RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ELLP55199 621 aaPredicted RBP12.05□□□□□ -0.48
LMX1B-204ENST00000561065 ZNF57Q68EA5 555 aaPredicted RBP12.05□□□□□ -0.48
LMX1B-204ENST00000561065 CCDC190Q86UF4 302 aa12.05□□□□□ -0.48
LMX1B-204ENST00000561065 NOXA1Q86UR1 476 aa12.05□□□□□ -0.48
LMX1B-204ENST00000561065 ZNF114Q8NC26 417 aa12.05□□□□□ -0.48
LMX1B-204ENST00000561065 MUC7Q8TAX7 377 aa12.05□□□□□ -0.48
LMX1B-204ENST00000561065 GALNT14Q96FL9 552 aa12.05□□□□□ -0.48
LMX1B-204ENST00000561065 WFDC10AQ9H1F0 79 aa12.05□□□□□ -0.48
LMX1B-204ENST00000561065 TMEM213A2RRL7 107 aa12.04□□□□□ -0.48
LMX1B-204ENST00000561065 NAP1L6A6NFF2 107 aa12.04□□□□□ -0.48
LMX1B-204ENST00000561065 ZNF785A8K8V0 405 aa12.04□□□□□ -0.48
LMX1B-204ENST00000561065 INS-IGF2F8WCM5 200 aa12.04□□□□□ -0.48
LMX1B-204ENST00000561065 C3orf84H3BNL1 204 aa12.04□□□□□ -0.48
LMX1B-204ENST00000561065 NUPL2O15504 423 aaKnown RBP12.04□□□□□ -0.48
LMX1B-204ENST00000561065 TGOLN2O43493 480 aa12.04□□□□□ -0.48
LMX1B-204ENST00000561065 AKR1C4P17516 323 aa12.04□□□□□ -0.48
LMX1B-204ENST00000561065 GPR183P32249 361 aa12.04□□□□□ -0.48
LMX1B-204ENST00000561065 SPCS3P61009 180 aa12.04□□□□□ -0.48
LMX1B-204ENST00000561065 RELQ04864 619 aaPredicted RBP12.04□□□□□ -0.48
LMX1B-204ENST00000561065 TRIQKQ629K1 86 aa12.04□□□□□ -0.48
LMX1B-204ENST00000561065 OR52E5Q8NH55 327 aa12.04□□□□□ -0.48
LMX1B-204ENST00000561065 ZMAT4Q9H898 229 aa12.04□□□□□ -0.48
LMX1B-204ENST00000561065 A0A0B4J293 547 aa12.03□□□□□ -0.48
LMX1B-204ENST00000561065 ST8SIA3O43173 380 aa12.03□□□□□ -0.48
LMX1B-204ENST00000561065 IGKV1-5P01602 117 aa12.03□□□□□ -0.48
LMX1B-204ENST00000561065 CD7P09564 240 aa12.03□□□□□ -0.48
LMX1B-204ENST00000561065 FOLR2P14207 255 aa12.03□□□□□ -0.48
LMX1B-204ENST00000561065 NPBWR1P48145 328 aa12.03□□□□□ -0.48
LMX1B-204ENST00000561065 HOXA1P49639 335 aaPredicted RBP12.03□□□□□ -0.48
LMX1B-204ENST00000561065 HAGHQ16775 308 aa12.03□□□□□ -0.48
LMX1B-204ENST00000561065 DEFB114Q30KQ6 69 aa12.03□□□□□ -0.48
LMX1B-204ENST00000561065 ANKRD55Q3KP44 614 aa12.03□□□□□ -0.48
LMX1B-204ENST00000561065 Q56UQ5 140 aa12.03□□□□□ -0.48
LMX1B-204ENST00000561065 TMEM128Q5BJH2 165 aa12.03□□□□□ -0.48
LMX1B-204ENST00000561065 TMEM268Q5VZI3 342 aa12.03□□□□□ -0.48
LMX1B-204ENST00000561065 LGI3Q8N145 548 aa12.03□□□□□ -0.48
LMX1B-204ENST00000561065 SCARB1Q8WTV0 552 aa12.03□□□□□ -0.48
LMX1B-204ENST00000561065 MISP3Q96FF7 219 aa12.03□□□□□ -0.48
LMX1B-204ENST00000561065 ZC4H2Q9NQZ6 224 aa12.03□□□□□ -0.48
LMX1B-204ENST00000561065 MRPL27Q9P0M9 148 aaKnown RBP12.03□□□□□ -0.48
LMX1B-204ENST00000561065 TMEM56-RWDD3S4R434 201 aa12.03□□□□□ -0.48
LMX1B-204ENST00000561065 V9GYH0 126 aa12.03□□□□□ -0.48
LMX1B-204ENST00000561065 DNAH1Q9P2D7 4330 aa12.02□□□□□ -0.48
LMX1B-204ENST00000561065 DBX1A6NMT0 343 aa12.02□□□□□ -0.49
LMX1B-204ENST00000561065 A8MWP6 167 aa12.02□□□□□ -0.49
LMX1B-204ENST00000561065 CBLN1P23435 193 aa12.02□□□□□ -0.49
LMX1B-204ENST00000561065 MFAP2P55001 183 aa12.02□□□□□ -0.49
LMX1B-204ENST00000561065 CD81P60033 236 aa12.02□□□□□ -0.49
LMX1B-204ENST00000561065 KLF9Q13886 244 aaPredicted RBP12.02□□□□□ -0.49
LMX1B-204ENST00000561065 CNPY1Q3B7I2 92 aa12.02□□□□□ -0.49
LMX1B-204ENST00000561065 CASC10Q5T4H9 136 aa12.02□□□□□ -0.49
LMX1B-204ENST00000561065 UNQ9165/PRO28630Q6UXU0 137 aa12.02□□□□□ -0.49
LMX1B-204ENST00000561065 SELENOHQ8IZQ5 122 aaKnown RBP12.02□□□□□ -0.49
LMX1B-204ENST00000561065 UBAC2Q8NBM4 344 aa12.02□□□□□ -0.49
LMX1B-204ENST00000561065 DUSP18Q8NEJ0 188 aa12.02□□□□□ -0.49
LMX1B-204ENST00000561065 WDR89Q96FK6 387 aaPredicted RBP12.02□□□□□ -0.49
LMX1B-204ENST00000561065 CITED4Q96RK1 184 aa12.02□□□□□ -0.49
LMX1B-204ENST00000561065 HIPK2Q9H2X6 1198 aa12.02□□□□□ -0.49
LMX1B-204ENST00000561065 EDA2RQ9HAV5 297 aa12.02□□□□□ -0.49
LMX1B-204ENST00000561065 OR2T8A6NH00 312 aa12.01□□□□□ -0.49
LMX1B-204ENST00000561065 NDUFA4O00483 81 aa12.01□□□□□ -0.49
LMX1B-204ENST00000561065 P0C879 139 aa12.01□□□□□ -0.49
LMX1B-204ENST00000561065 SULT1A3P0DMM9 295 aa12.01□□□□□ -0.49
LMX1B-204ENST00000561065 SULT1A4P0DMN0 295 aa12.01□□□□□ -0.49
LMX1B-204ENST00000561065 FCGR2BP31994 310 aaPredicted RBP12.01□□□□□ -0.49
LMX1B-204ENST00000561065 HTR2BP41595 481 aa12.01□□□□□ -0.49
LMX1B-204ENST00000561065 LINC00322Q6ZN03 302 aaPredicted RBP12.01□□□□□ -0.49
LMX1B-204ENST00000561065 NEURL2Q9BR09 285 aa12.01□□□□□ -0.49
LMX1B-204ENST00000561065 TUBA4BQ9H853 241 aa12.01□□□□□ -0.49
LMX1B-204ENST00000561065 RETNQ9HD89 108 aa12.01□□□□□ -0.49
LMX1B-204ENST00000561065 HEYLQ9NQ87 328 aaPredicted RBP12.01□□□□□ -0.49
LMX1B-204ENST00000561065 MLXQ9UH92 298 aa12.01□□□□□ -0.49
LMX1B-204ENST00000561065 TRAV25A0A0B4J276 109 aa12□□□□□ -0.49
LMX1B-204ENST00000561065 A0A0B4J2A0 478 aa12□□□□□ -0.49
LMX1B-204ENST00000561065 DUXBA0A1W2PPF3 345 aa12□□□□□ -0.49
LMX1B-204ENST00000561065 GNG7O60262 68 aa12□□□□□ -0.49
LMX1B-204ENST00000561065 BMI1P35226 326 aa12□□□□□ -0.49
LMX1B-204ENST00000561065 CCR6P51684 374 aa12□□□□□ -0.49
LMX1B-204ENST00000561065 RBMS2Q15434 407 aaKnown RBP12□□□□□ -0.49
LMX1B-204ENST00000561065 ZNF79Q15937 498 aa12□□□□□ -0.49
LMX1B-204ENST00000561065 LAMTOR1Q6IAA8 161 aa12□□□□□ -0.49
LMX1B-204ENST00000561065 RBPMS2Q6ZRY4 209 aaKnown RBP12□□□□□ -0.49
LMX1B-204ENST00000561065 TMEM61Q8N0U2 210 aa12□□□□□ -0.49
LMX1B-204ENST00000561065 TRIM63Q969Q1 353 aa12□□□□□ -0.49
LMX1B-204ENST00000561065 PINX1Q96BK5 328 aaKnown RBP12□□□□□ -0.49
LMX1B-204ENST00000561065 C7orf50Q9BRJ6 194 aaKnown RBP12□□□□□ -0.49
LMX1B-204ENST00000561065 SHPKQ9UHJ6 478 aa12□□□□□ -0.49
LMX1B-204ENST00000561065 TENM2Q9NT68 2774 aa11.99□□□□□ -0.49
LMX1B-204ENST00000561065 IGHV3-35A0A0C4DH35 117 aa11.99□□□□□ -0.49
LMX1B-204ENST00000561065 RPS10-NUDT3A0A1W2PQS6 291 aa11.99□□□□□ -0.49
LMX1B-204ENST00000561065 CEBPZOSA8MTT3 80 aa11.99□□□□□ -0.49
LMX1B-204ENST00000561065 K7EIM0 57 aa11.99□□□□□ -0.49
LMX1B-204ENST00000561065 K7EMT4 169 aa11.99□□□□□ -0.49
LMX1B-204ENST00000561065 MT-CO2P00403 227 aa11.99□□□□□ -0.49
LMX1B-204ENST00000561065 ATP5IP56385 69 aaPredicted RBP11.99□□□□□ -0.49
LMX1B-204ENST00000561065 UBE2MP61081 183 aaKnown RBP11.99□□□□□ -0.49
LMX1B-204ENST00000561065 TMEM187Q14656 261 aa11.99□□□□□ -0.49
LMX1B-204ENST00000561065 AARDQ4LEZ3 155 aa11.99□□□□□ -0.49
LMX1B-204ENST00000561065 TM4SF20Q53R12 229 aa11.99□□□□□ -0.49
LMX1B-204ENST00000561065 SLC16A13Q7RTY0 426 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms