RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 RAB3DO95716 219 aa11.69□□□□□ -0.54
SF3B3-203ENST00000562874 TFPI2P48307 235 aa11.69□□□□□ -0.54
SF3B3-203ENST00000562874 ALDH3B2P48448 385 aa11.69□□□□□ -0.54
SF3B3-203ENST00000562874 MFAP4P55083 255 aa11.69□□□□□ -0.54
SF3B3-203ENST00000562874 TAS2R19P59542 299 aa11.69□□□□□ -0.54
SF3B3-203ENST00000562874 ZNF124Q15973 351 aa11.69□□□□□ -0.54
SF3B3-203ENST00000562874 DEFB135Q30KP9 77 aa11.69□□□□□ -0.54
SF3B3-203ENST00000562874 TMEM229BQ8NBD8 167 aa11.69□□□□□ -0.54
SF3B3-203ENST00000562874 RNASE11Q8TAA1 199 aaKnown RBP11.69□□□□□ -0.54
SF3B3-203ENST00000562874 ATP6V0BQ99437 205 aa11.69□□□□□ -0.54
SF3B3-203ENST00000562874 RNF2Q99496 336 aa11.69□□□□□ -0.54
SF3B3-203ENST00000562874 OVOL2Q9BRP0 275 aa11.69□□□□□ -0.54
SF3B3-203ENST00000562874 COPZ2Q9P299 210 aa11.69□□□□□ -0.54
SF3B3-203ENST00000562874 ALMS1Q8TCU4 4167 aa11.69□□□□□ -0.54
SF3B3-203ENST00000562874 DNAH1Q9P2D7 4330 aa11.69□□□□□ -0.54
SF3B3-203ENST00000562874 IGHV7-4-1A0A0J9YVY3 117 aa11.68□□□□□ -0.54
SF3B3-203ENST00000562874 C15orf62A8K5M9 175 aa11.68□□□□□ -0.54
SF3B3-203ENST00000562874 CTDSP2O14595 271 aa11.68□□□□□ -0.54
SF3B3-203ENST00000562874 IFNA17P01571 189 aa11.68□□□□□ -0.54
SF3B3-203ENST00000562874 CD74P04233 296 aa11.68□□□□□ -0.54
SF3B3-203ENST00000562874 P0C879 139 aa11.68□□□□□ -0.54
SF3B3-203ENST00000562874 RPL35AP18077 110 aaKnown RBP11.68□□□□□ -0.54
SF3B3-203ENST00000562874 HOXA1P49639 335 aaPredicted RBP11.68□□□□□ -0.54
SF3B3-203ENST00000562874 ERHP84090 104 aaKnown RBP11.68□□□□□ -0.54
SF3B3-203ENST00000562874 RELQ04864 619 aaPredicted RBP11.68□□□□□ -0.54
SF3B3-203ENST00000562874 LAMTOR1Q6IAA8 161 aa11.68□□□□□ -0.54
SF3B3-203ENST00000562874 STEAP1BQ6NZ63 245 aa11.68□□□□□ -0.54
SF3B3-203ENST00000562874 CLVS1Q8IUQ0 354 aaPredicted RBP11.68□□□□□ -0.54
SF3B3-203ENST00000562874 CCDC71LQ8N9Z2 235 aa11.68□□□□□ -0.54
SF3B3-203ENST00000562874 RHPN1-AS1Q9BWJ2 59 aa11.68□□□□□ -0.54
SF3B3-203ENST00000562874 A0A0B4J293 547 aa11.67□□□□□ -0.54
SF3B3-203ENST00000562874 OR4C46A6NHA9 309 aa11.67□□□□□ -0.54
SF3B3-203ENST00000562874 GABARAPH6UMI1 98 aa11.67□□□□□ -0.54
SF3B3-203ENST00000562874 K7EMT4 169 aa11.67□□□□□ -0.54
SF3B3-203ENST00000562874 CHEK1O14757 476 aa11.67□□□□□ -0.54
SF3B3-203ENST00000562874 TBPP20226 339 aa11.67□□□□□ -0.54
SF3B3-203ENST00000562874 APRG1Q8IVJ8 170 aa11.67□□□□□ -0.54
SF3B3-203ENST00000562874 TMEM116Q8NCL8 245 aa11.67□□□□□ -0.54
SF3B3-203ENST00000562874 PDCD10Q9BUL8 212 aa11.67□□□□□ -0.54
SF3B3-203ENST00000562874 NXF2Q9GZY0 626 aaKnown RBP11.67□□□□□ -0.54
SF3B3-203ENST00000562874 SMPXQ9UHP9 88 aa11.67□□□□□ -0.54
SF3B3-203ENST00000562874 IGHV3-66A0A0C4DH42 116 aa11.66□□□□□ -0.54
SF3B3-203ENST00000562874 OR5AC1P0C628 307 aa11.66□□□□□ -0.54
SF3B3-203ENST00000562874 RNASE2P10153 161 aaKnown RBP11.66□□□□□ -0.54
SF3B3-203ENST00000562874 UCP1P25874 307 aa11.66□□□□□ -0.54
SF3B3-203ENST00000562874 FCGR2BP31994 310 aaPredicted RBP11.66□□□□□ -0.54
SF3B3-203ENST00000562874 ETV6P41212 452 aa11.66□□□□□ -0.54
SF3B3-203ENST00000562874 EWSR1Q01844 656 aaKnown RBP eCLIP11.66□□□□□ -0.54
SF3B3-203ENST00000562874 PMS2P11Q13670 270 aa11.66□□□□□ -0.54
SF3B3-203ENST00000562874 IL18Q14116 193 aa11.66□□□□□ -0.54
SF3B3-203ENST00000562874 GBGT1Q8N5D6 347 aa11.66□□□□□ -0.54
SF3B3-203ENST00000562874 OR4C16Q8NGL9 310 aa11.66□□□□□ -0.54
SF3B3-203ENST00000562874 TERB2Q8NHR7 220 aa11.66□□□□□ -0.54
SF3B3-203ENST00000562874 LHFPL5Q8TAF8 219 aa11.66□□□□□ -0.54
SF3B3-203ENST00000562874 MRPL36Q9P0J6 103 aaKnown RBP11.66□□□□□ -0.54
SF3B3-203ENST00000562874 PLECQ15149 4684 aaKnown RBP11.65□□□□□ -0.54
SF3B3-203ENST00000562874 A0A0J9YWU9 116 aa11.65□□□□□ -0.54
SF3B3-203ENST00000562874 SNCAP37840 140 aa11.65□□□□□ -0.54
SF3B3-203ENST00000562874 APOC4P55056 127 aa11.65□□□□□ -0.54
SF3B3-203ENST00000562874 ZFAND1Q8TCF1 268 aa11.65□□□□□ -0.54
SF3B3-203ENST00000562874 SMIM4Q8WVI0 70 aa11.65□□□□□ -0.54
SF3B3-203ENST00000562874 ST8SIA2Q92186 375 aa11.65□□□□□ -0.54
SF3B3-203ENST00000562874 OR10C1Q96KK4 312 aa11.65□□□□□ -0.54
SF3B3-203ENST00000562874 TXN2Q99757 166 aa11.65□□□□□ -0.54
SF3B3-203ENST00000562874 C14orf166Q9Y224 244 aaKnown RBP11.65□□□□□ -0.54
SF3B3-203ENST00000562874 NXPH3O95157 252 aa11.64□□□□□ -0.55
SF3B3-203ENST00000562874 APOHP02749 345 aaPredicted RBP11.64□□□□□ -0.55
SF3B3-203ENST00000562874 TOMM20LQ6UXN7 152 aa11.64□□□□□ -0.55
SF3B3-203ENST00000562874 Q6ZRM9 215 aa11.64□□□□□ -0.55
SF3B3-203ENST00000562874 IL17DQ8TAD2 202 aa11.64□□□□□ -0.55
SF3B3-203ENST00000562874 C15orf40Q8WUR7 153 aa11.64□□□□□ -0.55
SF3B3-203ENST00000562874 RRNAD1Q96FB5 475 aaKnown RBP11.64□□□□□ -0.55
SF3B3-203ENST00000562874 DIRAS2Q96HU8 199 aa11.64□□□□□ -0.55
SF3B3-203ENST00000562874 FNDC4Q9H6D8 234 aaPredicted RBP11.64□□□□□ -0.55
SF3B3-203ENST00000562874 NAA60Q9H7X0 242 aa11.64□□□□□ -0.55
SF3B3-203ENST00000562874 ZFAND3Q9H8U3 227 aa11.64□□□□□ -0.55
SF3B3-203ENST00000562874 MAP6D1Q9H9H5 199 aa11.64□□□□□ -0.55
SF3B3-203ENST00000562874 PRR13Q9NZ81 148 aa11.64□□□□□ -0.55
SF3B3-203ENST00000562874 PUS1Q9Y606 427 aaKnown RBP eCLIP11.64□□□□□ -0.55
SF3B3-203ENST00000562874 TRAV14DV4A0A0A6YYC5 116 aa11.63□□□□□ -0.55
SF3B3-203ENST00000562874 A0A1B0GU03 582 aa11.63□□□□□ -0.55
SF3B3-203ENST00000562874 SPRY2O43597 315 aa11.63□□□□□ -0.55
SF3B3-203ENST00000562874 JTBO76095 146 aa11.63□□□□□ -0.55
SF3B3-203ENST00000562874 ATG12O94817 140 aa11.63□□□□□ -0.55
SF3B3-203ENST00000562874 OPRK1P41145 380 aa11.63□□□□□ -0.55
SF3B3-203ENST00000562874 MEF2DQ14814 521 aa11.63□□□□□ -0.55
SF3B3-203ENST00000562874 TCF24Q7RTU0 167 aa11.63□□□□□ -0.55
SF3B3-203ENST00000562874 LYG2Q86SG7 212 aa11.63□□□□□ -0.55
SF3B3-203ENST00000562874 WFDC3Q8IUB2 231 aa11.63□□□□□ -0.55
SF3B3-203ENST00000562874 DUSP18Q8NEJ0 188 aa11.63□□□□□ -0.55
SF3B3-203ENST00000562874 DYNC2LI1Q8TCX1 351 aa11.63□□□□□ -0.55
SF3B3-203ENST00000562874 GINS3Q9BRX5 216 aa11.63□□□□□ -0.55
SF3B3-203ENST00000562874 RTBDNQ9BSG5 229 aaPredicted RBP11.63□□□□□ -0.55
SF3B3-203ENST00000562874 C6orf62Q9GZU0 229 aaPredicted RBP11.63□□□□□ -0.55
SF3B3-203ENST00000562874 ENY2Q9NPA8 101 aa11.63□□□□□ -0.55
SF3B3-203ENST00000562874 CCDC59Q9P031 241 aaKnown RBP11.63□□□□□ -0.55
SF3B3-203ENST00000562874 TEX13DA0A0J9YY54 714 aaPredicted RBP11.62□□□□□ -0.55
SF3B3-203ENST00000562874 DISC1C4P0D8 188 aa11.62□□□□□ -0.55
SF3B3-203ENST00000562874 AKAIN1P0CW23 69 aa11.62□□□□□ -0.55
SF3B3-203ENST00000562874 NPBWR1P48145 328 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms