RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 OR1P1Q8NH06 330 aa13.29□□□□□ -0.28
CMTM3-208ENST00000564247 HYLS1Q96M11 299 aa13.29□□□□□ -0.28
CMTM3-208ENST00000564247 P2RX4Q99571 388 aa13.29□□□□□ -0.28
CMTM3-208ENST00000564247 ZNF355PQ9NSJ1 428 aa13.29□□□□□ -0.28
CMTM3-208ENST00000564247 F11RQ9Y624 299 aaKnown RBP13.29□□□□□ -0.28
CMTM3-208ENST00000564247 HMSDA8MTL9 139 aa13.28□□□□□ -0.28
CMTM3-208ENST00000564247 G3V3Q6 166 aa13.28□□□□□ -0.28
CMTM3-208ENST00000564247 HIST1H1BP16401 226 aaKnown RBP13.28□□□□□ -0.28
CMTM3-208ENST00000564247 RPL12P30050 165 aaKnown RBP13.28□□□□□ -0.28
CMTM3-208ENST00000564247 PROK1P58294 105 aa13.28□□□□□ -0.28
CMTM3-208ENST00000564247 BSXQ3C1V8 233 aa13.28□□□□□ -0.28
CMTM3-208ENST00000564247 PRR31Q5SQ13 230 aa13.28□□□□□ -0.28
CMTM3-208ENST00000564247 ETV3LQ6ZN32 361 aa13.28□□□□□ -0.28
CMTM3-208ENST00000564247 OR4C12Q96R67 309 aa13.28□□□□□ -0.28
CMTM3-208ENST00000564247 THYN1Q9P016 225 aa13.28□□□□□ -0.28
CMTM3-208ENST00000564247 MGAM2Q2M2H8 2515 aa13.27□□□□□ -0.29
CMTM3-208ENST00000564247 PSMB11A5LHX3 300 aa13.27□□□□□ -0.29
CMTM3-208ENST00000564247 CORTO00230 105 aa13.27□□□□□ -0.29
CMTM3-208ENST00000564247 METTL15P1P0C7V9 234 aa13.27□□□□□ -0.29
CMTM3-208ENST00000564247 TMEM95Q3KNT9 176 aa13.27□□□□□ -0.29
CMTM3-208ENST00000564247 TMEM14EPQ6UXP3 125 aa13.27□□□□□ -0.29
CMTM3-208ENST00000564247 ACOT7LQ6ZUV0 252 aa13.27□□□□□ -0.29
CMTM3-208ENST00000564247 TMEM252Q8N6L7 170 aa13.27□□□□□ -0.29
CMTM3-208ENST00000564247 RNASEH2CQ8TDP1 164 aaKnown RBP13.27□□□□□ -0.29
CMTM3-208ENST00000564247 CITED1Q99966 193 aa13.27□□□□□ -0.29
CMTM3-208ENST00000564247 TNFSF18Q9UNG2 199 aa13.27□□□□□ -0.29
CMTM3-208ENST00000564247 C15orf62A8K5M9 175 aa13.26□□□□□ -0.29
CMTM3-208ENST00000564247 H3BUA1 57 aa13.26□□□□□ -0.29
CMTM3-208ENST00000564247 ARPC5O15511 151 aa13.26□□□□□ -0.29
CMTM3-208ENST00000564247 PPIFP30405 207 aaKnown RBP13.26□□□□□ -0.29
CMTM3-208ENST00000564247 SULT1A1P50225 295 aa13.26□□□□□ -0.29
CMTM3-208ENST00000564247 HBG1P69891 147 aa13.26□□□□□ -0.29
CMTM3-208ENST00000564247 HBG2P69892 147 aa13.26□□□□□ -0.29
CMTM3-208ENST00000564247 BAXQ07812 192 aa13.26□□□□□ -0.29
CMTM3-208ENST00000564247 C19orf54Q5BKX5 351 aa13.26□□□□□ -0.29
CMTM3-208ENST00000564247 OR11H4Q8NGC9 324 aa13.26□□□□□ -0.29
CMTM3-208ENST00000564247 OR10P1Q8NGE3 313 aa13.26□□□□□ -0.29
CMTM3-208ENST00000564247 PPP1R14BQ96C90 147 aa13.26□□□□□ -0.29
CMTM3-208ENST00000564247 MISP3Q96FF7 219 aa13.26□□□□□ -0.29
CMTM3-208ENST00000564247 MFFQ9GZY8 342 aa13.26□□□□□ -0.29
CMTM3-208ENST00000564247 SERTAD4Q9NUC0 356 aa13.26□□□□□ -0.29
CMTM3-208ENST00000564247 IGSF23A1L1A6 192 aa13.25□□□□□ -0.29
CMTM3-208ENST00000564247 CST7O76096 145 aa13.25□□□□□ -0.29
CMTM3-208ENST00000564247 KRTAP10-3P60369 221 aa13.25□□□□□ -0.29
CMTM3-208ENST00000564247 EWSR1Q01844 656 aaKnown RBP eCLIP13.25□□□□□ -0.29
CMTM3-208ENST00000564247 OR8G2PQ6IF36 304 aa13.25□□□□□ -0.29
CMTM3-208ENST00000564247 AQP10Q96PS8 301 aa13.25□□□□□ -0.29
CMTM3-208ENST00000564247 RPS10-NUDT3A0A1W2PQS6 291 aa13.24□□□□□ -0.29
CMTM3-208ENST00000564247 BRI3O95415 125 aa13.24□□□□□ -0.29
CMTM3-208ENST00000564247 IGHG4P01861 327 aa13.24□□□□□ -0.29
CMTM3-208ENST00000564247 PRH1P02810 166 aa13.24□□□□□ -0.29
CMTM3-208ENST00000564247 HNRNPCP07910 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
CMTM3-208ENST00000564247 PF4V1P10720 104 aa13.24□□□□□ -0.29
CMTM3-208ENST00000564247 S100A11P31949 105 aa13.24□□□□□ -0.29
CMTM3-208ENST00000564247 AP2S1P53680 142 aaPredicted RBP13.24□□□□□ -0.29
CMTM3-208ENST00000564247 NHLH2Q02577 135 aa13.24□□□□□ -0.29
CMTM3-208ENST00000564247 OR2F1Q13607 317 aa13.24□□□□□ -0.29
CMTM3-208ENST00000564247 EXOSC2Q13868 293 aaKnown RBP13.24□□□□□ -0.29
CMTM3-208ENST00000564247 PVRIGQ6DKI7 326 aa13.24□□□□□ -0.29
CMTM3-208ENST00000564247 ETFRF1Q6IPR1 90 aa13.24□□□□□ -0.29
CMTM3-208ENST00000564247 TEX38Q6PEX7 206 aa13.24□□□□□ -0.29
CMTM3-208ENST00000564247 C19orf35Q6ZS72 473 aa13.24□□□□□ -0.29
CMTM3-208ENST00000564247 ZNF329Q86UD4 541 aa13.24□□□□□ -0.29
CMTM3-208ENST00000564247 COMMD1Q8N668 190 aa13.24□□□□□ -0.29
CMTM3-208ENST00000564247 OR1S2Q8NGQ3 325 aa13.24□□□□□ -0.29
CMTM3-208ENST00000564247 TMEM170AQ8WVE7 144 aa13.24□□□□□ -0.29
CMTM3-208ENST00000564247 PINX1Q96BK5 328 aaKnown RBP13.24□□□□□ -0.29
CMTM3-208ENST00000564247 MS4A10Q96PG2 267 aa13.24□□□□□ -0.29
CMTM3-208ENST00000564247 SLA2Q9H6Q3 261 aa13.24□□□□□ -0.29
CMTM3-208ENST00000564247 IGLV11-55A0A075B6I3 123 aa13.23□□□□□ -0.29
CMTM3-208ENST00000564247 A0A0D9SG52 128 aa13.23□□□□□ -0.29
CMTM3-208ENST00000564247 OR2J3O76001 311 aa13.23□□□□□ -0.29
CMTM3-208ENST00000564247 IGLV1-40P01703 118 aa13.23□□□□□ -0.29
CMTM3-208ENST00000564247 TRGV3P03979 118 aa13.23□□□□□ -0.29
CMTM3-208ENST00000564247 ELANEP08246 267 aa13.23□□□□□ -0.29
CMTM3-208ENST00000564247 GPX4P36969 197 aaPredicted RBP13.23□□□□□ -0.29
CMTM3-208ENST00000564247 OPRK1P41145 380 aa13.23□□□□□ -0.29
CMTM3-208ENST00000564247 EIF2B2P49770 351 aaKnown RBP13.23□□□□□ -0.29
CMTM3-208ENST00000564247 MFAP2P55001 183 aa13.23□□□□□ -0.29
CMTM3-208ENST00000564247 CFHR3Q02985 330 aa13.23□□□□□ -0.29
CMTM3-208ENST00000564247 ATP6V1FQ16864 119 aa13.23□□□□□ -0.29
CMTM3-208ENST00000564247 TMEM217Q8N7C4 229 aa13.23□□□□□ -0.29
CMTM3-208ENST00000564247 NECAP1Q8NC96 275 aa13.23□□□□□ -0.29
CMTM3-208ENST00000564247 FANCD2OSQ96PS1 177 aa13.23□□□□□ -0.29
CMTM3-208ENST00000564247 FBXL7Q9UJT9 491 aa13.23□□□□□ -0.29
CMTM3-208ENST00000564247 HSPB11Q9Y547 144 aa13.23□□□□□ -0.29
CMTM3-208ENST00000564247 CMYA5Q8N3K9 4069 aa13.23□□□□□ -0.29
CMTM3-208ENST00000564247 SOX15O60248 233 aa13.22□□□□□ -0.29
CMTM3-208ENST00000564247 TPPP2P59282 170 aa13.22□□□□□ -0.29
CMTM3-208ENST00000564247 SLC38A11Q08AI6 406 aa13.22□□□□□ -0.29
CMTM3-208ENST00000564247 FOXE3Q13461 319 aa13.22□□□□□ -0.29
CMTM3-208ENST00000564247 KLK9Q2XQG4 91 aa13.22□□□□□ -0.29
CMTM3-208ENST00000564247 LILRB2Q8N423 598 aa13.22□□□□□ -0.29
CMTM3-208ENST00000564247 CACNG8Q8WXS5 425 aa13.22□□□□□ -0.29
CMTM3-208ENST00000564247 GGACTQ9BVM4 153 aa13.22□□□□□ -0.29
CMTM3-208ENST00000564247 KLK9Q9UKQ9 250 aa13.22□□□□□ -0.29
CMTM3-208ENST00000564247 VWFP04275 2813 aa13.22□□□□□ -0.29
CMTM3-208ENST00000564247 TRBV9A0A0B4J1U6 114 aa13.21□□□□□ -0.29
CMTM3-208ENST00000564247 FAM223BA6NKX1 122 aa13.21□□□□□ -0.29
CMTM3-208ENST00000564247 PMS2P5A8MQ11 134 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms