RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 CD74P04233 296 aa7.67□□□□□ -1.18
CLK3-205ENST00000561673 P0C879 139 aa7.67□□□□□ -1.18
CLK3-205ENST00000561673 TBPP20226 339 aa7.67□□□□□ -1.18
CLK3-205ENST00000561673 SPCS2Q15005 226 aa7.67□□□□□ -1.18
CLK3-205ENST00000561673 SPINK9Q5DT21 86 aa7.67□□□□□ -1.18
CLK3-205ENST00000561673 GPR141Q7Z602 305 aa7.67□□□□□ -1.18
CLK3-205ENST00000561673 TMEM229BQ8NBD8 167 aa7.67□□□□□ -1.18
CLK3-205ENST00000561673 ZNF114Q8NC26 417 aa7.67□□□□□ -1.18
CLK3-205ENST00000561673 C15orf40Q8WUR7 153 aa7.67□□□□□ -1.18
CLK3-205ENST00000561673 SPAG8Q99932 426 aaPredicted RBP7.67□□□□□ -1.18
CLK3-205ENST00000561673 LOC102724200A0A096LPH7 203 aaPredicted RBP7.66□□□□□ -1.18
CLK3-205ENST00000561673 C15orf62A8K5M9 175 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 GABARAPH6UMI1 98 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 NUPL2O15504 423 aaKnown RBP7.66□□□□□ -1.18
CLK3-205ENST00000561673 RGS5O15539 181 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 RAB3DO95716 219 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 MT-CO2P00403 227 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 GHRHP01286 108 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 FCGR2BP31994 310 aaPredicted RBP7.66□□□□□ -1.18
CLK3-205ENST00000561673 PPP5CP53041 499 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 MFAP4P55083 255 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 TAS2R19P59542 299 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 ERHP84090 104 aaKnown RBP7.66□□□□□ -1.18
CLK3-205ENST00000561673 RELQ04864 619 aaPredicted RBP7.66□□□□□ -1.18
CLK3-205ENST00000561673 SP6Q3SY56 376 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 SCGB2B2Q4G0G5 96 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 LAMTOR1Q6IAA8 161 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 STEAP1BQ6NZ63 245 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 OR13C8Q8NGS7 320 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 ZFAND1Q8TCF1 268 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 PINX1Q96BK5 328 aaKnown RBP7.66□□□□□ -1.18
CLK3-205ENST00000561673 TXN2Q99757 166 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 OVOL2Q9BRP0 275 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 GGTLC1Q9BX51 225 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 COPZ2Q9P299 210 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 UBQLN2Q9UHD9 624 aa7.66□□□□□ -1.18
CLK3-205ENST00000561673 LCE6AA0A183 80 aa7.65□□□□□ -1.18
CLK3-205ENST00000561673 ST8SIA3O43173 380 aa7.65□□□□□ -1.18
CLK3-205ENST00000561673 YIF1AO95070 293 aa7.65□□□□□ -1.18
CLK3-205ENST00000561673 FAAP20Q6NZ36 180 aa7.65□□□□□ -1.18
CLK3-205ENST00000561673 MARCH1Q8TCQ1 289 aa7.65□□□□□ -1.18
CLK3-205ENST00000561673 OR10C1Q96KK4 312 aa7.65□□□□□ -1.18
CLK3-205ENST00000561673 RNF2Q99496 336 aa7.65□□□□□ -1.18
CLK3-205ENST00000561673 NXF2Q9GZY0 626 aaKnown RBP7.65□□□□□ -1.18
CLK3-205ENST00000561673 SMPXQ9UHP9 88 aa7.65□□□□□ -1.18
CLK3-205ENST00000561673 TRAV14DV4A0A0A6YYC5 116 aa7.64□□□□□ -1.19
CLK3-205ENST00000561673 IGHV7-4-1A0A0J9YVY3 117 aa7.64□□□□□ -1.19
CLK3-205ENST00000561673 INS-IGF2F8WCM5 200 aa7.64□□□□□ -1.19
CLK3-205ENST00000561673 CHEK1O14757 476 aa7.64□□□□□ -1.19
CLK3-205ENST00000561673 GNG7O60262 68 aa7.64□□□□□ -1.19
CLK3-205ENST00000561673 ATG12O94817 140 aa7.64□□□□□ -1.19
CLK3-205ENST00000561673 IFNA17P01571 189 aa7.64□□□□□ -1.19
CLK3-205ENST00000561673 CTSDP07339 412 aaPredicted RBP7.64□□□□□ -1.19
CLK3-205ENST00000561673 UCP1P25874 307 aa7.64□□□□□ -1.19
CLK3-205ENST00000561673 SNCAP37840 140 aa7.64□□□□□ -1.19
CLK3-205ENST00000561673 ETV6P41212 452 aa7.64□□□□□ -1.19
CLK3-205ENST00000561673 AKR1C2P52895 323 aa7.64□□□□□ -1.19
CLK3-205ENST00000561673 MRPS10P82664 201 aaKnown RBP7.64□□□□□ -1.19
CLK3-205ENST00000561673 SSBP1Q04837 148 aaKnown RBP7.64□□□□□ -1.19
CLK3-205ENST00000561673 TRIM16LQ309B1 348 aa7.64□□□□□ -1.19
CLK3-205ENST00000561673 ODF3L2Q3SX64 289 aa7.64□□□□□ -1.19
CLK3-205ENST00000561673 PVRIGQ6DKI7 326 aa7.64□□□□□ -1.19
CLK3-205ENST00000561673 Q6ZRM9 215 aa7.64□□□□□ -1.19
CLK3-205ENST00000561673 CLVS1Q8IUQ0 354 aaPredicted RBP7.64□□□□□ -1.19
CLK3-205ENST00000561673 CCDC71LQ8N9Z2 235 aa7.64□□□□□ -1.19
CLK3-205ENST00000561673 TMEM116Q8NCL8 245 aa7.64□□□□□ -1.19
CLK3-205ENST00000561673 RTBDNQ9BSG5 229 aaPredicted RBP7.64□□□□□ -1.19
CLK3-205ENST00000561673 RHPN1-AS1Q9BWJ2 59 aa7.64□□□□□ -1.19
CLK3-205ENST00000561673 TMA7Q9Y2S6 64 aaKnown RBP7.64□□□□□ -1.19
CLK3-205ENST00000561673 EPPK1P58107 5090 aaKnown RBP7.63□□□□□ -1.19
CLK3-205ENST00000561673 IGHV3-49A0A0A0MS15 119 aa7.63□□□□□ -1.19
CLK3-205ENST00000561673 A0A0G2JRQ6 117 aa7.63□□□□□ -1.19
CLK3-205ENST00000561673 CTDSPLO15194 276 aa7.63□□□□□ -1.19
CLK3-205ENST00000561673 B3GALNT1O75752 331 aa7.63□□□□□ -1.19
CLK3-205ENST00000561673 MEF2DQ14814 521 aa7.63□□□□□ -1.19
CLK3-205ENST00000561673 SLC35G3Q8N808 338 aa7.63□□□□□ -1.19
CLK3-205ENST00000561673 DUSP18Q8NEJ0 188 aa7.63□□□□□ -1.19
CLK3-205ENST00000561673 IL17DQ8TAD2 202 aa7.63□□□□□ -1.19
CLK3-205ENST00000561673 DYNC2LI1Q8TCX1 351 aa7.63□□□□□ -1.19
CLK3-205ENST00000561673 GLYATL2Q8WU03 294 aa7.63□□□□□ -1.19
CLK3-205ENST00000561673 RAB2BQ8WUD1 216 aa7.63□□□□□ -1.19
CLK3-205ENST00000561673 SMIM4Q8WVI0 70 aa7.63□□□□□ -1.19
CLK3-205ENST00000561673 ANAPC16Q96DE5 110 aa7.63□□□□□ -1.19
CLK3-205ENST00000561673 RRNAD1Q96FB5 475 aaKnown RBP7.63□□□□□ -1.19
CLK3-205ENST00000561673 DIRAS2Q96HU8 199 aa7.63□□□□□ -1.19
CLK3-205ENST00000561673 TMEM222Q9H0R3 208 aa7.63□□□□□ -1.19
CLK3-205ENST00000561673 ALMS1Q8TCU4 4167 aa7.63□□□□□ -1.19
CLK3-205ENST00000561673 IGHV3OR16-13A0A075B7E8 117 aa7.62□□□□□ -1.19
CLK3-205ENST00000561673 IGHV3-74A0A0B4J1X5 117 aa7.62□□□□□ -1.19
CLK3-205ENST00000561673 TEX13DA0A0J9YY54 714 aaPredicted RBP7.62□□□□□ -1.19
CLK3-205ENST00000561673 OR4C46A6NHA9 309 aa7.62□□□□□ -1.19
CLK3-205ENST00000561673 DISC1C4P0D8 188 aa7.62□□□□□ -1.19
CLK3-205ENST00000561673 CDS2O95674 445 aa7.62□□□□□ -1.19
CLK3-205ENST00000561673 TMEM50AO95807 157 aa7.62□□□□□ -1.19
CLK3-205ENST00000561673 OR5AC1P0C628 307 aa7.62□□□□□ -1.19
CLK3-205ENST00000561673 RNASE2P10153 161 aaKnown RBP7.62□□□□□ -1.19
CLK3-205ENST00000561673 NPBWR1P48145 328 aa7.62□□□□□ -1.19
CLK3-205ENST00000561673 SUB1P53999 127 aaKnown RBP eCLIP7.62□□□□□ -1.19
CLK3-205ENST00000561673 APOC4P55056 127 aa7.62□□□□□ -1.19
CLK3-205ENST00000561673 TMBIM6P55061 237 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms