.55
LINC01043-201ENST00000565936 VENTXO95231 258 aa5.38□□□□□ -1.55
LINC01043-201ENST00000565936 PRSS2P07478 247 aa5.38□□□□□ -1.55
LINC01043-201ENST00000565936 DEFB121Q5J5C9 76 aa5.38□□□□□ -1.55
LINC01043-201ENST00000565936 LAIR2Q6ISS4 152 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms