RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 IGHV4-30-4P0DP06 118 aa9.83□□□□□ -0.84
CTDSPL2-209ENST00000560620 MFAP4P55083 255 aa9.83□□□□□ -0.84
CTDSPL2-209ENST00000560620 DEFB114Q30KQ6 69 aa9.83□□□□□ -0.84
CTDSPL2-209ENST00000560620 TM4SF20Q53R12 229 aa9.83□□□□□ -0.84
CTDSPL2-209ENST00000560620 TRIQKQ629K1 86 aa9.83□□□□□ -0.84
CTDSPL2-209ENST00000560620 UNQ9165/PRO28630Q6UXU0 137 aa9.83□□□□□ -0.84
CTDSPL2-209ENST00000560620 ADAMTSL5Q6ZMM2 481 aa9.83□□□□□ -0.84
CTDSPL2-209ENST00000560620 UXS1Q8NBZ7 420 aa9.83□□□□□ -0.84
CTDSPL2-209ENST00000560620 LHFPL5Q8TAF8 219 aa9.83□□□□□ -0.84
CTDSPL2-209ENST00000560620 TRIM63Q969Q1 353 aa9.83□□□□□ -0.84
CTDSPL2-209ENST00000560620 TUBA4BQ9H853 241 aa9.83□□□□□ -0.84
CTDSPL2-209ENST00000560620 TECRQ9NZ01 308 aaKnown RBP9.83□□□□□ -0.84
CTDSPL2-209ENST00000560620 PRR13Q9NZ81 148 aa9.83□□□□□ -0.84
CTDSPL2-209ENST00000560620 NDUFA13Q9P0J0 144 aa9.83□□□□□ -0.84
CTDSPL2-209ENST00000560620 CACNG5Q9UF02 275 aa9.83□□□□□ -0.84
CTDSPL2-209ENST00000560620 IGHV3OR16-8A0A075B7F1 116 aa9.82□□□□□ -0.84
CTDSPL2-209ENST00000560620 TMEM213A2RRL7 107 aa9.82□□□□□ -0.84
CTDSPL2-209ENST00000560620 CEBPZOSA8MTT3 80 aa9.82□□□□□ -0.84
CTDSPL2-209ENST00000560620 A8MWP6 167 aa9.82□□□□□ -0.84
CTDSPL2-209ENST00000560620 GNG7O60262 68 aa9.82□□□□□ -0.84
CTDSPL2-209ENST00000560620 YIF1AO95070 293 aa9.82□□□□□ -0.84
CTDSPL2-209ENST00000560620 VAMP1P23763 118 aa9.82□□□□□ -0.84
CTDSPL2-209ENST00000560620 CD81P60033 236 aa9.82□□□□□ -0.84
CTDSPL2-209ENST00000560620 BTNL8Q6UX41 500 aa9.82□□□□□ -0.84
CTDSPL2-209ENST00000560620 Q6ZRM9 215 aa9.82□□□□□ -0.84
CTDSPL2-209ENST00000560620 ZNF114Q8NC26 417 aa9.82□□□□□ -0.84
CTDSPL2-209ENST00000560620 TMEM230Q96A57 120 aa9.82□□□□□ -0.84
CTDSPL2-209ENST00000560620 GPR146Q96CH1 333 aa9.82□□□□□ -0.84
CTDSPL2-209ENST00000560620 CHRDL1Q9BU40 450 aa9.82□□□□□ -0.84
CTDSPL2-209ENST00000560620 HEYLQ9NQ87 328 aaPredicted RBP9.82□□□□□ -0.84
CTDSPL2-209ENST00000560620 LINC00854A0A1B0GVQ3 168 aa9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 I3L2K1 104 aa9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 NDUFA4O00483 81 aa9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 SCAF4O95104 1147 aaKnown RBP9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 SPCS3P61009 180 aa9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 SRPXP78539 464 aa9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 RELQ04864 619 aaPredicted RBP9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 TMEM187Q14656 261 aa9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 RBPMS2Q6ZRY4 209 aaKnown RBP9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 SBSPONQ8IVN8 264 aa9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 LGI3Q8N145 548 aa9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 Q8N1Y9 231 aa9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 DUSP18Q8NEJ0 188 aa9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 MARC2Q969Z3 335 aa9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 WDR89Q96FK6 387 aaPredicted RBP9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 GALNT14Q96FL9 552 aa9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 ATP6V0BQ99437 205 aa9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 SLC25A21Q9BQT8 299 aaPredicted RBP9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 SRRQ9GZT4 340 aa9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 DAZ1Q9NQZ3 744 aaKnown RBP9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 MLXQ9UH92 298 aa9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 TMEM56-RWDD3S4R434 201 aa9.81□□□□□ -0.84
CTDSPL2-209ENST00000560620 CORTO00230 105 aa9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 ZNF207O43670 478 aaKnown RBP9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 SULT1A3P0DMM9 295 aa9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 SULT1A4P0DMN0 295 aa9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 OPRK1P41145 380 aa9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 NPBWR1P48145 328 aa9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 TMEM128Q5BJH2 165 aa9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 LYZL2Q7Z4W2 148 aa9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 TMEM61Q8N0U2 210 aa9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 DEDD2Q8WXF8 326 aa9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 TMEM190Q8WZ59 177 aa9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 IL22RA2Q969J5 263 aa9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 TXN2Q99757 166 aa9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 NEURL2Q9BR09 285 aa9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 ZNF436Q9C0F3 470 aaPredicted RBP9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 HIPK2Q9H2X6 1198 aa9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 ZMAT4Q9H898 229 aa9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 MRPL27Q9P0M9 148 aaKnown RBP9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 U3KQK5 164 aa9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 COL7A1Q02388 2944 aa9.8□□□□□ -0.84
CTDSPL2-209ENST00000560620 A0A0B4J2A0 478 aa9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 PIGBOS1A0A0B4J2F0 54 aa9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 CENPXA8MT69 81 aa9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 F8W735 103 aaPredicted RBP9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 INS-IGF2F8WCM5 200 aa9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 CTSGP08311 255 aa9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 RNASE2P10153 161 aaKnown RBP9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 ADMP35318 185 aa9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 HTR2BP41595 481 aa9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 ELLP55199 621 aaPredicted RBP9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 SUPT4H1P63272 117 aaKnown RBP9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 RBMS2Q15434 407 aaKnown RBP9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 BAK1Q16611 211 aa9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 SLC16A13Q7RTY0 426 aa9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 CENPSQ8N2Z9 138 aa9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 OR52E5Q8NH55 327 aa9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 OR1S1Q8NH92 325 aa9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 CACFD1Q9UGQ2 172 aa9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 SHPKQ9UHJ6 478 aa9.79□□□□□ -0.84
CTDSPL2-209ENST00000560620 ZNF785A8K8V0 405 aa9.78□□□□□ -0.84
CTDSPL2-209ENST00000560620 SCGB2A1O75556 95 aa9.78□□□□□ -0.84
CTDSPL2-209ENST00000560620 CD7P09564 240 aa9.78□□□□□ -0.84
CTDSPL2-209ENST00000560620 CCR6P51684 374 aa9.78□□□□□ -0.84
CTDSPL2-209ENST00000560620 SMCO1Q147U7 214 aa9.78□□□□□ -0.84
CTDSPL2-209ENST00000560620 OR52B4Q8NGK2 314 aa9.78□□□□□ -0.84
CTDSPL2-209ENST00000560620 RPS10-NUDT3A0A1W2PQS6 291 aa9.77□□□□□ -0.85
CTDSPL2-209ENST00000560620 NAP1L6A6NFF2 107 aa9.77□□□□□ -0.85
CTDSPL2-209ENST00000560620 C15orf62A8K5M9 175 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms