RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 KRASP01116 189 aa13.34□□□□□ -0.27
TPM1-226ENST00000560959 APOHP02749 345 aaPredicted RBP13.34□□□□□ -0.27
TPM1-226ENST00000560959 NPY1RP25929 384 aa13.34□□□□□ -0.27
TPM1-226ENST00000560959 RPL11P62913 178 aaKnown RBP13.34□□□□□ -0.27
TPM1-226ENST00000560959 SOHLH1Q5JUK2 328 aa13.34□□□□□ -0.27
TPM1-226ENST00000560959 TPRA1Q86W33 373 aa13.34□□□□□ -0.27
TPM1-226ENST00000560959 NSG2Q9Y328 171 aa13.34□□□□□ -0.27
TPM1-226ENST00000560959 PGLYRP1O75594 196 aaPredicted RBP13.33□□□□□ -0.28
TPM1-226ENST00000560959 CD74P04233 296 aa13.33□□□□□ -0.28
TPM1-226ENST00000560959 C4BPBP20851 252 aa13.33□□□□□ -0.28
TPM1-226ENST00000560959 LPAR6P43657 344 aa13.33□□□□□ -0.28
TPM1-226ENST00000560959 C22orf42Q6IC83 251 aa13.33□□□□□ -0.28
TPM1-226ENST00000560959 OR5AP2Q8NGF4 316 aa13.33□□□□□ -0.28
TPM1-226ENST00000560959 FCAMRQ8WWV6 532 aa13.33□□□□□ -0.28
TPM1-226ENST00000560959 MISP3Q96FF7 219 aa13.33□□□□□ -0.28
TPM1-226ENST00000560959 FAM210BQ96KR6 192 aa13.33□□□□□ -0.28
TPM1-226ENST00000560959 CELA1Q9UNI1 258 aa13.33□□□□□ -0.28
TPM1-226ENST00000560959 A0A0A6YYH2 397 aa13.32□□□□□ -0.28
TPM1-226ENST00000560959 A0A1W2PS18 150 aa13.32□□□□□ -0.28
TPM1-226ENST00000560959 A6NJ64 397 aa13.32□□□□□ -0.28
TPM1-226ENST00000560959 K7EQG2 157 aa13.32□□□□□ -0.28
TPM1-226ENST00000560959 IFNA10P01566 189 aa13.32□□□□□ -0.28
TPM1-226ENST00000560959 IFNA21P01568 189 aa13.32□□□□□ -0.28
TPM1-226ENST00000560959 IFNA17P01571 189 aa13.32□□□□□ -0.28
TPM1-226ENST00000560959 G6PCP35575 357 aa13.32□□□□□ -0.28
TPM1-226ENST00000560959 NPBWR1P48145 328 aa13.32□□□□□ -0.28
TPM1-226ENST00000560959 SCAND1P57086 179 aa13.32□□□□□ -0.28
TPM1-226ENST00000560959 UBE2UQ5VVX9 321 aa13.32□□□□□ -0.28
TPM1-226ENST00000560959 DHRS11Q6UWP2 260 aa13.32□□□□□ -0.28
TPM1-226ENST00000560959 ZNF600Q6ZNG1 722 aa13.32□□□□□ -0.28
TPM1-226ENST00000560959 TMEM17Q86X19 198 aa13.32□□□□□ -0.28
TPM1-226ENST00000560959 ZNF575Q86XF7 245 aa13.32□□□□□ -0.28
TPM1-226ENST00000560959 ZFAND3Q9H8U3 227 aa13.32□□□□□ -0.28
TPM1-226ENST00000560959 RHBDL2Q9NX52 303 aa13.32□□□□□ -0.28
TPM1-226ENST00000560959 RABAC1Q9UI14 185 aa13.32□□□□□ -0.28
TPM1-226ENST00000560959 EBAG9O00559 213 aa13.31□□□□□ -0.28
TPM1-226ENST00000560959 CDK2AP2O75956 126 aa13.31□□□□□ -0.28
TPM1-226ENST00000560959 NPPCP23582 126 aa13.31□□□□□ -0.28
TPM1-226ENST00000560959 FGF9P31371 208 aaPredicted RBP13.31□□□□□ -0.28
TPM1-226ENST00000560959 CBX5P45973 191 aa13.31□□□□□ -0.28
TPM1-226ENST00000560959 TSPAN14Q8NG11 270 aa13.31□□□□□ -0.28
TPM1-226ENST00000560959 FAM212BQ9NTI7 297 aaPredicted RBP13.31□□□□□ -0.28
TPM1-226ENST00000560959 DAPK2Q9UIK4 370 aa13.31□□□□□ -0.28
TPM1-226ENST00000560959 PUS1Q9Y606 427 aaKnown RBP eCLIP13.31□□□□□ -0.28
TPM1-226ENST00000560959 TRAV18A0A075B6X5 111 aa13.3□□□□□ -0.28
TPM1-226ENST00000560959 DBX1A6NMT0 343 aa13.3□□□□□ -0.28
TPM1-226ENST00000560959 RLN1P04808 185 aa13.3□□□□□ -0.28
TPM1-226ENST00000560959 HERV-K104P61576 105 aa13.3□□□□□ -0.28
TPM1-226ENST00000560959 KCTD21Q4G0X4 260 aa13.3□□□□□ -0.28
TPM1-226ENST00000560959 IGHV3-66A0A0C4DH42 116 aa13.29□□□□□ -0.28
TPM1-226ENST00000560959 SMIM30A4D0T7 59 aa13.29□□□□□ -0.28
TPM1-226ENST00000560959 ERHP84090 104 aaKnown RBP13.29□□□□□ -0.28
TPM1-226ENST00000560959 RNF212Q495C1 297 aa13.29□□□□□ -0.28
TPM1-226ENST00000560959 Q6ZRM9 215 aa13.29□□□□□ -0.28
TPM1-226ENST00000560959 CMTM1Q8IZ96 169 aa13.29□□□□□ -0.28
TPM1-226ENST00000560959 LGALS14Q8TCE9 139 aa13.29□□□□□ -0.28
TPM1-226ENST00000560959 DCANP1Q8TF63 244 aa13.29□□□□□ -0.28
TPM1-226ENST00000560959 MOB3AQ96BX8 217 aa13.29□□□□□ -0.28
TPM1-226ENST00000560959 C1QTNF4Q9BXJ3 329 aa13.29□□□□□ -0.28
TPM1-226ENST00000560959 CLEC5AQ9NY25 188 aa13.29□□□□□ -0.28
TPM1-226ENST00000560959 KNCNA6PVL3 124 aa13.28□□□□□ -0.28
TPM1-226ENST00000560959 TMEM50AO95807 157 aa13.28□□□□□ -0.28
TPM1-226ENST00000560959 IGHV3-48P01763 117 aa13.28□□□□□ -0.28
TPM1-226ENST00000560959 CRYBB3P26998 211 aa13.28□□□□□ -0.28
TPM1-226ENST00000560959 NUTF2P61970 127 aaKnown RBP13.28□□□□□ -0.28
TPM1-226ENST00000560959 PRCDQ00LT1 54 aa13.28□□□□□ -0.28
TPM1-226ENST00000560959 SFXN4Q6P4A7 337 aa13.28□□□□□ -0.28
TPM1-226ENST00000560959 ZNF767PQ75MW2 155 aa13.28□□□□□ -0.28
TPM1-226ENST00000560959 TXNL4BQ9NX01 149 aaKnown RBP13.28□□□□□ -0.28
TPM1-226ENST00000560959 A0A1B0GU03 582 aa13.27□□□□□ -0.29
TPM1-226ENST00000560959 ZNF688P0C7X2 276 aa13.27□□□□□ -0.29
TPM1-226ENST00000560959 HSPE1P61604 102 aaKnown RBP13.27□□□□□ -0.29
TPM1-226ENST00000560959 ACTL10Q5JWF8 245 aa13.27□□□□□ -0.29
TPM1-226ENST00000560959 C1orf134Q5TEV5 83 aa13.27□□□□□ -0.29
TPM1-226ENST00000560959 STXBP6Q8NFX7 210 aa13.27□□□□□ -0.29
TPM1-226ENST00000560959 PINX1Q96BK5 328 aaKnown RBP13.27□□□□□ -0.29
TPM1-226ENST00000560959 NEU1Q99519 415 aa13.27□□□□□ -0.29
TPM1-226ENST00000560959 SCRT1Q9BWW7 348 aa13.27□□□□□ -0.29
TPM1-226ENST00000560959 AUNIPQ9H7T9 357 aa13.27□□□□□ -0.29
TPM1-226ENST00000560959 RRP15Q9Y3B9 282 aaKnown RBP13.27□□□□□ -0.29
TPM1-226ENST00000560959 AGRNO00468 2067 aa13.26□□□□□ -0.29
TPM1-226ENST00000560959 SPART-AS1P0CW21 52 aa13.26□□□□□ -0.29
TPM1-226ENST00000560959 UBE2DNLQ8IWF7 75 aa13.26□□□□□ -0.29
TPM1-226ENST00000560959 OR4A16Q8NH70 328 aa13.26□□□□□ -0.29
TPM1-226ENST00000560959 METTL26Q96S19 204 aa13.26□□□□□ -0.29
TPM1-226ENST00000560959 RAB40CQ96S21 281 aa13.26□□□□□ -0.29
TPM1-226ENST00000560959 DIABLOQ9NR28 239 aa13.26□□□□□ -0.29
TPM1-226ENST00000560959 IGLV2-18A0A075B6J9 118 aa13.25□□□□□ -0.29
TPM1-226ENST00000560959 TMEM189A5PLL7 270 aa13.25□□□□□ -0.29
TPM1-226ENST00000560959 INS-IGF2F8WCM5 200 aa13.25□□□□□ -0.29
TPM1-226ENST00000560959 GPR31O00270 319 aa13.25□□□□□ -0.29
TPM1-226ENST00000560959 P2RY1P47900 373 aa13.25□□□□□ -0.29
TPM1-226ENST00000560959 EIF2B2P49770 351 aaKnown RBP13.25□□□□□ -0.29
TPM1-226ENST00000560959 SLC25A38Q96DW6 304 aa13.25□□□□□ -0.29
TPM1-226ENST00000560959 NARS2Q96I59 477 aaKnown RBP13.25□□□□□ -0.29
TPM1-226ENST00000560959 SEC22AQ96IW7 307 aa13.25□□□□□ -0.29
TPM1-226ENST00000560959 ZNF2Q9BSG1 426 aaPredicted RBP13.25□□□□□ -0.29
TPM1-226ENST00000560959 SEPSECSQ9HD40 501 aaKnown RBP13.25□□□□□ -0.29
TPM1-226ENST00000560959 EHFQ9NZC4 300 aa13.25□□□□□ -0.29
TPM1-226ENST00000560959 BLOC1S6Q9UL45 172 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms