RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 OR4C5Q8NGB2 326 aa16.83■□□□□ 0.28
MAP1LC3B-206ENST00000564844 OR52E5Q8NH55 327 aa16.83■□□□□ 0.28
MAP1LC3B-206ENST00000564844 C18orf32Q8TCD1 76 aa16.83■□□□□ 0.28
MAP1LC3B-206ENST00000564844 CORTO00230 105 aa16.82■□□□□ 0.28
MAP1LC3B-206ENST00000564844 NTN3O00634 580 aaPredicted RBP16.82■□□□□ 0.28
MAP1LC3B-206ENST00000564844 PYYP10082 97 aa16.82■□□□□ 0.28
MAP1LC3B-206ENST00000564844 RNFT1Q5M7Z0 435 aa16.82■□□□□ 0.28
MAP1LC3B-206ENST00000564844 OR4A47Q6IF82 309 aa16.82■□□□□ 0.28
MAP1LC3B-206ENST00000564844 TCTEX1D1Q8N7M0 179 aa16.82■□□□□ 0.28
MAP1LC3B-206ENST00000564844 ALKBH7Q9BT30 221 aaPredicted RBP16.82■□□□□ 0.28
MAP1LC3B-206ENST00000564844 SPTA1P02549 2419 aa16.82■□□□□ 0.28
MAP1LC3B-206ENST00000564844 AMY1AP04745 511 aa16.82■□□□□ 0.28
MAP1LC3B-206ENST00000564844 CYC1P08574 325 aa16.82■□□□□ 0.28
MAP1LC3B-206ENST00000564844 GDF5OSQ5U4N7 250 aa16.82■□□□□ 0.28
MAP1LC3B-206ENST00000564844 CBY3A6NI87 242 aa16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 C15orf65H3BRN8 121 aa16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 DUX4L9Q6RFH8 374 aaPredicted RBP16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 OR10W1Q8NGF6 305 aa16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 OR2D3Q8NGH3 330 aa16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 C22orf15Q8WYQ4 148 aa16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 PMCHL2Q9BQD1 86 aa16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 BET1LQ9NYM9 111 aa16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 ARL2-SNX15V9GYD0 113 aa16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 C9JCJ5 164 aa16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 CRYABP02511 175 aaKnown RBP16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 LINC00869P0C866 280 aa16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 LOXL4Q96JB6 756 aa16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 H3BTX0 84 aa16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 SP1P08047 785 aa16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 WDR73Q6P4I2 378 aa16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 LINC00173Q6ZV60 143 aa16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 RND1Q92730 232 aa16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 TXNDC17Q9BRA2 123 aa16.81■□□□□ 0.28
MAP1LC3B-206ENST00000564844 TCTAP57738 103 aa16.8■□□□□ 0.28
MAP1LC3B-206ENST00000564844 ZNF738Q8NE65 137 aa16.8■□□□□ 0.28
MAP1LC3B-206ENST00000564844 OR8B2Q96RD0 313 aa16.8■□□□□ 0.28
MAP1LC3B-206ENST00000564844 LOC105371242A0A075B767 164 aa16.8■□□□□ 0.28
MAP1LC3B-206ENST00000564844 LNP1A1A4G5 178 aa16.8■□□□□ 0.28
MAP1LC3B-206ENST00000564844 SPACA3Q8IXA5 215 aa16.8■□□□□ 0.28
MAP1LC3B-206ENST00000564844 KLHDC1Q8N7A1 406 aa16.8■□□□□ 0.28
MAP1LC3B-206ENST00000564844 NKX6-3A6NJ46 265 aa16.79■□□□□ 0.28
MAP1LC3B-206ENST00000564844 SNAI2O43623 268 aa16.79■□□□□ 0.28
MAP1LC3B-206ENST00000564844 IGLV2-8P01709 118 aa16.79■□□□□ 0.28
MAP1LC3B-206ENST00000564844 GNG5P63218 68 aa16.79■□□□□ 0.28
MAP1LC3B-206ENST00000564844 SPRR3Q9UBC9 169 aa16.79■□□□□ 0.28
MAP1LC3B-206ENST00000564844 COX11Q9Y6N1 276 aa16.79■□□□□ 0.28
MAP1LC3B-206ENST00000564844 PTPRBP23467 1997 aa16.79■□□□□ 0.28
MAP1LC3B-206ENST00000564844 hDV102S1A0JD36 115 aa16.79■□□□□ 0.28
MAP1LC3B-206ENST00000564844 UBE2V1Q13404 147 aa16.79■□□□□ 0.28
MAP1LC3B-206ENST00000564844 TMEM249Q2WGJ8 235 aa16.79■□□□□ 0.28
MAP1LC3B-206ENST00000564844 MPV17L2Q567V2 206 aa16.79■□□□□ 0.28
MAP1LC3B-206ENST00000564844 OR10J3Q5JRS4 329 aa16.79■□□□□ 0.28
MAP1LC3B-206ENST00000564844 OR2T6Q8NHC8 308 aa16.79■□□□□ 0.28
MAP1LC3B-206ENST00000564844 NEUROG1Q92886 237 aa16.79■□□□□ 0.28
MAP1LC3B-206ENST00000564844 HES4Q9HCC6 221 aa16.79■□□□□ 0.28
MAP1LC3B-206ENST00000564844 MED13LQ71F56 2210 aa16.79■□□□□ 0.28
MAP1LC3B-206ENST00000564844 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.78■□□□□ 0.28
MAP1LC3B-206ENST00000564844 IQCF6A8MYZ5 107 aa16.78■□□□□ 0.28
MAP1LC3B-206ENST00000564844 AREGP15514 252 aa16.78■□□□□ 0.28
MAP1LC3B-206ENST00000564844 SMIM21Q3B7S5 101 aa16.78■□□□□ 0.28
MAP1LC3B-206ENST00000564844 ZNF137PP52743 207 aa16.78■□□□□ 0.28
MAP1LC3B-206ENST00000564844 ZNF138P52744 262 aa16.78■□□□□ 0.28
MAP1LC3B-206ENST00000564844 C11orf52Q96A22 123 aa16.78■□□□□ 0.28
MAP1LC3B-206ENST00000564844 WASHC3Q9Y3C0 194 aa16.78■□□□□ 0.28
MAP1LC3B-206ENST00000564844 LAMTOR5O43504 91 aa16.78■□□□□ 0.28
MAP1LC3B-206ENST00000564844 CA7P43166 264 aa16.78■□□□□ 0.28
MAP1LC3B-206ENST00000564844 UBE2L3P68036 154 aaKnown RBP16.78■□□□□ 0.28
MAP1LC3B-206ENST00000564844 SSBP2P81877 361 aaPredicted RBP16.78■□□□□ 0.28
MAP1LC3B-206ENST00000564844 MRPL52Q86TS9 123 aaKnown RBP16.78■□□□□ 0.28
MAP1LC3B-206ENST00000564844 IFI27L2Q9H2X8 130 aa16.78■□□□□ 0.28
MAP1LC3B-206ENST00000564844 FAM181BA6NEQ2 426 aa16.77■□□□□ 0.28
MAP1LC3B-206ENST00000564844 J3QR06 171 aa16.77■□□□□ 0.28
MAP1LC3B-206ENST00000564844 HLA-DQA1P01909 254 aa16.77■□□□□ 0.28
MAP1LC3B-206ENST00000564844 RPL19P84098 196 aaKnown RBP16.77■□□□□ 0.28
MAP1LC3B-206ENST00000564844 FBLN7Q53RD9 439 aa16.77■□□□□ 0.28
MAP1LC3B-206ENST00000564844 OR51B2Q9Y5P1 312 aa16.77■□□□□ 0.28
MAP1LC3B-206ENST00000564844 CACNA1BQ00975 2339 aa16.77■□□□□ 0.28
MAP1LC3B-206ENST00000564844 IGKV1D-17A0A075B6S4 117 aa16.77■□□□□ 0.27
MAP1LC3B-206ENST00000564844 MT-ND6P03923 174 aa16.77■□□□□ 0.27
MAP1LC3B-206ENST00000564844 IGKV1-16P04430 117 aa16.77■□□□□ 0.27
MAP1LC3B-206ENST00000564844 TCF24Q7RTU0 167 aa16.77■□□□□ 0.27
MAP1LC3B-206ENST00000564844 DUSP3P51452 185 aaPredicted RBP16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 HSPE1P61604 102 aaKnown RBP16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 PRR20EP86478 221 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 PRR20CP86479 221 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 PRR20DP86480 221 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 PRR20BP86481 221 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 PRR20AP86496 221 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 TRIB1Q96RU8 372 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 CXXC4Q9H2H0 198 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 TRAV9-1A0A075B6T8 112 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 SAA2-SAA4A0A096LPE2 208 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 TRBV9A0A0B4J1U6 114 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 C15orf61A6NNL5 157 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 C9orf172C9J069 976 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 TOX4O94842 621 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 SAA2P0DJI9 122 aaPredicted RBP16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 ZNF841Q6ZN19 808 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 NUP35Q8NFH5 326 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 BLNKQ8WV28 456 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms