RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
USP8-218ENST00000561330 RIC1Q4ADV7 1423 aa0.51□□□□□ -2.33
USP8-218ENST00000561330 KHDC3LQ587J8 217 aa0.51□□□□□ -2.33
USP8-218ENST00000561330 SFXN4Q6P4A7 337 aa0.51□□□□□ -2.33
USP8-218ENST00000561330 MIR17HGQ75NE6 70 aa0.51□□□□□ -2.33
USP8-218ENST00000561330 HEATR5AQ86XA9 2040 aa0.51□□□□□ -2.33
USP8-218ENST00000561330 CLVS1Q8IUQ0 354 aaPredicted RBP0.51□□□□□ -2.33
USP8-218ENST00000561330 SBSPONQ8IVN8 264 aa0.51□□□□□ -2.33
USP8-218ENST00000561330 OR13C4Q8NGS5 318 aa0.51□□□□□ -2.33
USP8-218ENST00000561330 PIK3R4Q99570 1358 aa0.51□□□□□ -2.33
USP8-218ENST00000561330 TMEM147Q9BVK8 224 aa0.51□□□□□ -2.33
USP8-218ENST00000561330 USE1Q9NZ43 259 aa0.51□□□□□ -2.33
USP8-218ENST00000561330 EXPH5Q8NEV8 1989 aa0.5□□□□□ -2.33
USP8-218ENST00000561330 DEXIO95424 95 aa0.5□□□□□ -2.33
USP8-218ENST00000561330 COX6A1P12074 109 aa0.5□□□□□ -2.33
USP8-218ENST00000561330 HBA1P69905 142 aa0.5□□□□□ -2.33
USP8-218ENST00000561330 PMAIP1Q13794 54 aa0.5□□□□□ -2.33
USP8-218ENST00000561330 LRRC25Q8N386 305 aaPredicted RBP0.5□□□□□ -2.33
USP8-218ENST00000561330 Q8N6K4 173 aa0.5□□□□□ -2.33
USP8-218ENST00000561330 OR51D1Q8NGF3 324 aa0.5□□□□□ -2.33
USP8-218ENST00000561330 OR5A1Q8NGJ0 315 aa0.5□□□□□ -2.33
USP8-218ENST00000561330 AMELYQ99218 206 aa0.5□□□□□ -2.33
USP8-218ENST00000561330 MIXL1Q9H2W2 232 aa0.5□□□□□ -2.33
USP8-218ENST00000561330 ACER3Q9NUN7 267 aa0.5□□□□□ -2.33
USP8-218ENST00000561330 TRBV6-8A0A0A6YYG3 113 aa0.49□□□□□ -2.33
USP8-218ENST00000561330 UBL3O95164 117 aa0.49□□□□□ -2.33
USP8-218ENST00000561330 BAALC-AS2P0C853 105 aa0.49□□□□□ -2.33
USP8-218ENST00000561330 SSR2P43308 183 aa0.49□□□□□ -2.33
USP8-218ENST00000561330 MAGEA2P43356 314 aa0.49□□□□□ -2.33
USP8-218ENST00000561330 AP2S1P53680 142 aaPredicted RBP0.49□□□□□ -2.33
USP8-218ENST00000561330 RHOGP84095 191 aa0.49□□□□□ -2.33
USP8-218ENST00000561330 RHEBQ15382 184 aa0.49□□□□□ -2.33
USP8-218ENST00000561330 LPCAT4Q643R3 524 aa0.49□□□□□ -2.33
USP8-218ENST00000561330 CD200R1LQ6Q8B3 271 aa0.49□□□□□ -2.33
USP8-218ENST00000561330 DNAJC9Q8WXX5 260 aa0.49□□□□□ -2.33
USP8-218ENST00000561330 CFAP53Q96M91 514 aa0.49□□□□□ -2.33
USP8-218ENST00000561330 XPNPEP1Q9NQW7 623 aa0.49□□□□□ -2.33
USP8-218ENST00000561330 TP73-AS1Q9UF72 201 aa0.49□□□□□ -2.33
USP8-218ENST00000561330 LSM5Q9Y4Y9 91 aaKnown RBP0.49□□□□□ -2.33
USP8-218ENST00000561330 TNRC6BQ9UPQ9 1833 aaKnown RBP0.48□□□□□ -2.33
USP8-218ENST00000561330 TCL1AP56279 114 aa0.48□□□□□ -2.33
USP8-218ENST00000561330 TERB2Q8NHR7 220 aa0.48□□□□□ -2.33
USP8-218ENST00000561330 SFT2D1Q8WV19 159 aa0.48□□□□□ -2.33
USP8-218ENST00000561330 IMP4Q96G21 291 aaKnown RBP0.48□□□□□ -2.33
USP8-218ENST00000561330 TAS2R4Q9NYW5 299 aa0.48□□□□□ -2.33
USP8-218ENST00000561330 TOPBP1Q92547 1522 aa0.48□□□□□ -2.33
USP8-218ENST00000561330 C9orf84Q5VXU9 1444 aa0.47□□□□□ -2.33
USP8-218ENST00000561330 ANAPC1Q9H1A4 1944 aa0.47□□□□□ -2.33
USP8-218ENST00000561330 EEF1E1-BLOC1S5C9J1V9 151 aa0.47□□□□□ -2.33
USP8-218ENST00000561330 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
USP8-218ENST00000561330 INE1O15225 51 aa0.47□□□□□ -2.33
USP8-218ENST00000561330 ISG15P05161 165 aa0.47□□□□□ -2.33
USP8-218ENST00000561330 OR5G3P0C626 314 aa0.47□□□□□ -2.33
USP8-218ENST00000561330 RNASE10Q5GAN6 216 aaKnown RBP0.47□□□□□ -2.33
USP8-218ENST00000561330 ALKAL1Q6UXT8 129 aa0.47□□□□□ -2.33
USP8-218ENST00000561330 OPTNQ96CV9 577 aa0.47□□□□□ -2.33
USP8-218ENST00000561330 CMTM6Q9NX76 183 aa0.47□□□□□ -2.33
USP8-218ENST00000561330 FBXL12Q9NXK8 326 aa0.47□□□□□ -2.33
USP8-218ENST00000561330 RASL12Q9NYN1 266 aa0.47□□□□□ -2.33
USP8-218ENST00000561330 ADGRB2O60241 1585 aa0.47□□□□□ -2.33
USP8-218ENST00000561330 KCNK1O00180 336 aa0.46□□□□□ -2.34
USP8-218ENST00000561330 TCL1BO95988 128 aa0.46□□□□□ -2.34
USP8-218ENST00000561330 CNBPP62633 177 aaKnown RBP0.46□□□□□ -2.34
USP8-218ENST00000561330 HIST2H3PS2Q5TEC6 136 aa0.46□□□□□ -2.34
USP8-218ENST00000561330 SPATA8Q6RVD6 105 aa0.46□□□□□ -2.34
USP8-218ENST00000561330 SIGLECL1Q8N7X8 197 aa0.46□□□□□ -2.34
USP8-218ENST00000561330 COMMD5Q9GZQ3 224 aa0.46□□□□□ -2.34
USP8-218ENST00000561330 SLC39A9Q9NUM3 307 aa0.46□□□□□ -2.34
USP8-218ENST00000561330 LAMA4Q16363 1823 aa0.45□□□□□ -2.34
USP8-218ENST00000561330 MUC5ACP98088 5654 aa0.45□□□□□ -2.34
USP8-218ENST00000561330 MAST2Q6P0Q8 1798 aa0.45□□□□□ -2.34
USP8-218ENST00000561330 PQLC2LA1A4F0 135 aa0.45□□□□□ -2.34
USP8-218ENST00000561330 DCTN3O75935 186 aa0.45□□□□□ -2.34
USP8-218ENST00000561330 OR2B3O76000 313 aa0.45□□□□□ -2.34
USP8-218ENST00000561330 HLA-DRB1P01911 266 aa0.45□□□□□ -2.34
USP8-218ENST00000561330 MGST1P10620 155 aaKnown RBP0.45□□□□□ -2.34
USP8-218ENST00000561330 LPCAT3Q6P1A2 487 aa0.45□□□□□ -2.34
USP8-218ENST00000561330 BORCS5Q969J3 196 aa0.45□□□□□ -2.34
USP8-218ENST00000561330 SLC35B4Q969S0 331 aa0.45□□□□□ -2.34
USP8-218ENST00000561330 PRTFDC1Q9NRG1 225 aa0.45□□□□□ -2.34
USP8-218ENST00000561330 GPR98Q8WXG9 6306 aa0.45□□□□□ -2.34
USP8-218ENST00000561330 TRAV12-1A0A0B4J245 112 aa0.44□□□□□ -2.34
USP8-218ENST00000561330 DPRXA6NFQ7 191 aa0.44□□□□□ -2.34
USP8-218ENST00000561330 SULT1B1O43704 296 aa0.44□□□□□ -2.34
USP8-218ENST00000561330 LYZL6O75951 148 aa0.44□□□□□ -2.34
USP8-218ENST00000561330 IFNA10P01566 189 aa0.44□□□□□ -2.34
USP8-218ENST00000561330 C20orf196Q8IYI0 205 aa0.44□□□□□ -2.34
USP8-218ENST00000561330 HIST3H2BBQ8N257 126 aa0.44□□□□□ -2.34
USP8-218ENST00000561330 H1FXQ92522 213 aaKnown RBP0.44□□□□□ -2.34
USP8-218ENST00000561330 TOMM6Q96B49 74 aa0.44□□□□□ -2.34
USP8-218ENST00000561330 NIPSNAP1Q9BPW8 284 aa0.44□□□□□ -2.34
USP8-218ENST00000561330 C11orf68Q9H3H3 251 aaKnown RBP0.44□□□□□ -2.34
USP8-218ENST00000561330 MDN1Q9NU22 5596 aa0.43□□□□□ -2.34
USP8-218ENST00000561330 NCR3O14931 201 aa0.43□□□□□ -2.34
USP8-218ENST00000561330 PROSCO94903 275 aa0.43□□□□□ -2.34
USP8-218ENST00000561330 ZNF25P17030 456 aaPredicted RBP0.43□□□□□ -2.34
USP8-218ENST00000561330 MPV17LQ2QL34 196 aa0.43□□□□□ -2.34
USP8-218ENST00000561330 SOSTDC1Q6X4U4 206 aa0.43□□□□□ -2.34
USP8-218ENST00000561330 CDC42SE1Q9NRR8 79 aa0.43□□□□□ -2.34
USP8-218ENST00000561330 ERGIC3Q9Y282 383 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms