RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 OR1P1Q8NH06 330 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 ZNF502Q8TBZ5 544 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 SCARB1Q8WTV0 552 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 USMG5Q96IX5 58 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 OR4F4Q96R69 305 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 PDCD10Q9BUL8 212 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 FNDC4Q9H6D8 234 aaPredicted RBP7.52□□□□□ -1.21
CLK3-208ENST00000562626 ZC4H2Q9NQZ6 224 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 ALG5Q9Y673 324 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 MGAM2Q2M2H8 2515 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 MYCNOSP40205 109 aa7.51□□□□□ -1.21
CLK3-208ENST00000562626 PAX9P55771 341 aa7.51□□□□□ -1.21
CLK3-208ENST00000562626 POLR2GP62487 172 aaKnown RBP eCLIP7.51□□□□□ -1.21
CLK3-208ENST00000562626 ERHP84090 104 aaKnown RBP7.51□□□□□ -1.21
CLK3-208ENST00000562626 ID3Q02535 119 aa7.51□□□□□ -1.21
CLK3-208ENST00000562626 ZNF616Q08AN1 781 aa7.51□□□□□ -1.21
CLK3-208ENST00000562626 IL15RAQ13261 267 aa7.51□□□□□ -1.21
CLK3-208ENST00000562626 OXA1LQ15070 435 aa7.51□□□□□ -1.21
CLK3-208ENST00000562626 TATDN3Q17R31 274 aa7.51□□□□□ -1.21
CLK3-208ENST00000562626 IAH1Q2TAA2 248 aaPredicted RBP7.51□□□□□ -1.21
CLK3-208ENST00000562626 CLEC19AQ6UXS0 136 aa7.51□□□□□ -1.21
CLK3-208ENST00000562626 DTD1Q8TEA8 209 aa7.51□□□□□ -1.21
CLK3-208ENST00000562626 DLX4Q92988 240 aaPredicted RBP7.51□□□□□ -1.21
CLK3-208ENST00000562626 MISP3Q96FF7 219 aa7.51□□□□□ -1.21
CLK3-208ENST00000562626 OR4C12Q96R67 309 aa7.51□□□□□ -1.21
CLK3-208ENST00000562626 HEYLQ9NQ87 328 aaPredicted RBP7.51□□□□□ -1.21
CLK3-208ENST00000562626 RCL1Q9Y2P8 373 aaKnown RBP7.51□□□□□ -1.21
CLK3-208ENST00000562626 A0A0G2JLM5 398 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 C15orf62A8K5M9 175 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 SNRPGP15A8MWD9 76 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 FAM25EA8MYX2 175 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 H3BP45 60 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 WRBO00258 174 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 SYNGR2O43760 224 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 PRAF2O60831 178 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 CCNKO75909 580 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 DHFRP00374 187 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 MT-CO2P00403 227 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 MBPP02686 304 aaPredicted RBP7.5□□□□□ -1.21
CLK3-208ENST00000562626 PF4P02776 101 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 HSPB1P04792 205 aaKnown RBP7.5□□□□□ -1.21
CLK3-208ENST00000562626 HIST1H1BP16401 226 aaKnown RBP7.5□□□□□ -1.21
CLK3-208ENST00000562626 HOXD3P31249 432 aaPredicted RBP7.5□□□□□ -1.21
CLK3-208ENST00000562626 GPR183P32249 361 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 ADMP35318 185 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 SLC24A4Q8NFF2 622 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 DCUN1D4Q92564 292 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 PINX1Q96BK5 328 aaKnown RBP7.5□□□□□ -1.21
CLK3-208ENST00000562626 CHRDL1Q9BU40 450 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 C11orf1Q9H5F2 150 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 GSKIPQ9P0R6 139 aa7.5□□□□□ -1.21
CLK3-208ENST00000562626 PEF1Q9UBV8 284 aaKnown RBP7.5□□□□□ -1.21
CLK3-208ENST00000562626 IGHV3-35A0A0C4DH35 117 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 FAM90A26D6RGX4 464 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 LINC01619G3V211 115 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 GOSR2O14653 212 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 SSSCA1O60232 199 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 SCGB1D2O95969 90 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 IFNA21P01568 189 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 IGLL1P15814 213 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 NPY1RP25929 384 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 SNCAP37840 140 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 NKX2-1P43699 371 aaPredicted RBP7.49□□□□□ -1.21
CLK3-208ENST00000562626 H2BFSP57053 126 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 RGS21Q2M5E4 152 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 C2orf83Q53S99 150 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 OXLD1Q5BKU9 147 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 C1QL4Q86Z23 238 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 WFDC9Q8NEX5 89 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 VN1R17PQ8TDU5 208 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 EEF1AKMT3Q96AZ1 226 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 GPN1Q9HCN4 374 aaPredicted RBP7.49□□□□□ -1.21
CLK3-208ENST00000562626 ENY2Q9NPA8 101 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 SORL1Q92673 2214 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 NBEAL2Q6ZNJ1 2754 aa7.49□□□□□ -1.21
CLK3-208ENST00000562626 C5orf51A6NDU8 294 aa7.48□□□□□ -1.21
CLK3-208ENST00000562626 OR2T8A6NH00 312 aa7.48□□□□□ -1.21
CLK3-208ENST00000562626 PMS2P5A8MQ11 134 aa7.48□□□□□ -1.21
CLK3-208ENST00000562626 PRSS46E5RG02 174 aa7.48□□□□□ -1.21
CLK3-208ENST00000562626 G3V4G9 280 aa7.48□□□□□ -1.21
CLK3-208ENST00000562626 K7EPK0 472 aa7.48□□□□□ -1.21
CLK3-208ENST00000562626 OR2C1O95371 312 aa7.48□□□□□ -1.21
CLK3-208ENST00000562626 CLEC3BP05452 202 aa7.48□□□□□ -1.21
CLK3-208ENST00000562626 CXCL3P19876 107 aa7.48□□□□□ -1.21
CLK3-208ENST00000562626 ARL3P36405 182 aa7.48□□□□□ -1.21
CLK3-208ENST00000562626 HTR2BP41595 481 aa7.48□□□□□ -1.21
CLK3-208ENST00000562626 GSG1LQ6UXU4 331 aa7.48□□□□□ -1.21
CLK3-208ENST00000562626 IL34Q6ZMJ4 242 aa7.48□□□□□ -1.21
CLK3-208ENST00000562626 HAPLN4Q86UW8 402 aa7.48□□□□□ -1.21
CLK3-208ENST00000562626 DPF1Q92782 380 aa7.48□□□□□ -1.21
CLK3-208ENST00000562626 C2orf50Q96LR7 162 aa7.48□□□□□ -1.21
CLK3-208ENST00000562626 RANGRFQ9HD47 186 aaPredicted RBP7.48□□□□□ -1.21
CLK3-208ENST00000562626 C21orf62Q9NYP8 219 aa7.48□□□□□ -1.21
CLK3-208ENST00000562626 SELENOKQ9Y6D0 94 aa7.48□□□□□ -1.21
CLK3-208ENST00000562626 IGHV3OR16-8A0A075B7F1 116 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 TRBV7-1A0A0A6YYK4 115 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 PIGBOS1A0A0B4J2F0 54 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 H0YIZ8 118 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 IFNA10P01566 189 aa7.47□□□□□ -1.21
CLK3-208ENST00000562626 CTSGP08311 255 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms