RNA–Protein interactions for RNA: ENST00000565160.5

BBS4-208, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-208	ENST00000565160	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	3.55	□□□□□ -1.84
BBS4-208	ENST00000565160	COA4	Q9NYJ1	87 aa		3.55	□□□□□ -1.84
BBS4-208	ENST00000565160	PSENEN	Q9NZ42	101 aa		3.55	□□□□□ -1.84
BBS4-208	ENST00000565160	WIPI2	Q9Y4P8	454 aa		3.55	□□□□□ -1.84
BBS4-208	ENST00000565160	FAT2	Q9NYQ8	4349 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	VPS13D	Q5THJ4	4388 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160		A0A087WWC5	75 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	TRAV24	A0A0B4J272	114 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	LCE6A	A0A183	80 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	FAM74A7	A6NL05	159 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160		K7N7A8	449 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	SIRPB1	O00241	398 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	SLC33A1	O00400	549 aa	Predicted RBP	3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	SYNGR1	O43759	233 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	OR2H2	O95918	312 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	MT-CO2	P00403	227 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	TSHB	P01222	138 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	SOD3	P08294	240 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	CFC1B	P0CG36	223 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	CFC1	P0CG37	223 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	PGA5	P0DJD9	388 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	VPREB1	P12018	145 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	CCL2	P13500	99 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	KITLG	P21583	273 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	OMG	P23515	440 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	NFYB	P25208	207 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	MT3	P25713	68 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	S100P	P25815	95 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	ATP6V0C	P27449	155 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	NPBWR1	P48145	328 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	PSMB3	P49720	205 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	RAB7A	P51149	207 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	IDH3G	P51553	393 aa	Predicted RBP	3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	DYNLT3	P51808	116 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	UBE2K	P61086	200 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	RAB31	Q13636	194 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	HFE	Q30201	348 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	ACOT6	Q3I5F7	207 aa	Predicted RBP	3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	TMEM41B	Q5BJD5	291 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	NMS	Q5H8A3	153 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	ZNF506	Q5JVG8	444 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160		Q6P435	159 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	ATRAID	Q6UW56	229 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	H2BFWT	Q7Z2G1	175 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	RTN4RL2	Q86UN3	420 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	CBLN2	Q8IUK8	224 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	OR10P1	Q8NGE3	313 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	NANP	Q8TBE9	248 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	GPR146	Q96CH1	333 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	MUCL1	Q96DR8	90 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	TVP23C	Q96ET8	276 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	WFIKKN1	Q96NZ8	548 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	TMEM147	Q9BVK8	224 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	MAGT1	Q9H0U3	335 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	ENY2	Q9NPA8	101 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	ESM1	Q9NQ30	184 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	CCL28	Q9NRJ3	127 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	SLC39A9	Q9NUM3	307 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	SPRR3	Q9UBC9	169 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	CACNG5	Q9UF02	275 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	PPP1R3C	Q9UQK1	317 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	TIMM9	Q9Y5J7	89 aa		3.54	□□□□□ -1.84
BBS4-208	ENST00000565160	IGSF23	A1L1A6	192 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	C7orf77	A4D0Y5	90 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	RBMY1B	A6NDE4	496 aa	Known RBP	3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	RBMY1E	A6NEQ0	496 aa	Known RBP	3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	CEBPZOS	A8MTT3	80 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	CDIPT	O14735	213 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	RAB29	O14966	203 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	CYB5B	O43169	146 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	TXNL1	O43396	289 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	TNFSF12	O43508	249 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	NDUFA2	O43678	99 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	MPDU1	O75352	247 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	CST7	O76096	145 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	AMBP	P02760	352 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	CRYBA1	P05813	215 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	RBMY1D	P0C7P1	496 aa	Known RBP	3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	SMIM6	P0DI80	62 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	OR13C7	P0DN81	318 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	PSG2	P11465	335 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	IRF2	P14316	349 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	ADCYAP1	P18509	176 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	RAB5A	P20339	215 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	COX5A	P20674	150 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	ANOS1	P23352	680 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	MC5R	P33032	325 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	CDKN1A	P38936	164 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	WNT5A	P41221	380 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	GABRA2	P47869	451 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	ATP5I	P56385	69 aa	Predicted RBP	3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	HILS1	P60008	231 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	ERVK11-1	P61568	191 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	RAB11A	P62491	216 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	RPL19	P84098	196 aa	Known RBP	3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	HTD2	P86397	168 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	SLC38A11	Q08AI6	406 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	SPANXN5	Q5MJ07	72 aa		3.53	□□□□□ -1.84
BBS4-208	ENST00000565160	SPATA46	Q5T0L3	261 aa		3.53	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms