RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 C12orf74Q32Q52 190 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 ARHGAP11BQ3KRB8 267 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 ZNF676Q8N7Q3 588 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 OR5B17Q8NGF7 314 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 OR8B3Q8NGG8 313 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 OR52L1Q8NGH7 329 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 OR2T4Q8NH00 348 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 ACOT12Q8WYK0 555 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 DCUN1D1Q96GG9 259 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 ZNF625Q96I27 306 aaPredicted RBP0.73□□□□□ -2.29
CHD9-211ENST00000564600 PPP1R2P1Q96PQ5 205 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 RETNLBQ9BQ08 111 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 NAA38Q9BRA0 125 aaKnown RBP0.73□□□□□ -2.29
CHD9-211ENST00000564600 OR51V1Q9H2C8 321 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 IDI2-AS1Q9NZ38 188 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 FBXO5Q9UKT4 447 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 BAIAP2Q9UQB8 552 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 EIF3AQ14152 1382 aaKnown RBP0.72□□□□□ -2.29
CHD9-211ENST00000564600 ZFHX2Q9C0A1 2572 aaPredicted RBP0.72□□□□□ -2.29
CHD9-211ENST00000564600 DENND4CQ5VZ89 1909 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 HECW2Q9P2P5 1572 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 TRGV2A0A075B6R0 118 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 A0A0D9SG52 128 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 EXOC1LA0A1B0GW35 172 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 hADV38S2A0JD32 116 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 DPRXA6NFQ7 191 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 OR4C46A6NHA9 309 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 RFPL4AA6NLU0 287 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 TMEM114B3SHH9 223 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 RFPL4AL1F8VTS6 287 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 J3QRK9 145 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 CNIH1O95406 144 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 TCL1BO95988 128 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 CST2P09228 141 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 MIFP14174 115 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 GPX2P18283 190 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 ARF6P62330 175 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 HBA1P69905 142 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 ELOBQ15370 118 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 MOGQ16653 247 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 AADACL3Q5VUY0 350 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 C8orf74Q6P047 294 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 PACRGLQ8N7B6 248 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 GDPD1Q8N9F7 314 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 ZNF439Q8NDP4 499 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 OR4D11Q8NGI4 311 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 CT55Q8WUE5 264 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 H1FXQ92522 213 aaKnown RBP0.72□□□□□ -2.29
CHD9-211ENST00000564600 TRIM4Q9C037 500 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 YIPF3Q9GZM5 350 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 RGS12O14924 1447 aa0.72□□□□□ -2.29
CHD9-211ENST00000564600 PCF11O94913 1555 aaKnown RBP0.71□□□□□ -2.3
CHD9-211ENST00000564600 TRAV9-1A0A075B6T8 112 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 A0A1B0GVG6 124 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 BUB1B-PAK6H3BSN5 160 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 OR7C1O76099 320 aaPredicted RBP0.71□□□□□ -2.3
CHD9-211ENST00000564600 SERPINE1P05121 402 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 HTR1AP08908 422 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 RNASE3P12724 160 aaKnown RBP0.71□□□□□ -2.3
CHD9-211ENST00000564600 SUPT4H1P63272 117 aaKnown RBP0.71□□□□□ -2.3
CHD9-211ENST00000564600 ZNF345Q14585 488 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 SPA17Q15506 151 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 NNATQ16517 81 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 MIR17HGQ75NE6 70 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 MCFD2Q8NI22 146 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 ITFG2Q969R8 447 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 SCGB3A1Q96QR1 104 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 CMSS1Q9BQ75 279 aaKnown RBP0.71□□□□□ -2.3
CHD9-211ENST00000564600 TMEM133Q9H2Q1 129 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 CMTM6Q9NX76 183 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 GLTPQ9NZD2 209 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 CKLFQ9UBR5 152 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 TP73-AS1Q9UF72 201 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 NAT8Q9UHE5 227 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 ZNF106Q9H2Y7 1883 aaKnown RBP0.71□□□□□ -2.3
CHD9-211ENST00000564600 CUL9Q8IWT3 2517 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 CCDC144AA2RUR9 1427 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 FMN1Q68DA7 1419 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 COL6A3P12111 3177 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 KIF1BO60333 1816 aa0.71□□□□□ -2.3
CHD9-211ENST00000564600 SDK1Q7Z5N4 2213 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 KIF24Q5T7B8 1368 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 UBR2Q8IWV8 1755 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 AHNAKQ09666 5890 aaKnown RBP0.7□□□□□ -2.3
CHD9-211ENST00000564600 FAM236DA0A1B0GTK5 79 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 FUOMA2VDF0 154 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 SDCBPO00560 298 aaPredicted RBP0.7□□□□□ -2.3
CHD9-211ENST00000564600 IFNA6P05013 189 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 CTSDP07339 412 aaPredicted RBP0.7□□□□□ -2.3
CHD9-211ENST00000564600 RPS17P08708 135 aaKnown RBP0.7□□□□□ -2.3
CHD9-211ENST00000564600 RPSAP08865 295 aaKnown RBP0.7□□□□□ -2.3
CHD9-211ENST00000564600 TRGC1P0CF51 173 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 FAM236CP0DP71 79 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 RPS4Y1P22090 263 aaKnown RBP0.7□□□□□ -2.3
CHD9-211ENST00000564600 PPIBP23284 216 aaKnown RBP0.7□□□□□ -2.3
CHD9-211ENST00000564600 CAPZBP47756 277 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 RPS20P60866 119 aaKnown RBP0.7□□□□□ -2.3
CHD9-211ENST00000564600 CDC42P60953 191 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 YPEL3P61236 119 aaPredicted RBP0.7□□□□□ -2.3
CHD9-211ENST00000564600 RUNX1Q01196 453 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms