RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 PEMTQ9UBM1 199 aa11.16□□□□□ -0.62
RPUSD1-204ENST00000563560 DYNC2H1Q8NCM8 4307 aaKnown RBP11.15□□□□□ -0.62
RPUSD1-204ENST00000563560 TEX13DA0A0J9YY54 714 aaPredicted RBP11.15□□□□□ -0.62
RPUSD1-204ENST00000563560 FRMD6-AS1P0C7T7 363 aa11.15□□□□□ -0.62
RPUSD1-204ENST00000563560 NHLRC4P0CG21 123 aaPredicted RBP11.15□□□□□ -0.62
RPUSD1-204ENST00000563560 CBLN1P23435 193 aa11.15□□□□□ -0.62
RPUSD1-204ENST00000563560 TMEM187Q14656 261 aa11.15□□□□□ -0.62
RPUSD1-204ENST00000563560 SLC25A24Q6NUK1 477 aa11.15□□□□□ -0.62
RPUSD1-204ENST00000563560 MZT2BQ6NZ67 158 aa11.15□□□□□ -0.62
RPUSD1-204ENST00000563560 SBSPONQ8IVN8 264 aa11.15□□□□□ -0.62
RPUSD1-204ENST00000563560 THYN1Q9P016 225 aa11.15□□□□□ -0.62
RPUSD1-204ENST00000563560 IGHV3-21A0A0B4J1V1 117 aa11.14□□□□□ -0.63
RPUSD1-204ENST00000563560 CENPXA8MT69 81 aa11.14□□□□□ -0.63
RPUSD1-204ENST00000563560 CTSGP08311 255 aa11.14□□□□□ -0.63
RPUSD1-204ENST00000563560 IGHV4-30-4P0DP06 118 aa11.14□□□□□ -0.63
RPUSD1-204ENST00000563560 TM4SF20Q53R12 229 aa11.14□□□□□ -0.63
RPUSD1-204ENST00000563560 LINC00322Q6ZN03 302 aaPredicted RBP11.14□□□□□ -0.63
RPUSD1-204ENST00000563560 CENPSQ8N2Z9 138 aa11.14□□□□□ -0.63
RPUSD1-204ENST00000563560 OR1L6Q8NGR2 347 aa11.14□□□□□ -0.63
RPUSD1-204ENST00000563560 TMEM190Q8WZ59 177 aa11.14□□□□□ -0.63
RPUSD1-204ENST00000563560 RBPMSQ93062 196 aaKnown RBP11.14□□□□□ -0.63
RPUSD1-204ENST00000563560 C21orf62Q9NYP8 219 aa11.14□□□□□ -0.63
RPUSD1-204ENST00000563560 MLXQ9UH92 298 aa11.14□□□□□ -0.63
RPUSD1-204ENST00000563560 TBC1D24Q9ULP9 559 aa11.14□□□□□ -0.63
RPUSD1-204ENST00000563560 C14orf166Q9Y224 244 aaKnown RBP11.14□□□□□ -0.63
RPUSD1-204ENST00000563560 OR2T8A6NH00 312 aa11.13□□□□□ -0.63
RPUSD1-204ENST00000563560 RNASE2P10153 161 aaKnown RBP11.13□□□□□ -0.63
RPUSD1-204ENST00000563560 SPINK9Q5DT21 86 aa11.13□□□□□ -0.63
RPUSD1-204ENST00000563560 ZNF57Q68EA5 555 aaPredicted RBP11.13□□□□□ -0.63
RPUSD1-204ENST00000563560 LCN12Q6JVE5 192 aa11.13□□□□□ -0.63
RPUSD1-204ENST00000563560 Q6ZNX1 250 aa11.13□□□□□ -0.63
RPUSD1-204ENST00000563560 FAM219AQ8IW50 185 aa11.13□□□□□ -0.63
RPUSD1-204ENST00000563560 TOMM5Q8N4H5 51 aa11.13□□□□□ -0.63
RPUSD1-204ENST00000563560 BSCL2Q96G97 398 aaPredicted RBP11.13□□□□□ -0.63
RPUSD1-204ENST00000563560 ASCL2Q99929 193 aa11.13□□□□□ -0.63
RPUSD1-204ENST00000563560 TECRQ9NZ01 308 aaKnown RBP11.13□□□□□ -0.63
RPUSD1-204ENST00000563560 AKR1C2P52895 323 aa11.12□□□□□ -0.63
RPUSD1-204ENST00000563560 ELLP55199 621 aaPredicted RBP11.12□□□□□ -0.63
RPUSD1-204ENST00000563560 DHODHQ02127 395 aa11.12□□□□□ -0.63
RPUSD1-204ENST00000563560 SPSB3Q6PJ21 355 aa11.12□□□□□ -0.63
RPUSD1-204ENST00000563560 OR52E5Q8NH55 327 aa11.12□□□□□ -0.63
RPUSD1-204ENST00000563560 TMEM170AQ8WVE7 144 aa11.12□□□□□ -0.63
RPUSD1-204ENST00000563560 IL22RA2Q969J5 263 aa11.12□□□□□ -0.63
RPUSD1-204ENST00000563560 GPR146Q96CH1 333 aa11.12□□□□□ -0.63
RPUSD1-204ENST00000563560 TM2D3Q9BRN9 247 aa11.12□□□□□ -0.63
RPUSD1-204ENST00000563560 PLEKHA3Q9HB20 300 aa11.12□□□□□ -0.63
RPUSD1-204ENST00000563560 PRR13Q9NZ81 148 aa11.12□□□□□ -0.63
RPUSD1-204ENST00000563560 SCP2D1Q9UJQ7 156 aa11.12□□□□□ -0.63
RPUSD1-204ENST00000563560 IGHV3-35A0A0C4DH35 117 aa11.11□□□□□ -0.63
RPUSD1-204ENST00000563560 NAP1L6A6NFF2 107 aa11.11□□□□□ -0.63
RPUSD1-204ENST00000563560 LYRM1O43325 122 aa11.11□□□□□ -0.63
RPUSD1-204ENST00000563560 MT-CO2P00403 227 aa11.11□□□□□ -0.63
RPUSD1-204ENST00000563560 FAUP35544 74 aaKnown RBP11.11□□□□□ -0.63
RPUSD1-204ENST00000563560 FAM106AQ4KMX7 169 aa11.11□□□□□ -0.63
RPUSD1-204ENST00000563560 NMSQ5H8A3 153 aa11.11□□□□□ -0.63
RPUSD1-204ENST00000563560 PLET1Q6UQ28 207 aa11.11□□□□□ -0.63
RPUSD1-204ENST00000563560 TMEM61Q8N0U2 210 aa11.11□□□□□ -0.63
RPUSD1-204ENST00000563560 UXS1Q8NBZ7 420 aa11.11□□□□□ -0.63
RPUSD1-204ENST00000563560 ENKURQ8TC29 256 aa11.11□□□□□ -0.63
RPUSD1-204ENST00000563560 FNDC4Q9H6D8 234 aaPredicted RBP11.11□□□□□ -0.63
RPUSD1-204ENST00000563560 MRPL36Q9P0J6 103 aaKnown RBP11.11□□□□□ -0.63
RPUSD1-204ENST00000563560 SACSQ9NZJ4 4579 aa11.11□□□□□ -0.63
RPUSD1-204ENST00000563560 LYSTQ99698 3801 aa11.1□□□□□ -0.63
RPUSD1-204ENST00000563560 NDUFA4O00483 81 aa11.1□□□□□ -0.63
RPUSD1-204ENST00000563560 CYB5BO43169 146 aa11.1□□□□□ -0.63
RPUSD1-204ENST00000563560 ATG12O94817 140 aa11.1□□□□□ -0.63
RPUSD1-204ENST00000563560 CD7P09564 240 aa11.1□□□□□ -0.63
RPUSD1-204ENST00000563560 TMEM268Q5VZI3 342 aa11.1□□□□□ -0.63
RPUSD1-204ENST00000563560 SLC35G3Q8N808 338 aa11.1□□□□□ -0.63
RPUSD1-204ENST00000563560 WDR89Q96FK6 387 aaPredicted RBP11.1□□□□□ -0.63
RPUSD1-204ENST00000563560 OR10C1Q96KK4 312 aa11.1□□□□□ -0.63
RPUSD1-204ENST00000563560 TXN2Q99757 166 aa11.1□□□□□ -0.63
RPUSD1-204ENST00000563560 U3KQK5 164 aa11.1□□□□□ -0.63
RPUSD1-204ENST00000563560 PLA2G10O15496 165 aa11.09□□□□□ -0.63
RPUSD1-204ENST00000563560 IGHV3-48P01763 117 aa11.09□□□□□ -0.63
RPUSD1-204ENST00000563560 BTCP35070 178 aa11.09□□□□□ -0.63
RPUSD1-204ENST00000563560 SPCS3P61009 180 aa11.09□□□□□ -0.63
RPUSD1-204ENST00000563560 ERHP84090 104 aaKnown RBP11.09□□□□□ -0.63
RPUSD1-204ENST00000563560 MARC2Q969Z3 335 aa11.09□□□□□ -0.63
RPUSD1-204ENST00000563560 RRNAD1Q96FB5 475 aaKnown RBP11.09□□□□□ -0.63
RPUSD1-204ENST00000563560 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.09□□□□□ -0.63
RPUSD1-204ENST00000563560 MCUBQ9NWR8 336 aa11.09□□□□□ -0.63
RPUSD1-204ENST00000563560 MRPL27Q9P0M9 148 aaKnown RBP11.09□□□□□ -0.63
RPUSD1-204ENST00000563560 CACNG5Q9UF02 275 aa11.09□□□□□ -0.63
RPUSD1-204ENST00000563560 SELENOKQ9Y6D0 94 aa11.09□□□□□ -0.63
RPUSD1-204ENST00000563560 FAM240BA0A1B0GVZ2 78 aa11.08□□□□□ -0.64
RPUSD1-204ENST00000563560 ZNF320A2RRD8 509 aa11.08□□□□□ -0.64
RPUSD1-204ENST00000563560 K7EMT4 169 aa11.08□□□□□ -0.64
RPUSD1-204ENST00000563560 PITX3O75364 302 aa11.08□□□□□ -0.64
RPUSD1-204ENST00000563560 MLANAQ16655 118 aa11.08□□□□□ -0.64
RPUSD1-204ENST00000563560 BTNL8Q6UX41 500 aa11.08□□□□□ -0.64
RPUSD1-204ENST00000563560 NRARPQ7Z6K4 114 aa11.08□□□□□ -0.64
RPUSD1-204ENST00000563560 SGPP2Q8IWX5 399 aa11.08□□□□□ -0.64
RPUSD1-204ENST00000563560 LRTM2Q8N967 370 aa11.08□□□□□ -0.64
RPUSD1-204ENST00000563560 DUSP18Q8NEJ0 188 aa11.08□□□□□ -0.64
RPUSD1-204ENST00000563560 MISP3Q96FF7 219 aa11.08□□□□□ -0.64
RPUSD1-204ENST00000563560 SCGB3A2Q96PL1 93 aa11.08□□□□□ -0.64
RPUSD1-204ENST00000563560 WFDC10AQ9H1F0 79 aa11.08□□□□□ -0.64
RPUSD1-204ENST00000563560 UFC1Q9Y3C8 167 aa11.08□□□□□ -0.64
RPUSD1-204ENST00000563560 A0A0B4J2A0 478 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms