RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 MAGEA2P43356 314 aa0.42□□□□□ -2.34
PSMA4-221ENST00000560842 PMAIP1Q13794 54 aa0.42□□□□□ -2.34
PSMA4-221ENST00000560842 SPANXN5Q5MJ07 72 aa0.42□□□□□ -2.34
PSMA4-221ENST00000560842 IQCF2Q8IXL9 164 aa0.42□□□□□ -2.34
PSMA4-221ENST00000560842 LINC00471Q8N535 108 aa0.42□□□□□ -2.34
PSMA4-221ENST00000560842 LINC00311Q8N616 119 aa0.42□□□□□ -2.34
PSMA4-221ENST00000560842 Q8N814 137 aa0.42□□□□□ -2.34
PSMA4-221ENST00000560842 OR2T4Q8NH00 348 aa0.42□□□□□ -2.34
PSMA4-221ENST00000560842 MCFD2Q8NI22 146 aa0.42□□□□□ -2.34
PSMA4-221ENST00000560842 USE1Q9NZ43 259 aa0.42□□□□□ -2.34
PSMA4-221ENST00000560842 KLK9Q9UKQ9 250 aa0.42□□□□□ -2.34
PSMA4-221ENST00000560842 KIF13BQ9NQT8 1826 aa0.41□□□□□ -2.34
PSMA4-221ENST00000560842 RP1P56715 2156 aa0.41□□□□□ -2.34
PSMA4-221ENST00000560842 INE1O15225 51 aa0.41□□□□□ -2.34
PSMA4-221ENST00000560842 CRYGAP11844 174 aa0.41□□□□□ -2.34
PSMA4-221ENST00000560842 SPI1P17947 270 aa0.41□□□□□ -2.34
PSMA4-221ENST00000560842 ZNF93P35789 620 aaPredicted RBP0.41□□□□□ -2.34
PSMA4-221ENST00000560842 RAB4BP61018 213 aa0.41□□□□□ -2.34
PSMA4-221ENST00000560842 Q8N6K4 173 aa0.41□□□□□ -2.34
PSMA4-221ENST00000560842 TERB2Q8NHR7 220 aa0.41□□□□□ -2.34
PSMA4-221ENST00000560842 CFAP53Q96M91 514 aa0.41□□□□□ -2.34
PSMA4-221ENST00000560842 MDN1Q9NU22 5596 aa0.41□□□□□ -2.34
PSMA4-221ENST00000560842 MCM3APO60318 1980 aa0.41□□□□□ -2.34
PSMA4-221ENST00000560842 PEAK1Q9H792 1746 aa0.41□□□□□ -2.34
PSMA4-221ENST00000560842 EVC2Q86UK5 1308 aa0.4□□□□□ -2.34
PSMA4-221ENST00000560842 EML6Q6ZMW3 1958 aa0.4□□□□□ -2.35
PSMA4-221ENST00000560842 DEXIO95424 95 aa0.4□□□□□ -2.35
PSMA4-221ENST00000560842 ISG15P05161 165 aa0.4□□□□□ -2.35
PSMA4-221ENST00000560842 GDF5OSQ5U4N7 250 aa0.4□□□□□ -2.35
PSMA4-221ENST00000560842 KLK6Q92876 244 aa0.4□□□□□ -2.35
PSMA4-221ENST00000560842 SLC35B4Q969S0 331 aa0.4□□□□□ -2.35
PSMA4-221ENST00000560842 A0A0D9SG52 128 aa0.39□□□□□ -2.35
PSMA4-221ENST00000560842 EEF1E1-BLOC1S5C9J1V9 151 aa0.39□□□□□ -2.35
PSMA4-221ENST00000560842 BAALC-AS2P0C853 105 aa0.39□□□□□ -2.35
PSMA4-221ENST00000560842 MIR17HGQ75NE6 70 aa0.39□□□□□ -2.35
PSMA4-221ENST00000560842 TMEM86BQ8N661 226 aa0.39□□□□□ -2.35
PSMA4-221ENST00000560842 TNRC6AQ8NDV7 1962 aaKnown RBP0.38□□□□□ -2.35
PSMA4-221ENST00000560842 AP2S1P53680 142 aaPredicted RBP0.38□□□□□ -2.35
PSMA4-221ENST00000560842 CNBPP62633 177 aaKnown RBP0.38□□□□□ -2.35
PSMA4-221ENST00000560842 HBA1P69905 142 aa0.38□□□□□ -2.35
PSMA4-221ENST00000560842 RHOGP84095 191 aa0.38□□□□□ -2.35
PSMA4-221ENST00000560842 SBSPONQ8IVN8 264 aa0.38□□□□□ -2.35
PSMA4-221ENST00000560842 DRC3Q9H069 523 aa0.38□□□□□ -2.35
PSMA4-221ENST00000560842 FBXL12Q9NXK8 326 aa0.38□□□□□ -2.35
PSMA4-221ENST00000560842 CEP192Q8TEP8 1941 aa0.37□□□□□ -2.35
PSMA4-221ENST00000560842 TRAV1-1A0A0B4J248 108 aa0.37□□□□□ -2.35
PSMA4-221ENST00000560842 DCTN3O75935 186 aa0.37□□□□□ -2.35
PSMA4-221ENST00000560842 SSR2P43308 183 aa0.37□□□□□ -2.35
PSMA4-221ENST00000560842 RHEBQ15382 184 aa0.37□□□□□ -2.35
PSMA4-221ENST00000560842 HIST3H3Q16695 136 aa0.37□□□□□ -2.35
PSMA4-221ENST00000560842 OR4E2Q8NGC2 313 aa0.37□□□□□ -2.35
PSMA4-221ENST00000560842 PTH2Q96A98 100 aa0.37□□□□□ -2.35
PSMA4-221ENST00000560842 NIPSNAP1Q9BPW8 284 aa0.37□□□□□ -2.35
PSMA4-221ENST00000560842 CMTM6Q9NX76 183 aa0.37□□□□□ -2.35
PSMA4-221ENST00000560842 LSM5Q9Y4Y9 91 aaKnown RBP0.37□□□□□ -2.35
PSMA4-221ENST00000560842 ATP6V1DQ9Y5K8 247 aa0.37□□□□□ -2.35
PSMA4-221ENST00000560842 TRAV12-1A0A0B4J245 112 aa0.36□□□□□ -2.35
PSMA4-221ENST00000560842 KCNK1O00180 336 aa0.36□□□□□ -2.35
PSMA4-221ENST00000560842 LYZL6O75951 148 aa0.36□□□□□ -2.35
PSMA4-221ENST00000560842 LPCAT4Q643R3 524 aa0.36□□□□□ -2.35
PSMA4-221ENST00000560842 BPIFA4PQ86YQ2 179 aa0.36□□□□□ -2.35
PSMA4-221ENST00000560842 CLVS1Q8IUQ0 354 aaPredicted RBP0.36□□□□□ -2.35
PSMA4-221ENST00000560842 SIGLECL1Q8N7X8 197 aa0.36□□□□□ -2.35
PSMA4-221ENST00000560842 H1FXQ92522 213 aaKnown RBP0.36□□□□□ -2.35
PSMA4-221ENST00000560842 IMP4Q96G21 291 aaKnown RBP0.36□□□□□ -2.35
PSMA4-221ENST00000560842 AMELYQ99218 206 aa0.36□□□□□ -2.35
PSMA4-221ENST00000560842 LLPHQ9BRT6 129 aaKnown RBP0.36□□□□□ -2.35
PSMA4-221ENST00000560842 ULBP3Q9BZM4 244 aa0.36□□□□□ -2.35
PSMA4-221ENST00000560842 TAS2R4Q9NYW5 299 aa0.36□□□□□ -2.35
PSMA4-221ENST00000560842 E9PCH4 1651 aa0.36□□□□□ -2.35
PSMA4-221ENST00000560842 COL1A1P02452 1464 aaPredicted RBP0.35□□□□□ -2.35
PSMA4-221ENST00000560842 SNAPC4Q5SXM2 1469 aa0.35□□□□□ -2.35
PSMA4-221ENST00000560842 NEO1Q92859 1461 aa0.35□□□□□ -2.35
PSMA4-221ENST00000560842 SBF1O95248 1867 aa0.35□□□□□ -2.35
PSMA4-221ENST00000560842 NUP155O75694 1391 aa0.35□□□□□ -2.35
PSMA4-221ENST00000560842 BUB1B-PAK6H3BSN5 160 aa0.35□□□□□ -2.35
PSMA4-221ENST00000560842 OR2B3O76000 313 aa0.35□□□□□ -2.35
PSMA4-221ENST00000560842 UBL3O95164 117 aa0.35□□□□□ -2.35
PSMA4-221ENST00000560842 TCL1BO95988 128 aa0.35□□□□□ -2.35
PSMA4-221ENST00000560842 HLA-DRB1P01911 266 aa0.35□□□□□ -2.35
PSMA4-221ENST00000560842 HIST1H1TP22492 207 aaPredicted RBP0.35□□□□□ -2.35
PSMA4-221ENST00000560842 TCL1AP56279 114 aa0.35□□□□□ -2.35
PSMA4-221ENST00000560842 SNRPD2P62316 118 aaKnown RBP0.35□□□□□ -2.35
PSMA4-221ENST00000560842 KCNJ8Q15842 424 aa0.35□□□□□ -2.35
PSMA4-221ENST00000560842 DPPA3Q6W0C5 159 aa0.35□□□□□ -2.35
PSMA4-221ENST00000560842 OR51D1Q8NGF3 324 aa0.35□□□□□ -2.35
PSMA4-221ENST00000560842 OR5A1Q8NGJ0 315 aa0.35□□□□□ -2.35
PSMA4-221ENST00000560842 TOMM6Q96B49 74 aa0.35□□□□□ -2.35
PSMA4-221ENST00000560842 OR52E6Q96RD3 313 aa0.35□□□□□ -2.35
PSMA4-221ENST00000560842 PRTFDC1Q9NRG1 225 aa0.35□□□□□ -2.35
PSMA4-221ENST00000560842 TRBV6-8A0A0A6YYG3 113 aa0.34□□□□□ -2.36
PSMA4-221ENST00000560842 DPRXA6NFQ7 191 aa0.34□□□□□ -2.36
PSMA4-221ENST00000560842 IFNA10P01566 189 aa0.34□□□□□ -2.36
PSMA4-221ENST00000560842 OR2F1Q13607 317 aa0.34□□□□□ -2.36
PSMA4-221ENST00000560842 KHDC3LQ587J8 217 aa0.34□□□□□ -2.36
PSMA4-221ENST00000560842 C1orf137Q5JT78 98 aa0.34□□□□□ -2.36
PSMA4-221ENST00000560842 OOSP2Q86WS3 158 aa0.34□□□□□ -2.36
PSMA4-221ENST00000560842 C20orf196Q8IYI0 205 aa0.34□□□□□ -2.36
PSMA4-221ENST00000560842 OR10J5Q8NHC4 309 aa0.34□□□□□ -2.36
PSMA4-221ENST00000560842 SFT2D1Q8WV19 159 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms