RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 DOCK5Q9H7D0 1870 aa0.41□□□□□ -2.34
HMBOX1-216ENST00000561377 CNTRLQ7Z7A1 2325 aa0.4□□□□□ -2.35
HMBOX1-216ENST00000561377 EML5Q05BV3 1969 aa0.4□□□□□ -2.35
HMBOX1-216ENST00000561377 A0A0D9SG52 128 aa0.4□□□□□ -2.35
HMBOX1-216ENST00000561377 OR2T1O43869 369 aa0.4□□□□□ -2.35
HMBOX1-216ENST00000561377 OR1I1O60431 355 aa0.4□□□□□ -2.35
HMBOX1-216ENST00000561377 HYPMO75409 117 aa0.4□□□□□ -2.35
HMBOX1-216ENST00000561377 RPS12P25398 132 aaKnown RBP0.4□□□□□ -2.35
HMBOX1-216ENST00000561377 BRS3P32247 399 aa0.4□□□□□ -2.35
HMBOX1-216ENST00000561377 AP2S1P53680 142 aaPredicted RBP0.4□□□□□ -2.35
HMBOX1-216ENST00000561377 IQCF2Q8IXL9 164 aa0.4□□□□□ -2.35
HMBOX1-216ENST00000561377 WFDC11Q8NEX6 87 aa0.4□□□□□ -2.35
HMBOX1-216ENST00000561377 SLC35B4Q969S0 331 aa0.4□□□□□ -2.35
HMBOX1-216ENST00000561377 OR52E6Q96RD3 313 aa0.4□□□□□ -2.35
HMBOX1-216ENST00000561377 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 TRBV6-7A0A0A0MS04 114 aa0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 C2orf70A6NJV1 201 aa0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 INE1O15225 51 aa0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 FADS1O60427 444 aa0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 BAALC-AS2P0C853 105 aa0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 EIF2B2P49770 351 aaKnown RBP0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 LINC00471Q8N535 108 aa0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 OR5B17Q8NGF7 314 aa0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 TERB2Q8NHR7 220 aa0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 OBSCN-AS1Q96MR7 158 aa0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 NIPSNAP1Q9BPW8 284 aa0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 SLC50A1Q9BRV3 221 aa0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 C20orf27Q9GZN8 174 aa0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 DRC3Q9H069 523 aa0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 NKIRAS1Q9NYS0 192 aa0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 LSM5Q9Y4Y9 91 aaKnown RBP0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 ATP6V1DQ9Y5K8 247 aa0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 NUP155O75694 1391 aa0.39□□□□□ -2.35
HMBOX1-216ENST00000561377 NEO1Q92859 1461 aa0.38□□□□□ -2.35
HMBOX1-216ENST00000561377 IGKV1D-42A0A075B6H8 117 aa0.38□□□□□ -2.35
HMBOX1-216ENST00000561377 EEF1E1-BLOC1S5C9J1V9 151 aa0.38□□□□□ -2.35
HMBOX1-216ENST00000561377 CETN3O15182 167 aa0.38□□□□□ -2.35
HMBOX1-216ENST00000561377 TCL1BO95988 128 aa0.38□□□□□ -2.35
HMBOX1-216ENST00000561377 IFNA10P01566 189 aa0.38□□□□□ -2.35
HMBOX1-216ENST00000561377 FKBP2P26885 142 aaKnown RBP0.38□□□□□ -2.35
HMBOX1-216ENST00000561377 RAB4BP61018 213 aa0.38□□□□□ -2.35
HMBOX1-216ENST00000561377 MIR17HGQ75NE6 70 aa0.38□□□□□ -2.35
HMBOX1-216ENST00000561377 LINC00311Q8N616 119 aa0.38□□□□□ -2.35
HMBOX1-216ENST00000561377 TMEM86BQ8N661 226 aa0.38□□□□□ -2.35
HMBOX1-216ENST00000561377 PTH2Q96A98 100 aa0.38□□□□□ -2.35
HMBOX1-216ENST00000561377 PRTFDC1Q9NRG1 225 aa0.38□□□□□ -2.35
HMBOX1-216ENST00000561377 PEAK1Q9H792 1746 aa0.38□□□□□ -2.35
HMBOX1-216ENST00000561377 EVC2Q86UK5 1308 aa0.38□□□□□ -2.35
HMBOX1-216ENST00000561377 SNAPC4Q5SXM2 1469 aa0.37□□□□□ -2.35
HMBOX1-216ENST00000561377 SCN3AQ9NY46 2000 aa0.37□□□□□ -2.35
HMBOX1-216ENST00000561377 KCNK1O00180 336 aa0.37□□□□□ -2.35
HMBOX1-216ENST00000561377 OR2B3O76000 313 aa0.37□□□□□ -2.35
HMBOX1-216ENST00000561377 HIST1H1TP22492 207 aaPredicted RBP0.37□□□□□ -2.35
HMBOX1-216ENST00000561377 CASQ1P31415 396 aa0.37□□□□□ -2.35
HMBOX1-216ENST00000561377 RHOGP84095 191 aa0.37□□□□□ -2.35
HMBOX1-216ENST00000561377 OR2F1Q13607 317 aa0.37□□□□□ -2.35
HMBOX1-216ENST00000561377 C20orf196Q8IYI0 205 aa0.37□□□□□ -2.35
HMBOX1-216ENST00000561377 Q8N814 137 aa0.37□□□□□ -2.35
HMBOX1-216ENST00000561377 OR2T4Q8NH00 348 aa0.37□□□□□ -2.35
HMBOX1-216ENST00000561377 TOMM6Q96B49 74 aa0.37□□□□□ -2.35
HMBOX1-216ENST00000561377 LLPHQ9BRT6 129 aaKnown RBP0.37□□□□□ -2.35
HMBOX1-216ENST00000561377 FBXL12Q9NXK8 326 aa0.37□□□□□ -2.35
HMBOX1-216ENST00000561377 TP73-AS1Q9UF72 201 aa0.37□□□□□ -2.35
HMBOX1-216ENST00000561377 KLK9Q9UKQ9 250 aa0.37□□□□□ -2.35
HMBOX1-216ENST00000561377 HS3ST2Q9Y278 367 aa0.37□□□□□ -2.35
HMBOX1-216ENST00000561377 ZFP30Q9Y2G7 519 aa0.37□□□□□ -2.35
HMBOX1-216ENST00000561377 SCN10AQ9Y5Y9 1956 aa0.36□□□□□ -2.35
HMBOX1-216ENST00000561377 HLA-DRB1P01911 266 aa0.36□□□□□ -2.35
HMBOX1-216ENST00000561377 ASAH2BP0C7U1 165 aa0.36□□□□□ -2.35
HMBOX1-216ENST00000561377 PSME3P61289 254 aa0.36□□□□□ -2.35
HMBOX1-216ENST00000561377 SNRPD2P62316 118 aaKnown RBP0.36□□□□□ -2.35
HMBOX1-216ENST00000561377 HBA1P69905 142 aa0.36□□□□□ -2.35
HMBOX1-216ENST00000561377 GDF5OSQ5U4N7 250 aa0.36□□□□□ -2.35
HMBOX1-216ENST00000561377 TAS2R4Q9NYW5 299 aa0.36□□□□□ -2.35
HMBOX1-216ENST00000561377 KIAA1549Q9HCM3 1950 aa0.36□□□□□ -2.35
HMBOX1-216ENST00000561377 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
HMBOX1-216ENST00000561377 ZNF106Q9H2Y7 1883 aaKnown RBP0.35□□□□□ -2.35
HMBOX1-216ENST00000561377 TRAV12-1A0A0B4J245 112 aa0.35□□□□□ -2.35
HMBOX1-216ENST00000561377 TGOLN2O43493 480 aa0.35□□□□□ -2.35
HMBOX1-216ENST00000561377 HIST1H1EP10412 219 aaKnown RBP0.35□□□□□ -2.35
HMBOX1-216ENST00000561377 CRYGAP11844 174 aa0.35□□□□□ -2.35
HMBOX1-216ENST00000561377 ZNF93P35789 620 aaPredicted RBP0.35□□□□□ -2.35
HMBOX1-216ENST00000561377 RHEBQ15382 184 aa0.35□□□□□ -2.35
HMBOX1-216ENST00000561377 KRTAP21-1Q3LI58 79 aa0.35□□□□□ -2.35
HMBOX1-216ENST00000561377 LPCAT3Q6P1A2 487 aa0.35□□□□□ -2.35
HMBOX1-216ENST00000561377 SIGLECL1Q8N7X8 197 aa0.35□□□□□ -2.35
HMBOX1-216ENST00000561377 OR4E2Q8NGC2 313 aa0.35□□□□□ -2.35
HMBOX1-216ENST00000561377 H1FXQ92522 213 aaKnown RBP0.35□□□□□ -2.35
HMBOX1-216ENST00000561377 TSPAN32Q96QS1 320 aa0.35□□□□□ -2.35
HMBOX1-216ENST00000561377 COMMD5Q9GZQ3 224 aa0.35□□□□□ -2.35
HMBOX1-216ENST00000561377 TMEM56-RWDD3S4R434 201 aa0.35□□□□□ -2.35
HMBOX1-216ENST00000561377 ECM29Q5VYK3 1845 aa0.35□□□□□ -2.35
HMBOX1-216ENST00000561377 DPRXA6NFQ7 191 aa0.34□□□□□ -2.36
HMBOX1-216ENST00000561377 PSMD12O00232 456 aaPredicted RBP0.34□□□□□ -2.36
HMBOX1-216ENST00000561377 LYZL6O75951 148 aa0.34□□□□□ -2.36
HMBOX1-216ENST00000561377 UBL3O95164 117 aa0.34□□□□□ -2.36
HMBOX1-216ENST00000561377 CALB1P05937 261 aa0.34□□□□□ -2.36
HMBOX1-216ENST00000561377 TPM3P06753 285 aa0.34□□□□□ -2.36
HMBOX1-216ENST00000561377 SPI1P17947 270 aa0.34□□□□□ -2.36
HMBOX1-216ENST00000561377 TCL1AP56279 114 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms