RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 PRSS3P35030 304 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 HRH1P35367 487 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 TAS2R46P59540 309 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 PHLDA2Q53GA4 152 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 Q56UQ5 140 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 SNX29P2Q8IUI4 249 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 CMTM1Q8IZ96 169 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 ZNF114Q8NC26 417 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 OR5H2Q8NGV7 314 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 MCFD2Q8NI22 146 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 GPX8Q8TED1 209 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 GALNT14Q96FL9 552 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 SEC22AQ96IW7 307 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 TMEM56Q96MV1 263 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 RHPN1-AS1Q9BWJ2 59 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 SLIRPQ9GZT3 109 aaKnown RBP6.31□□□□□ -1.4
CAPN3-213ENST00000565173 MIXL1Q9H2W2 232 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 FAM212BQ9NTI7 297 aaPredicted RBP6.31□□□□□ -1.4
CAPN3-213ENST00000565173 FKBP11Q9NYL4 201 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 EXTL2Q9UBQ6 330 aa6.31□□□□□ -1.4
CAPN3-213ENST00000565173 IGHV3-49A0A0A0MS15 119 aa6.3□□□□□ -1.4
CAPN3-213ENST00000565173 IGHV3-48P01763 117 aa6.3□□□□□ -1.4
CAPN3-213ENST00000565173 HLA-DMAP28067 261 aa6.3□□□□□ -1.4
CAPN3-213ENST00000565173 MFAP4P55083 255 aa6.3□□□□□ -1.4
CAPN3-213ENST00000565173 RELQ04864 619 aaPredicted RBP6.3□□□□□ -1.4
CAPN3-213ENST00000565173 TBC1D26Q86UD7 250 aa6.3□□□□□ -1.4
CAPN3-213ENST00000565173 LILRB2Q8N423 598 aa6.3□□□□□ -1.4
CAPN3-213ENST00000565173 RPP25LQ8N5L8 163 aaKnown RBP6.3□□□□□ -1.4
CAPN3-213ENST00000565173 TMEM116Q8NCL8 245 aa6.3□□□□□ -1.4
CAPN3-213ENST00000565173 PHLDA1Q8WV24 401 aaPredicted RBP6.3□□□□□ -1.4
CAPN3-213ENST00000565173 TSC22D3Q99576 134 aa6.3□□□□□ -1.4
CAPN3-213ENST00000565173 TXN2Q99757 166 aa6.3□□□□□ -1.4
CAPN3-213ENST00000565173 NXF2Q9GZY0 626 aaKnown RBP6.3□□□□□ -1.4
CAPN3-213ENST00000565173 CSTL1Q9H114 145 aa6.3□□□□□ -1.4
CAPN3-213ENST00000565173 TRAV14DV4A0A0A6YYC5 116 aa6.29□□□□□ -1.4
CAPN3-213ENST00000565173 NUPL2O15504 423 aaKnown RBP6.29□□□□□ -1.4
CAPN3-213ENST00000565173 MT-CO2P00403 227 aa6.29□□□□□ -1.4
CAPN3-213ENST00000565173 APOHP02749 345 aaPredicted RBP6.29□□□□□ -1.4
CAPN3-213ENST00000565173 TFPI2P48307 235 aa6.29□□□□□ -1.4
CAPN3-213ENST00000565173 UCP3P55916 312 aa6.29□□□□□ -1.4
CAPN3-213ENST00000565173 HSPE1P61604 102 aaKnown RBP6.29□□□□□ -1.4
CAPN3-213ENST00000565173 PRCDQ00LT1 54 aa6.29□□□□□ -1.4
CAPN3-213ENST00000565173 RNASE12Q5GAN4 147 aaKnown RBP6.29□□□□□ -1.4
CAPN3-213ENST00000565173 PVRIGQ6DKI7 326 aa6.29□□□□□ -1.4
CAPN3-213ENST00000565173 LPCAT3Q6P1A2 487 aa6.29□□□□□ -1.4
CAPN3-213ENST00000565173 MISP3Q96FF7 219 aa6.29□□□□□ -1.4
CAPN3-213ENST00000565173 DIRAS2Q96HU8 199 aa6.29□□□□□ -1.4
CAPN3-213ENST00000565173 KRTAP17-1Q9BYP8 105 aa6.29□□□□□ -1.4
CAPN3-213ENST00000565173 KLK5Q9Y337 293 aaPredicted RBP6.29□□□□□ -1.4
CAPN3-213ENST00000565173 IGKV3-7A0A075B6H7 116 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 IGHV3OR16-13A0A075B7E8 117 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 IGHV3-74A0A0B4J1X5 117 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 A0A0B4J293 547 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 MPTX1A8MV57 137 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 DEDDO75618 318 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 YIF1AO95070 293 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 P0C879 139 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 S100A5P33763 92 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 CMC4P56277 68 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-213ENST00000565173 IL18Q14116 193 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 IZUMO4Q1ZYL8 232 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 LGALS9CQ6DKI2 356 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 TOMM20LQ6UXN7 152 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 H2BFWTQ7Z2G1 175 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 GBGT1Q8N5D6 347 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 TMEM217Q8N7C4 229 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 OR4A16Q8NH70 328 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 C15orf40Q8WUR7 153 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 GATAD1Q8WUU5 269 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 ST8SIA2Q92186 375 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 MRGPRFQ96AM1 343 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 RARRES2Q99969 163 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 VSIRQ9H7M9 311 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 ZFAND3Q9H8U3 227 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 SCPEP1Q9HB40 452 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 DNAH17Q9UFH2 4485 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 HERC2O95714 4834 aa6.28□□□□□ -1.4
CAPN3-213ENST00000565173 A0A1B0GU03 582 aa6.27□□□□□ -1.41
CAPN3-213ENST00000565173 INS-IGF2F8WCM5 200 aa6.27□□□□□ -1.41
CAPN3-213ENST00000565173 IGKV1-5P01602 117 aa6.27□□□□□ -1.41
CAPN3-213ENST00000565173 TNFSF8P32971 234 aa6.27□□□□□ -1.41
CAPN3-213ENST00000565173 NANOS2P60321 138 aaKnown RBP6.27□□□□□ -1.41
CAPN3-213ENST00000565173 TSPAN5P62079 268 aa6.27□□□□□ -1.41
CAPN3-213ENST00000565173 ERHP84090 104 aaKnown RBP6.27□□□□□ -1.41
CAPN3-213ENST00000565173 TCF24Q7RTU0 167 aa6.27□□□□□ -1.41
CAPN3-213ENST00000565173 FAM24BQ8N5W8 94 aa6.27□□□□□ -1.41
CAPN3-213ENST00000565173 OR11H2Q8NH07 326 aa6.27□□□□□ -1.41
CAPN3-213ENST00000565173 OR52I2Q8NH67 350 aa6.27□□□□□ -1.41
CAPN3-213ENST00000565173 PINX1Q96BK5 328 aaKnown RBP6.27□□□□□ -1.41
CAPN3-213ENST00000565173 ABHD1Q96SE0 405 aa6.27□□□□□ -1.41
CAPN3-213ENST00000565173 MS4A6AQ9H2W1 248 aa6.27□□□□□ -1.41
CAPN3-213ENST00000565173 PKHD1P08F94 4074 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 TRAV2A0A0B4J234 112 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 IGHV3-66A0A0C4DH42 116 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 FABP12A6NFH5 140 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 A6NHS1 94 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 M0QYG6 137 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 GNG7O60262 68 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 DFFBO76075 338 aa6.26□□□□□ -1.41
CAPN3-213ENST00000565173 TMEM50AO95807 157 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms