RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 TMEM14EPQ6UXP3 125 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 VKORC1L1Q8N0U8 176 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 SAP30O75446 220 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 MOSP00540 346 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 RUNX3Q13761 415 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 C3AR1Q16581 482 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 PRSS8Q16651 343 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 C1orf43Q9BWL3 253 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 A0A1W2PPI3 338 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 LGALS1P09382 135 aaKnown RBP5.27□□□□□ -1.57
CLK3-212ENST00000563418 C2orf82Q6UX34 121 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 C1orf122Q6ZSJ8 110 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 ZNF721Q8TF20 911 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 FAM110AQ9BQ89 295 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 TMUB1Q9BVT8 246 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 BEX4Q9NWD9 120 aaPredicted RBP5.27□□□□□ -1.57
CLK3-212ENST00000563418 DOCK3Q8IZD9 2030 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 SBF1O95248 1867 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 FABP5P3A8MUU1 101 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 C2CD4DB7Z1M9 353 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 SRSF1Q07955 248 aaKnown RBP eCLIP5.27□□□□□ -1.57
CLK3-212ENST00000563418 FOXI2Q6ZQN5 318 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 TEN1Q86WV5 123 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 CEND1Q8N111 149 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 ABHD17AQ96GS6 310 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 LHFPL6Q9Y693 200 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 CELA2BP08218 269 aaPredicted RBP5.27□□□□□ -1.57
CLK3-212ENST00000563418 TNFRSF4P43489 277 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 UTF1Q5T230 341 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 OR11H6Q8NGC7 330 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 ZNF488Q96MN9 340 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 THAP10Q9P2Z0 257 aaPredicted RBP5.27□□□□□ -1.57
CLK3-212ENST00000563418 ALPK2Q86TB3 2170 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 TRBV20OR9-2A0A075B6H5 130 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 SMIM27A0A1W2PRY6 76 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 ZNF815PA8K554 130 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 PRDX2P32119 198 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 PTCRAQ6ISU1 281 aaPredicted RBP5.27□□□□□ -1.57
CLK3-212ENST00000563418 TMSB15BA0A087X1C1 80 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 A0A1W2PPV9 198 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 ZNF785A8K8V0 405 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 CT62P0C5K7 136 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 FCGR2BP31994 310 aaPredicted RBP5.26□□□□□ -1.57
CLK3-212ENST00000563418 Q6ZS49 121 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 FNDC1Q4ZHG4 1894 aaPredicted RBP5.26□□□□□ -1.57
CLK3-212ENST00000563418 FAM78AQ5JUQ0 283 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 FHL5Q5TD97 284 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 WDR83OSQ9Y284 106 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 SHISA9B4DS77 424 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 PRSS53Q2L4Q9 553 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 FAM231DQ6ZW35 169 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 SCGB3A1Q96QR1 104 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 SCRT2Q9NQ03 307 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 C18orf15Q96N68 181 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 SPATA25Q9BR10 227 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 C1RLQ9NZP8 487 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 CENPVL1A0A0U1RR11 272 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 GHRHP01286 108 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 VSIRQ9H7M9 311 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 TCF19Q9Y242 345 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 ADAMTSL1Q8N6G6 1762 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 PLAUP00749 431 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 PRSS2P07478 247 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 DLX6P56179 175 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 PDCD1Q15116 288 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 CRISPLD2Q9H0B8 497 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 F5H697 171 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 FAM106CPP0CH98 169 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 TMEM258P61165 79 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 FAM106AQ4KMX7 169 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 TMEM178AQ8NBL3 297 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 SLC25A39Q9BZJ4 359 aaPredicted RBP5.26□□□□□ -1.57
CLK3-212ENST00000563418 LCTP09848 1927 aa5.26□□□□□ -1.57
CLK3-212ENST00000563418 hCG_38984A0A1B0GV85 526 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 RNPS1Q15287 305 aaKnown RBP5.25□□□□□ -1.57
CLK3-212ENST00000563418 EFNB3Q15768 340 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 IGKV1D-42A0A075B6H8 117 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 SLC25A47Q6Q0C1 308 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 HIGD1BQ9P298 99 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 IGHV4-34P06331 123 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 IGHV4-39P01824 125 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 PAX1P15863 534 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 COLCA1Q6ZS62 124 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 AMN1Q8IY45 258 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 QRFPP83859 136 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 IL15RAQ13261 267 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 LINC01545Q5VT33 79 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 DEFB108AA8MXU0 73 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 FOXI1Q12951 378 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 MBNL2Q5VZF2 373 aaKnown RBP5.25□□□□□ -1.57
CLK3-212ENST00000563418 YRDCQ86U90 279 aaKnown RBP5.25□□□□□ -1.57
CLK3-212ENST00000563418 LTBP3Q9NS15 1303 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 LILRA5A6NI73 299 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 NDUFV3P56181 108 aaKnown RBP5.25□□□□□ -1.57
CLK3-212ENST00000563418 LAGE3Q14657 143 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 PRDM14Q9GZV8 571 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 CXXC4Q9H2H0 198 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 OTORQ9NRC9 128 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 JPT1Q9UK76 154 aa5.25□□□□□ -1.57
CLK3-212ENST00000563418 NRXN2Q9P2S2 1712 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms