RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 SELENOHQ8IZQ5 122 aaKnown RBP9.46□□□□□ -0.9
CHRNA3-208ENST00000561128 ZFAND1Q8TCF1 268 aa9.46□□□□□ -0.9
CHRNA3-208ENST00000561128 PINX1Q96BK5 328 aaKnown RBP9.46□□□□□ -0.9
CHRNA3-208ENST00000561128 TMEM222Q9H0R3 208 aa9.46□□□□□ -0.9
CHRNA3-208ENST00000561128 FNDC4Q9H6D8 234 aaPredicted RBP9.46□□□□□ -0.9
CHRNA3-208ENST00000561128 FKBP11Q9NYL4 201 aa9.46□□□□□ -0.9
CHRNA3-208ENST00000561128 TECRQ9NZ01 308 aaKnown RBP9.46□□□□□ -0.9
CHRNA3-208ENST00000561128 THYN1Q9P016 225 aa9.46□□□□□ -0.9
CHRNA3-208ENST00000561128 GPR132Q9UNW8 380 aa9.46□□□□□ -0.9
CHRNA3-208ENST00000561128 NBEAL2Q6ZNJ1 2754 aa9.45□□□□□ -0.9
CHRNA3-208ENST00000561128 OR11H12B2RN74 326 aa9.45□□□□□ -0.9
CHRNA3-208ENST00000561128 SUPT4H1P63272 117 aaKnown RBP9.45□□□□□ -0.9
CHRNA3-208ENST00000561128 KLF9Q13886 244 aaPredicted RBP9.45□□□□□ -0.9
CHRNA3-208ENST00000561128 MLANAQ16655 118 aa9.45□□□□□ -0.9
CHRNA3-208ENST00000561128 PVRIGQ6DKI7 326 aa9.45□□□□□ -0.9
CHRNA3-208ENST00000561128 CCDC71LQ8N9Z2 235 aa9.45□□□□□ -0.9
CHRNA3-208ENST00000561128 MUC7Q8TAX7 377 aa9.45□□□□□ -0.9
CHRNA3-208ENST00000561128 C15orf40Q8WUR7 153 aa9.45□□□□□ -0.9
CHRNA3-208ENST00000561128 TMEM170AQ8WVE7 144 aa9.45□□□□□ -0.9
CHRNA3-208ENST00000561128 GPR146Q96CH1 333 aa9.45□□□□□ -0.9
CHRNA3-208ENST00000561128 C20orf24Q9BUV8 137 aa9.45□□□□□ -0.9
CHRNA3-208ENST00000561128 HIPK2Q9H2X6 1198 aa9.45□□□□□ -0.9
CHRNA3-208ENST00000561128 SLC2A8Q9NY64 477 aa9.45□□□□□ -0.9
CHRNA3-208ENST00000561128 IGHV3OR16-13A0A075B7E8 117 aa9.44□□□□□ -0.9
CHRNA3-208ENST00000561128 IGHV3-74A0A0B4J1X5 117 aa9.44□□□□□ -0.9
CHRNA3-208ENST00000561128 DISC1C4P0D8 188 aa9.44□□□□□ -0.9
CHRNA3-208ENST00000561128 NDUFA4O00483 81 aa9.44□□□□□ -0.9
CHRNA3-208ENST00000561128 NOL3O60936 208 aaKnown RBP9.44□□□□□ -0.9
CHRNA3-208ENST00000561128 CDS2O95674 445 aa9.44□□□□□ -0.9
CHRNA3-208ENST00000561128 BSXQ3C1V8 233 aa9.44□□□□□ -0.9
CHRNA3-208ENST00000561128 AARDQ4LEZ3 155 aa9.44□□□□□ -0.9
CHRNA3-208ENST00000561128 TMEM268Q5VZI3 342 aa9.44□□□□□ -0.9
CHRNA3-208ENST00000561128 SLC35G3Q8N808 338 aa9.44□□□□□ -0.9
CHRNA3-208ENST00000561128 TUBA4BQ9H853 241 aa9.44□□□□□ -0.9
CHRNA3-208ENST00000561128 DAZ1Q9NQZ3 744 aaKnown RBP9.44□□□□□ -0.9
CHRNA3-208ENST00000561128 CACNG5Q9UF02 275 aa9.44□□□□□ -0.9
CHRNA3-208ENST00000561128 UBQLN2Q9UHD9 624 aa9.44□□□□□ -0.9
CHRNA3-208ENST00000561128 C14orf166Q9Y224 244 aaKnown RBP9.44□□□□□ -0.9
CHRNA3-208ENST00000561128 UFC1Q9Y3C8 167 aa9.44□□□□□ -0.9
CHRNA3-208ENST00000561128 TEX13DA0A0J9YY54 714 aaPredicted RBP9.43□□□□□ -0.9
CHRNA3-208ENST00000561128 FABP12A6NFH5 140 aa9.43□□□□□ -0.9
CHRNA3-208ENST00000561128 INS-IGF2F8WCM5 200 aa9.43□□□□□ -0.9
CHRNA3-208ENST00000561128 APOHP02749 345 aaPredicted RBP9.43□□□□□ -0.9
CHRNA3-208ENST00000561128 HOXA1P49639 335 aaPredicted RBP9.43□□□□□ -0.9
CHRNA3-208ENST00000561128 ELLP55199 621 aaPredicted RBP9.43□□□□□ -0.9
CHRNA3-208ENST00000561128 TMEM187Q14656 261 aa9.43□□□□□ -0.9
CHRNA3-208ENST00000561128 SURF2Q15527 256 aaPredicted RBP9.43□□□□□ -0.9
CHRNA3-208ENST00000561128 ZNF124Q15973 351 aa9.43□□□□□ -0.9
CHRNA3-208ENST00000561128 ODF3L2Q3SX64 289 aa9.43□□□□□ -0.9
CHRNA3-208ENST00000561128 CASC10Q5T4H9 136 aa9.43□□□□□ -0.9
CHRNA3-208ENST00000561128 ZFAND6Q6FIF0 208 aa9.43□□□□□ -0.9
CHRNA3-208ENST00000561128 SPSB3Q6PJ21 355 aa9.43□□□□□ -0.9
CHRNA3-208ENST00000561128 OR52B4Q8NGK2 314 aa9.43□□□□□ -0.9
CHRNA3-208ENST00000561128 RBPMSQ93062 196 aaKnown RBP9.43□□□□□ -0.9
CHRNA3-208ENST00000561128 ZMAT4Q9H898 229 aa9.43□□□□□ -0.9
CHRNA3-208ENST00000561128 ZFAND3Q9H8U3 227 aa9.43□□□□□ -0.9
CHRNA3-208ENST00000561128 MRPL27Q9P0M9 148 aaKnown RBP9.43□□□□□ -0.9
CHRNA3-208ENST00000561128 A0A1B0GU03 582 aa9.42□□□□□ -0.9
CHRNA3-208ENST00000561128 CCDC160A6NGH7 325 aa9.42□□□□□ -0.9
CHRNA3-208ENST00000561128 CYB5BO43169 146 aa9.42□□□□□ -0.9
CHRNA3-208ENST00000561128 IFNA17P01571 189 aa9.42□□□□□ -0.9
CHRNA3-208ENST00000561128 FCGR2BP31994 310 aaPredicted RBP9.42□□□□□ -0.9
CHRNA3-208ENST00000561128 MFAP4P55083 255 aa9.42□□□□□ -0.9
CHRNA3-208ENST00000561128 CCDC190Q86UF4 302 aa9.42□□□□□ -0.9
CHRNA3-208ENST00000561128 LILRB2Q8N423 598 aa9.42□□□□□ -0.9
CHRNA3-208ENST00000561128 RNASE11Q8TAA1 199 aaKnown RBP9.42□□□□□ -0.9
CHRNA3-208ENST00000561128 MARC2Q969Z3 335 aa9.42□□□□□ -0.9
CHRNA3-208ENST00000561128 OR10C1Q96KK4 312 aa9.42□□□□□ -0.9
CHRNA3-208ENST00000561128 RNF2Q99496 336 aa9.42□□□□□ -0.9
CHRNA3-208ENST00000561128 SPATA25Q9BR10 227 aa9.42□□□□□ -0.9
CHRNA3-208ENST00000561128 PALMDQ9NP74 551 aa9.42□□□□□ -0.9
CHRNA3-208ENST00000561128 MCUBQ9NWR8 336 aa9.42□□□□□ -0.9
CHRNA3-208ENST00000561128 RSL24D1Q9UHA3 163 aaKnown RBP9.42□□□□□ -0.9
CHRNA3-208ENST00000561128 SMPXQ9UHP9 88 aa9.42□□□□□ -0.9
CHRNA3-208ENST00000561128 IGHV3-66A0A0C4DH42 116 aa9.41□□□□□ -0.9
CHRNA3-208ENST00000561128 CHEK1O14757 476 aa9.41□□□□□ -0.9
CHRNA3-208ENST00000561128 PYDC2Q56P42 97 aa9.41□□□□□ -0.9
CHRNA3-208ENST00000561128 TOMM20LQ6UXN7 152 aa9.41□□□□□ -0.9
CHRNA3-208ENST00000561128 OR1L6Q8NGR2 347 aa9.41□□□□□ -0.9
CHRNA3-208ENST00000561128 RRNAD1Q96FB5 475 aaKnown RBP9.41□□□□□ -0.9
CHRNA3-208ENST00000561128 ATP6V0BQ99437 205 aa9.41□□□□□ -0.9
CHRNA3-208ENST00000561128 PRRT1Q99946 306 aa9.41□□□□□ -0.9
CHRNA3-208ENST00000561128 TMEM56-RWDD3S4R434 201 aa9.41□□□□□ -0.9
CHRNA3-208ENST00000561128 IGKV3-7A0A075B6H7 116 aa9.4□□□□□ -0.9
CHRNA3-208ENST00000561128 IGHV7-4-1A0A0J9YVY3 117 aa9.4□□□□□ -0.9
CHRNA3-208ENST00000561128 C15orf62A8K5M9 175 aa9.4□□□□□ -0.9
CHRNA3-208ENST00000561128 K7EMT4 169 aa9.4□□□□□ -0.9
CHRNA3-208ENST00000561128 TSPAN4O14817 238 aa9.4□□□□□ -0.9
CHRNA3-208ENST00000561128 NUPL2O15504 423 aaKnown RBP9.4□□□□□ -0.9
CHRNA3-208ENST00000561128 GNG7O60262 68 aa9.4□□□□□ -0.9
CHRNA3-208ENST00000561128 ERHP84090 104 aaKnown RBP9.4□□□□□ -0.9
CHRNA3-208ENST00000561128 NMSQ5H8A3 153 aa9.4□□□□□ -0.9
CHRNA3-208ENST00000561128 LYZL2Q7Z4W2 148 aa9.4□□□□□ -0.9
CHRNA3-208ENST00000561128 ST8SIA2Q92186 375 aa9.4□□□□□ -0.9
CHRNA3-208ENST00000561128 GALNT14Q96FL9 552 aa9.4□□□□□ -0.9
CHRNA3-208ENST00000561128 SDHCQ99643 169 aaPredicted RBP9.4□□□□□ -0.9
CHRNA3-208ENST00000561128 RHPN1-AS1Q9BWJ2 59 aa9.4□□□□□ -0.9
CHRNA3-208ENST00000561128 RYR3Q15413 4870 aa9.4□□□□□ -0.9
CHRNA3-208ENST00000561128 DNAH7Q8WXX0 4024 aa9.4□□□□□ -0.9
CHRNA3-208ENST00000561128 TRAV25A0A0B4J276 109 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms