RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 UQCRFS1P47985 274 aa11.58□□□□□ -0.56
GTF3C1-203ENST00000562609 JMJD8Q96S16 334 aa11.58□□□□□ -0.56
GTF3C1-203ENST00000562609 SCRT2Q9NQ03 307 aa11.58□□□□□ -0.56
GTF3C1-203ENST00000562609 CUL9Q8IWT3 2517 aa11.58□□□□□ -0.56
GTF3C1-203ENST00000562609 GCHFRP30047 84 aa11.58□□□□□ -0.56
GTF3C1-203ENST00000562609 PLP1P60201 277 aa11.58□□□□□ -0.56
GTF3C1-203ENST00000562609 FDCSPQ8NFU4 85 aa11.58□□□□□ -0.56
GTF3C1-203ENST00000562609 C11orf52Q96A22 123 aa11.58□□□□□ -0.56
GTF3C1-203ENST00000562609 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-203ENST00000562609 MTCH1Q9NZJ7 389 aa11.58□□□□□ -0.56
GTF3C1-203ENST00000562609 KMT2EQ8IZD2 1858 aa11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 HELTA6NFD8 242 aa11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 SCGB1A1P11684 91 aa11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 ZNF816Q0VGE8 651 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 MIC13Q5XKP0 118 aa11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 LINC00173Q6ZV60 143 aa11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 OR10W1Q8NGF6 305 aa11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 OR4A5Q8NH83 315 aa11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 OSTCQ9NRP0 149 aa11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 SYS1-DBNDD2H3BUS1 97 aa11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 H3BUT2 72 aa11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 CGAP01215 116 aa11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 APOA2P02652 100 aa11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 FOXE3Q13461 319 aa11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 PDLIM3Q53GG5 364 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 PIP4P1Q86T03 277 aa11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 SAP30LQ9HAJ7 183 aa11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 THYN1Q9P016 225 aa11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 SMG1Q96Q15 3661 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-203ENST00000562609 CEP295Q9C0D2 2601 aa11.56□□□□□ -0.56
GTF3C1-203ENST00000562609 K7EP34 96 aa11.56□□□□□ -0.56
GTF3C1-203ENST00000562609 SNAI2O43623 268 aa11.56□□□□□ -0.56
GTF3C1-203ENST00000562609 DRAM1Q8N682 238 aa11.56□□□□□ -0.56
GTF3C1-203ENST00000562609 SPSB4Q96A44 273 aa11.56□□□□□ -0.56
GTF3C1-203ENST00000562609 SIGMAR1Q99720 223 aa11.56□□□□□ -0.56
GTF3C1-203ENST00000562609 ZNF835Q9Y2P0 537 aa11.56□□□□□ -0.56
GTF3C1-203ENST00000562609 ANKRD11Q6UB99 2663 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-203ENST00000562609 SMIM27A0A1W2PRY6 76 aa11.56□□□□□ -0.56
GTF3C1-203ENST00000562609 HLA-DRB1P01911 266 aa11.56□□□□□ -0.56
GTF3C1-203ENST00000562609 KRTAP27-1Q3LI81 207 aa11.56□□□□□ -0.56
GTF3C1-203ENST00000562609 CFAP161Q6P656 301 aa11.56□□□□□ -0.56
GTF3C1-203ENST00000562609 MCRIP2Q9BUT9 160 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-203ENST00000562609 TRGV5A0A0B4J1U4 118 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 C9orf118A6NHY6 69 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 CDIPTO14735 213 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 CRXO43186 299 aaPredicted RBP11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 HTR1DP28221 377 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 RAB9AP51151 201 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 GPM6AP51674 278 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 TIGITQ495A1 244 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 IBA57Q5T440 356 aaKnown RBP11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 ASPHD1Q5U4P2 390 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 STPG3Q8N7X2 389 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 IZUMO1RA6ND01 250 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 FOXH1O75593 365 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 RPL24P83731 157 aaKnown RBP11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 PRR31Q5SQ13 230 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 SPATA46Q5T0L3 261 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 SPATA31B1PQ5VZV4 182 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 WDR82Q6UXN9 313 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 OR2K2Q8NGT1 345 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 C1QTNF5Q9BXJ0 243 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 NPFFR1Q9GZQ6 430 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 ZNF391Q9UJN7 358 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 IGHV3-64DA0A0J9YX35 117 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 C15orf62A8K5M9 175 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 CEACAM3P40198 252 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 OPRK1P41145 380 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 SEC11AP67812 179 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 KLF5Q13887 457 aaPredicted RBP11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 FAM120AOSQ5T036 256 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 GDF5OSQ5U4N7 250 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 SSBP4Q9BWG4 385 aaPredicted RBP11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 SSBP3Q9BWW4 388 aaPredicted RBP11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 TMEM191AQ9H0A3 160 aa11.55□□□□□ -0.56
GTF3C1-203ENST00000562609 ACACAQ13085 2346 aa11.54□□□□□ -0.56
GTF3C1-203ENST00000562609 TRAPPC2LH3BP13 241 aa11.54□□□□□ -0.56
GTF3C1-203ENST00000562609 ISLRO14498 428 aa11.54□□□□□ -0.56
GTF3C1-203ENST00000562609 MFAP2P55001 183 aa11.54□□□□□ -0.56
GTF3C1-203ENST00000562609 SSMEM1Q8WWF3 244 aa11.54□□□□□ -0.56
GTF3C1-203ENST00000562609 FGF23Q9GZV9 251 aaPredicted RBP11.54□□□□□ -0.56
GTF3C1-203ENST00000562609 INTS1Q8N201 2190 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-203ENST00000562609 TRAV26-1A0A087WT03 109 aa11.54□□□□□ -0.56
GTF3C1-203ENST00000562609 H0Y8G0 127 aa11.54□□□□□ -0.56
GTF3C1-203ENST00000562609 REG1BP48304 166 aa11.54□□□□□ -0.56
GTF3C1-203ENST00000562609 TMEM97Q5BJF2 176 aa11.54□□□□□ -0.56
GTF3C1-203ENST00000562609 FAM168AQ92567 244 aa11.54□□□□□ -0.56
GTF3C1-203ENST00000562609 URB1-AS1Q96HZ7 61 aa11.54□□□□□ -0.56
GTF3C1-203ENST00000562609 ZNF488Q96MN9 340 aa11.54□□□□□ -0.56
GTF3C1-203ENST00000562609 LINC00470Q9BZP3 86 aa11.54□□□□□ -0.56
GTF3C1-203ENST00000562609 JKAMPQ9P055 326 aa11.54□□□□□ -0.56
GTF3C1-203ENST00000562609 ICE1Q9Y2F5 2266 aa11.53□□□□□ -0.56
GTF3C1-203ENST00000562609 RHBDL1O75783 438 aa11.53□□□□□ -0.56
GTF3C1-203ENST00000562609 PSG3Q16557 428 aa11.53□□□□□ -0.56
GTF3C1-203ENST00000562609 TREML4Q6UXN2 200 aa11.53□□□□□ -0.56
GTF3C1-203ENST00000562609 C2orf91Q6ZV80 131 aa11.53□□□□□ -0.56
GTF3C1-203ENST00000562609 BPIFA4PQ86YQ2 179 aa11.53□□□□□ -0.56
GTF3C1-203ENST00000562609 MKXQ8IYA7 352 aa11.53□□□□□ -0.56
GTF3C1-203ENST00000562609 OR10AG1Q8NH19 301 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms