RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 PRR13Q9NZ81 148 aa12.86□□□□□ -0.35
RNF40-206ENST00000564260 DMRT1Q9Y5R6 373 aa12.86□□□□□ -0.35
RNF40-206ENST00000564260 FBN3Q75N90 2809 aa12.86□□□□□ -0.35
RNF40-206ENST00000564260 CEBPZOSA8MTT3 80 aa12.85□□□□□ -0.35
RNF40-206ENST00000564260 SNRPGP15A8MWD9 76 aa12.85□□□□□ -0.35
RNF40-206ENST00000564260 GGCTO75223 188 aaKnown RBP12.85□□□□□ -0.35
RNF40-206ENST00000564260 HOXB5P09067 269 aa12.85□□□□□ -0.35
RNF40-206ENST00000564260 HOXD3P31249 432 aaPredicted RBP12.85□□□□□ -0.35
RNF40-206ENST00000564260 C2orf83Q53S99 150 aa12.85□□□□□ -0.35
RNF40-206ENST00000564260 ZNF502Q8TBZ5 544 aa12.85□□□□□ -0.35
RNF40-206ENST00000564260 RNASEH2CQ8TDP1 164 aaKnown RBP12.85□□□□□ -0.35
RNF40-206ENST00000564260 BSCL2Q96G97 398 aaPredicted RBP12.85□□□□□ -0.35
RNF40-206ENST00000564260 SCGB2A1O75556 95 aa12.84□□□□□ -0.35
RNF40-206ENST00000564260 RNASE2P10153 161 aaKnown RBP12.84□□□□□ -0.35
RNF40-206ENST00000564260 RPP30P78346 268 aaKnown RBP12.84□□□□□ -0.35
RNF40-206ENST00000564260 KLF5Q13887 457 aaPredicted RBP12.84□□□□□ -0.35
RNF40-206ENST00000564260 RPEL1Q2QD12 228 aa12.84□□□□□ -0.35
RNF40-206ENST00000564260 KPRPQ5T749 579 aaPredicted RBP12.84□□□□□ -0.35
RNF40-206ENST00000564260 SAMD5Q5TGI4 173 aa12.84□□□□□ -0.35
RNF40-206ENST00000564260 SLC24A4Q8NFF2 622 aa12.84□□□□□ -0.35
RNF40-206ENST00000564260 DTD1Q8TEA8 209 aa12.84□□□□□ -0.35
RNF40-206ENST00000564260 CCDC140Q96MF4 163 aa12.84□□□□□ -0.35
RNF40-206ENST00000564260 C21orf62Q9NYP8 219 aa12.84□□□□□ -0.35
RNF40-206ENST00000564260 RPS10-NUDT3A0A1W2PQS6 291 aa12.83□□□□□ -0.36
RNF40-206ENST00000564260 INMT-MINDY4F8WBC2 141 aa12.83□□□□□ -0.36
RNF40-206ENST00000564260 I3L2K1 104 aa12.83□□□□□ -0.36
RNF40-206ENST00000564260 K7EIM0 57 aa12.83□□□□□ -0.36
RNF40-206ENST00000564260 OVOL1O14753 267 aa12.83□□□□□ -0.36
RNF40-206ENST00000564260 MFAP2P55001 183 aa12.83□□□□□ -0.36
RNF40-206ENST00000564260 C9orf66Q5T8R8 295 aa12.83□□□□□ -0.36
RNF40-206ENST00000564260 C19orf35Q6ZS72 473 aa12.83□□□□□ -0.36
RNF40-206ENST00000564260 GPHB5Q86YW7 130 aa12.83□□□□□ -0.36
RNF40-206ENST00000564260 C1QL4Q86Z23 238 aa12.83□□□□□ -0.36
RNF40-206ENST00000564260 C12orf45Q8N5I9 185 aaPredicted RBP12.83□□□□□ -0.36
RNF40-206ENST00000564260 SCARB1Q8WTV0 552 aa12.83□□□□□ -0.36
RNF40-206ENST00000564260 DUX3Q96PT4 197 aa12.83□□□□□ -0.36
RNF40-206ENST00000564260 ELOVL1Q9BW60 279 aa12.83□□□□□ -0.36
RNF40-206ENST00000564260 SIGLEC8Q9NYZ4 499 aa12.83□□□□□ -0.36
RNF40-206ENST00000564260 CMYA5Q8N3K9 4069 aa12.83□□□□□ -0.36
RNF40-206ENST00000564260 ANKRD34BA5PLL1 514 aa12.82□□□□□ -0.36
RNF40-206ENST00000564260 MFSD2BA6NFX1 497 aa12.82□□□□□ -0.36
RNF40-206ENST00000564260 LGALS9O00182 355 aa12.82□□□□□ -0.36
RNF40-206ENST00000564260 BMPR1BO00238 502 aa12.82□□□□□ -0.36
RNF40-206ENST00000564260 NPY1RP25929 384 aa12.82□□□□□ -0.36
RNF40-206ENST00000564260 ARL3P36405 182 aa12.82□□□□□ -0.36
RNF40-206ENST00000564260 NPBWR1P48145 328 aa12.82□□□□□ -0.36
RNF40-206ENST00000564260 MFAP4P55083 255 aa12.82□□□□□ -0.36
RNF40-206ENST00000564260 ID3Q02535 119 aa12.82□□□□□ -0.36
RNF40-206ENST00000564260 ETFRF1Q6IPR1 90 aa12.82□□□□□ -0.36
RNF40-206ENST00000564260 PEMTQ9UBM1 199 aa12.82□□□□□ -0.36
RNF40-206ENST00000564260 SYNGR2O43760 224 aa12.81□□□□□ -0.36
RNF40-206ENST00000564260 ADAP1O75689 374 aa12.81□□□□□ -0.36
RNF40-206ENST00000564260 CLEC3BP05452 202 aa12.81□□□□□ -0.36
RNF40-206ENST00000564260 SLC25A4P12235 298 aa12.81□□□□□ -0.36
RNF40-206ENST00000564260 NKX2-1P43699 371 aaPredicted RBP12.81□□□□□ -0.36
RNF40-206ENST00000564260 FAM106AQ4KMX7 169 aa12.81□□□□□ -0.36
RNF40-206ENST00000564260 SPINK9Q5DT21 86 aa12.81□□□□□ -0.36
RNF40-206ENST00000564260 ACSM6Q6P461 480 aa12.81□□□□□ -0.36
RNF40-206ENST00000564260 REC114Q7Z4M0 266 aa12.81□□□□□ -0.36
RNF40-206ENST00000564260 OR52B4Q8NGK2 314 aa12.81□□□□□ -0.36
RNF40-206ENST00000564260 OR4D5Q8NGN0 318 aa12.81□□□□□ -0.36
RNF40-206ENST00000564260 DCUN1D4Q92564 292 aa12.81□□□□□ -0.36
RNF40-206ENST00000564260 DLX4Q92988 240 aaPredicted RBP12.81□□□□□ -0.36
RNF40-206ENST00000564260 MISP3Q96FF7 219 aa12.81□□□□□ -0.36
RNF40-206ENST00000564260 RBKSQ9H477 322 aa12.81□□□□□ -0.36
RNF40-206ENST00000564260 NBEAL1Q6ZS30 2694 aa12.81□□□□□ -0.36
RNF40-206ENST00000564260 TGOLN2O43493 480 aa12.8□□□□□ -0.36
RNF40-206ENST00000564260 MT-CO2P00403 227 aa12.8□□□□□ -0.36
RNF40-206ENST00000564260 SLURP1P55000 103 aa12.8□□□□□ -0.36
RNF40-206ENST00000564260 DEFA5Q01523 94 aa12.8□□□□□ -0.36
RNF40-206ENST00000564260 RELQ04864 619 aaPredicted RBP12.8□□□□□ -0.36
RNF40-206ENST00000564260 DCTN2Q13561 401 aaKnown RBP12.8□□□□□ -0.36
RNF40-206ENST00000564260 IAH1Q2TAA2 248 aaPredicted RBP12.8□□□□□ -0.36
RNF40-206ENST00000564260 CLEC19AQ6UXS0 136 aa12.8□□□□□ -0.36
RNF40-206ENST00000564260 OR9G4Q8NGQ1 327 aa12.8□□□□□ -0.36
RNF40-206ENST00000564260 SEC22CQ9BRL7 303 aa12.8□□□□□ -0.36
RNF40-206ENST00000564260 SEC14L6B5MCN3 397 aa12.79□□□□□ -0.36
RNF40-206ENST00000564260 WRBO00258 174 aa12.79□□□□□ -0.36
RNF40-206ENST00000564260 NUPL2O15504 423 aaKnown RBP12.79□□□□□ -0.36
RNF40-206ENST00000564260 IFNA10P01566 189 aa12.79□□□□□ -0.36
RNF40-206ENST00000564260 TRBV12-3P01733 135 aa12.79□□□□□ -0.36
RNF40-206ENST00000564260 IGLL1P15814 213 aa12.79□□□□□ -0.36
RNF40-206ENST00000564260 GPR183P32249 361 aa12.79□□□□□ -0.36
RNF40-206ENST00000564260 ELLP55199 621 aaPredicted RBP12.79□□□□□ -0.36
RNF40-206ENST00000564260 TAS2R30P59541 319 aa12.79□□□□□ -0.36
RNF40-206ENST00000564260 RAB11AP62491 216 aa12.79□□□□□ -0.36
RNF40-206ENST00000564260 EGFEM1PQ0D2K5 195 aa12.79□□□□□ -0.36
RNF40-206ENST00000564260 ZBTB8BQ8NAP8 495 aaPredicted RBP12.79□□□□□ -0.36
RNF40-206ENST00000564260 OR4X1Q8NH49 305 aa12.79□□□□□ -0.36
RNF40-206ENST00000564260 CACNG8Q8WXS5 425 aa12.79□□□□□ -0.36
RNF40-206ENST00000564260 RAB40CQ96S21 281 aa12.79□□□□□ -0.36
RNF40-206ENST00000564260 TRAV30A0A087WSZ9 112 aa12.78□□□□□ -0.36
RNF40-206ENST00000564260 A8MWP6 167 aa12.78□□□□□ -0.36
RNF40-206ENST00000564260 SCAF4O95104 1147 aaKnown RBP12.78□□□□□ -0.36
RNF40-206ENST00000564260 GPX4P36969 197 aaPredicted RBP12.78□□□□□ -0.36
RNF40-206ENST00000564260 OPRK1P41145 380 aa12.78□□□□□ -0.36
RNF40-206ENST00000564260 OR4C12Q96R67 309 aa12.78□□□□□ -0.36
RNF40-206ENST00000564260 ZNF436Q9C0F3 470 aaPredicted RBP12.78□□□□□ -0.36
RNF40-206ENST00000564260 F8W735 103 aaPredicted RBP12.77□□□□□ -0.37
RNF40-206ENST00000564260 NDUFA4O00483 81 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms