RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 OR2T8A6NH00 312 aa10.17□□□□□ -0.78
CLK3-216ENST00000564468 A8MWP6 167 aa10.17□□□□□ -0.78
CLK3-216ENST00000564468 K7EIM0 57 aa10.17□□□□□ -0.78
CLK3-216ENST00000564468 FOLR2P14207 255 aa10.17□□□□□ -0.78
CLK3-216ENST00000564468 ELLP55199 621 aaPredicted RBP10.17□□□□□ -0.78
CLK3-216ENST00000564468 SPCS3P61009 180 aa10.17□□□□□ -0.78
CLK3-216ENST00000564468 TMEM187Q14656 261 aa10.17□□□□□ -0.78
CLK3-216ENST00000564468 Q56UQ5 140 aa10.17□□□□□ -0.78
CLK3-216ENST00000564468 GTSCR1Q86UQ5 136 aa10.17□□□□□ -0.78
CLK3-216ENST00000564468 LGI3Q8N145 548 aa10.17□□□□□ -0.78
CLK3-216ENST00000564468 LHFPL5Q8TAF8 219 aa10.17□□□□□ -0.78
CLK3-216ENST00000564468 TMEM230Q96A57 120 aa10.17□□□□□ -0.78
CLK3-216ENST00000564468 ZNF436Q9C0F3 470 aaPredicted RBP10.17□□□□□ -0.78
CLK3-216ENST00000564468 IGHV3-21A0A0B4J1V1 117 aa10.16□□□□□ -0.78
CLK3-216ENST00000564468 CENPXA8MT69 81 aa10.16□□□□□ -0.78
CLK3-216ENST00000564468 NUPL2O15504 423 aaKnown RBP10.16□□□□□ -0.78
CLK3-216ENST00000564468 CBLN1P23435 193 aa10.16□□□□□ -0.78
CLK3-216ENST00000564468 FCGR2BP31994 310 aaPredicted RBP10.16□□□□□ -0.78
CLK3-216ENST00000564468 RELQ04864 619 aaPredicted RBP10.16□□□□□ -0.78
CLK3-216ENST00000564468 AARDQ4LEZ3 155 aa10.16□□□□□ -0.78
CLK3-216ENST00000564468 TMEM128Q5BJH2 165 aa10.16□□□□□ -0.78
CLK3-216ENST00000564468 SPINK9Q5DT21 86 aa10.16□□□□□ -0.78
CLK3-216ENST00000564468 UBAC2Q8NBM4 344 aa10.16□□□□□ -0.78
CLK3-216ENST00000564468 ZC4H2Q9NQZ6 224 aa10.16□□□□□ -0.78
CLK3-216ENST00000564468 MRPL27Q9P0M9 148 aaKnown RBP10.16□□□□□ -0.78
CLK3-216ENST00000564468 CACNG5Q9UF02 275 aa10.16□□□□□ -0.78
CLK3-216ENST00000564468 A0A0B4J2A0 478 aa10.15□□□□□ -0.78
CLK3-216ENST00000564468 A0A0G2JRQ6 117 aa10.15□□□□□ -0.78
CLK3-216ENST00000564468 DUXBA0A1W2PPF3 345 aa10.15□□□□□ -0.78
CLK3-216ENST00000564468 I3L2K1 104 aa10.15□□□□□ -0.78
CLK3-216ENST00000564468 NDUFA4O00483 81 aa10.15□□□□□ -0.78
CLK3-216ENST00000564468 MT-CO2P00403 227 aa10.15□□□□□ -0.78
CLK3-216ENST00000564468 SULT1A3P0DMM9 295 aa10.15□□□□□ -0.78
CLK3-216ENST00000564468 SULT1A4P0DMN0 295 aa10.15□□□□□ -0.78
CLK3-216ENST00000564468 NPBWR1P48145 328 aa10.15□□□□□ -0.78
CLK3-216ENST00000564468 RBMS2Q15434 407 aaKnown RBP10.15□□□□□ -0.78
CLK3-216ENST00000564468 DEFB114Q30KQ6 69 aa10.15□□□□□ -0.78
CLK3-216ENST00000564468 CD300EQ496F6 205 aaPredicted RBP10.15□□□□□ -0.78
CLK3-216ENST00000564468 Q6ZRM9 215 aa10.15□□□□□ -0.78
CLK3-216ENST00000564468 TMED4Q7Z7H5 227 aa10.15□□□□□ -0.78
CLK3-216ENST00000564468 DUSP18Q8NEJ0 188 aa10.15□□□□□ -0.78
CLK3-216ENST00000564468 PINX1Q96BK5 328 aaKnown RBP10.15□□□□□ -0.78
CLK3-216ENST00000564468 GPR146Q96CH1 333 aa10.15□□□□□ -0.78
CLK3-216ENST00000564468 SHPKQ9UHJ6 478 aa10.15□□□□□ -0.78
CLK3-216ENST00000564468 TMEM213A2RRL7 107 aa10.14□□□□□ -0.79
CLK3-216ENST00000564468 GNG7O60262 68 aa10.14□□□□□ -0.79
CLK3-216ENST00000564468 SCGB2A1O75556 95 aa10.14□□□□□ -0.79
CLK3-216ENST00000564468 HTR2BP41595 481 aa10.14□□□□□ -0.79
CLK3-216ENST00000564468 CCR6P51684 374 aa10.14□□□□□ -0.79
CLK3-216ENST00000564468 SUPT4H1P63272 117 aaKnown RBP10.14□□□□□ -0.79
CLK3-216ENST00000564468 C11orf87Q6NUJ2 197 aa10.14□□□□□ -0.79
CLK3-216ENST00000564468 ADAMTSL5Q6ZMM2 481 aa10.14□□□□□ -0.79
CLK3-216ENST00000564468 NOXA1Q86UR1 476 aa10.14□□□□□ -0.79
CLK3-216ENST00000564468 CENPSQ8N2Z9 138 aa10.14□□□□□ -0.79
CLK3-216ENST00000564468 UXS1Q8NBZ7 420 aa10.14□□□□□ -0.79
CLK3-216ENST00000564468 TMEM190Q8WZ59 177 aa10.14□□□□□ -0.79
CLK3-216ENST00000564468 C7orf50Q9BRJ6 194 aaKnown RBP10.14□□□□□ -0.79
CLK3-216ENST00000564468 HIPK2Q9H2X6 1198 aa10.14□□□□□ -0.79
CLK3-216ENST00000564468 HEYLQ9NQ87 328 aaPredicted RBP10.14□□□□□ -0.79
CLK3-216ENST00000564468 IGHV3-35A0A0C4DH35 117 aa10.13□□□□□ -0.79
CLK3-216ENST00000564468 CEBPZOSA8MTT3 80 aa10.13□□□□□ -0.79
CLK3-216ENST00000564468 A8MZ25 164 aa10.13□□□□□ -0.79
CLK3-216ENST00000564468 K7EMT4 169 aa10.13□□□□□ -0.79
CLK3-216ENST00000564468 CTSGP08311 255 aa10.13□□□□□ -0.79
CLK3-216ENST00000564468 C8orf88P0DMB2 117 aa10.13□□□□□ -0.79
CLK3-216ENST00000564468 RNASE2P10153 161 aaKnown RBP10.13□□□□□ -0.79
CLK3-216ENST00000564468 VAMP1P23763 118 aa10.13□□□□□ -0.79
CLK3-216ENST00000564468 UBE2MP61081 183 aaKnown RBP10.13□□□□□ -0.79
CLK3-216ENST00000564468 SMCO1Q147U7 214 aa10.13□□□□□ -0.79
CLK3-216ENST00000564468 BAK1Q16611 211 aa10.13□□□□□ -0.79
CLK3-216ENST00000564468 TM4SF20Q53R12 229 aa10.13□□□□□ -0.79
CLK3-216ENST00000564468 UNQ9165/PRO28630Q6UXU0 137 aa10.13□□□□□ -0.79
CLK3-216ENST00000564468 Q8N1Y9 231 aa10.13□□□□□ -0.79
CLK3-216ENST00000564468 CHRDL1Q9BU40 450 aa10.13□□□□□ -0.79
CLK3-216ENST00000564468 DAZ1Q9NQZ3 744 aaKnown RBP10.13□□□□□ -0.79
CLK3-216ENST00000564468 TRAV25A0A0B4J276 109 aa10.12□□□□□ -0.79
CLK3-216ENST00000564468 A0A1B0GU03 582 aa10.12□□□□□ -0.79
CLK3-216ENST00000564468 RPS10-NUDT3A0A1W2PQS6 291 aa10.12□□□□□ -0.79
CLK3-216ENST00000564468 IZUMO1RA6ND01 250 aa10.12□□□□□ -0.79
CLK3-216ENST00000564468 F8W735 103 aaPredicted RBP10.12□□□□□ -0.79
CLK3-216ENST00000564468 FRMD6-AS1P0C7T7 363 aa10.12□□□□□ -0.79
CLK3-216ENST00000564468 GUCA2BQ16661 112 aa10.12□□□□□ -0.79
CLK3-216ENST00000564468 CNPY1Q3B7I2 92 aa10.12□□□□□ -0.79
CLK3-216ENST00000564468 ANKRD55Q3KP44 614 aa10.12□□□□□ -0.79
CLK3-216ENST00000564468 NMSQ5H8A3 153 aa10.12□□□□□ -0.79
CLK3-216ENST00000564468 PVRIGQ6DKI7 326 aa10.12□□□□□ -0.79
CLK3-216ENST00000564468 LINC00299Q6ZSB3 139 aa10.12□□□□□ -0.79
CLK3-216ENST00000564468 LYZL2Q7Z4W2 148 aa10.12□□□□□ -0.79
CLK3-216ENST00000564468 C20orf24Q9BUV8 137 aa10.12□□□□□ -0.79
CLK3-216ENST00000564468 C15orf62A8K5M9 175 aa10.11□□□□□ -0.79
CLK3-216ENST00000564468 ZNF785A8K8V0 405 aa10.11□□□□□ -0.79
CLK3-216ENST00000564468 SFT2D2O95562 160 aa10.11□□□□□ -0.79
CLK3-216ENST00000564468 IGHV4-30-4P0DP06 118 aa10.11□□□□□ -0.79
CLK3-216ENST00000564468 ADMP35318 185 aa10.11□□□□□ -0.79
CLK3-216ENST00000564468 OPRK1P41145 380 aa10.11□□□□□ -0.79
CLK3-216ENST00000564468 BSXQ3C1V8 233 aa10.11□□□□□ -0.79
CLK3-216ENST00000564468 C2orf83Q53S99 150 aa10.11□□□□□ -0.79
CLK3-216ENST00000564468 LAMTOR1Q6IAA8 161 aa10.11□□□□□ -0.79
CLK3-216ENST00000564468 RBPMS2Q6ZRY4 209 aaKnown RBP10.11□□□□□ -0.79
CLK3-216ENST00000564468 SLC16A13Q7RTY0 426 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms