RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 SLC25A6P12236 298 aa11.91□□□□□ -0.5
LYSMD2-204ENST00000560491 SPNP16150 400 aa11.91□□□□□ -0.5
LYSMD2-204ENST00000560491 SAMD5Q5TGI4 173 aa11.91□□□□□ -0.5
LYSMD2-204ENST00000560491 OR1L6Q8NGR2 347 aa11.91□□□□□ -0.5
LYSMD2-204ENST00000560491 ZNF502Q8TBZ5 544 aa11.91□□□□□ -0.5
LYSMD2-204ENST00000560491 PINX1Q96BK5 328 aaKnown RBP11.91□□□□□ -0.5
LYSMD2-204ENST00000560491 RCC1LQ96I51 464 aaKnown RBP11.91□□□□□ -0.5
LYSMD2-204ENST00000560491 CXorf58Q96LI9 332 aa11.91□□□□□ -0.5
LYSMD2-204ENST00000560491 HEYLQ9NQ87 328 aaPredicted RBP11.91□□□□□ -0.5
LYSMD2-204ENST00000560491 ZC4H2Q9NQZ6 224 aa11.91□□□□□ -0.5
LYSMD2-204ENST00000560491 CCSO14618 274 aa11.9□□□□□ -0.5
LYSMD2-204ENST00000560491 OVOL1O14753 267 aa11.9□□□□□ -0.5
LYSMD2-204ENST00000560491 IGHV3-48P01763 117 aa11.9□□□□□ -0.5
LYSMD2-204ENST00000560491 ZP3P21754 424 aa11.9□□□□□ -0.5
LYSMD2-204ENST00000560491 GPR183P32249 361 aa11.9□□□□□ -0.5
LYSMD2-204ENST00000560491 BSXQ3C1V8 233 aa11.9□□□□□ -0.5
LYSMD2-204ENST00000560491 PLET1Q6UQ28 207 aa11.9□□□□□ -0.5
LYSMD2-204ENST00000560491 UXS1Q8NBZ7 420 aa11.9□□□□□ -0.5
LYSMD2-204ENST00000560491 VN1R17PQ8TDU5 208 aa11.9□□□□□ -0.5
LYSMD2-204ENST00000560491 SCARB1Q8WTV0 552 aa11.9□□□□□ -0.5
LYSMD2-204ENST00000560491 TRBV7-1A0A0A6YYK4 115 aa11.89□□□□□ -0.51
LYSMD2-204ENST00000560491 INMT-MINDY4F8WBC2 141 aa11.89□□□□□ -0.51
LYSMD2-204ENST00000560491 I3L2K1 104 aa11.89□□□□□ -0.51
LYSMD2-204ENST00000560491 MT-CO2P00403 227 aa11.89□□□□□ -0.51
LYSMD2-204ENST00000560491 IFNA21P01568 189 aa11.89□□□□□ -0.51
LYSMD2-204ENST00000560491 IL5P05113 134 aa11.89□□□□□ -0.51
LYSMD2-204ENST00000560491 ARL3P36405 182 aa11.89□□□□□ -0.51
LYSMD2-204ENST00000560491 RPEL1Q2QD12 228 aa11.89□□□□□ -0.51
LYSMD2-204ENST00000560491 SLC24A4Q8NFF2 622 aa11.89□□□□□ -0.51
LYSMD2-204ENST00000560491 DTD1Q8TEA8 209 aa11.89□□□□□ -0.51
LYSMD2-204ENST00000560491 TMEM170AQ8WVE7 144 aa11.89□□□□□ -0.51
LYSMD2-204ENST00000560491 OR10C1Q96KK4 312 aa11.89□□□□□ -0.51
LYSMD2-204ENST00000560491 MAGT1Q9H0U3 335 aa11.89□□□□□ -0.51
LYSMD2-204ENST00000560491 C21orf62Q9NYP8 219 aa11.89□□□□□ -0.51
LYSMD2-204ENST00000560491 CACFD1Q9UGQ2 172 aa11.89□□□□□ -0.51
LYSMD2-204ENST00000560491 FBN3Q75N90 2809 aa11.89□□□□□ -0.51
LYSMD2-204ENST00000560491 SEC14L6B5MCN3 397 aa11.88□□□□□ -0.51
LYSMD2-204ENST00000560491 F8W735 103 aaPredicted RBP11.88□□□□□ -0.51
LYSMD2-204ENST00000560491 CLEC3BP05452 202 aa11.88□□□□□ -0.51
LYSMD2-204ENST00000560491 IAPPP10997 89 aa11.88□□□□□ -0.51
LYSMD2-204ENST00000560491 HTR2BP41595 481 aa11.88□□□□□ -0.51
LYSMD2-204ENST00000560491 SUB1P53999 127 aaKnown RBP eCLIP11.88□□□□□ -0.51
LYSMD2-204ENST00000560491 SYNJ2BPP57105 145 aa11.88□□□□□ -0.51
LYSMD2-204ENST00000560491 PVRIGQ6DKI7 326 aa11.88□□□□□ -0.51
LYSMD2-204ENST00000560491 C12orf45Q8N5I9 185 aaPredicted RBP11.88□□□□□ -0.51
LYSMD2-204ENST00000560491 UBAC2Q8NBM4 344 aa11.88□□□□□ -0.51
LYSMD2-204ENST00000560491 MARVELD1Q9BSK0 173 aa11.88□□□□□ -0.51
LYSMD2-204ENST00000560491 MCRIP2Q9BUT9 160 aaKnown RBP11.88□□□□□ -0.51
LYSMD2-204ENST00000560491 HIPK2Q9H2X6 1198 aa11.88□□□□□ -0.51
LYSMD2-204ENST00000560491 DNAH3Q8TD57 4116 aa11.88□□□□□ -0.51
LYSMD2-204ENST00000560491 NOTCH3Q9UM47 2321 aa11.87□□□□□ -0.51
LYSMD2-204ENST00000560491 OR2T8A6NH00 312 aa11.87□□□□□ -0.51
LYSMD2-204ENST00000560491 FAM90A26D6RGX4 464 aa11.87□□□□□ -0.51
LYSMD2-204ENST00000560491 GGCTO75223 188 aaKnown RBP11.87□□□□□ -0.51
LYSMD2-204ENST00000560491 OR2C1O95371 312 aa11.87□□□□□ -0.51
LYSMD2-204ENST00000560491 KLF5Q13887 457 aaPredicted RBP11.87□□□□□ -0.51
LYSMD2-204ENST00000560491 Q56UQ5 140 aa11.87□□□□□ -0.51
LYSMD2-204ENST00000560491 FAM209BQ5JX69 171 aa11.87□□□□□ -0.51
LYSMD2-204ENST00000560491 OR4D5Q8NGN0 318 aa11.87□□□□□ -0.51
LYSMD2-204ENST00000560491 FAM25EA8MYX2 175 aa11.86□□□□□ -0.51
LYSMD2-204ENST00000560491 TGOLN2O43493 480 aa11.86□□□□□ -0.51
LYSMD2-204ENST00000560491 NPY1RP25929 384 aa11.86□□□□□ -0.51
LYSMD2-204ENST00000560491 OPRK1P41145 380 aa11.86□□□□□ -0.51
LYSMD2-204ENST00000560491 IAH1Q2TAA2 248 aaPredicted RBP11.86□□□□□ -0.51
LYSMD2-204ENST00000560491 BEAN1Q3B7T3 259 aa11.86□□□□□ -0.51
LYSMD2-204ENST00000560491 C2orf83Q53S99 150 aa11.86□□□□□ -0.51
LYSMD2-204ENST00000560491 ZBTB8BQ8NAP8 495 aaPredicted RBP11.86□□□□□ -0.51
LYSMD2-204ENST00000560491 FNDC4Q9H6D8 234 aaPredicted RBP11.86□□□□□ -0.51
LYSMD2-204ENST00000560491 GPN1Q9HCN4 374 aaPredicted RBP11.86□□□□□ -0.51
LYSMD2-204ENST00000560491 IGHV3-35A0A0C4DH35 117 aa11.85□□□□□ -0.51
LYSMD2-204ENST00000560491 CORTO00230 105 aa11.85□□□□□ -0.51
LYSMD2-204ENST00000560491 WRBO00258 174 aa11.85□□□□□ -0.51
LYSMD2-204ENST00000560491 SYNGR2O43760 224 aa11.85□□□□□ -0.51
LYSMD2-204ENST00000560491 PRAF2O60831 178 aa11.85□□□□□ -0.51
LYSMD2-204ENST00000560491 MED6O75586 246 aa11.85□□□□□ -0.51
LYSMD2-204ENST00000560491 SCGB1D2O95969 90 aa11.85□□□□□ -0.51
LYSMD2-204ENST00000560491 PTTG1O95997 202 aa11.85□□□□□ -0.51
LYSMD2-204ENST00000560491 IFNA10P01566 189 aa11.85□□□□□ -0.51
LYSMD2-204ENST00000560491 NKX2-1P43699 371 aaPredicted RBP11.85□□□□□ -0.51
LYSMD2-204ENST00000560491 MFAP4P55083 255 aa11.85□□□□□ -0.51
LYSMD2-204ENST00000560491 POLR2GP62487 172 aaKnown RBP eCLIP11.85□□□□□ -0.51
LYSMD2-204ENST00000560491 MLANAQ16655 118 aa11.85□□□□□ -0.51
LYSMD2-204ENST00000560491 C9orf66Q5T8R8 295 aa11.85□□□□□ -0.51
LYSMD2-204ENST00000560491 CHRDL1Q9BU40 450 aa11.85□□□□□ -0.51
LYSMD2-204ENST00000560491 PALMDQ9NP74 551 aa11.85□□□□□ -0.51
LYSMD2-204ENST00000560491 MRPL36Q9P0J6 103 aaKnown RBP11.85□□□□□ -0.51
LYSMD2-204ENST00000560491 GSKIPQ9P0R6 139 aa11.85□□□□□ -0.51
LYSMD2-204ENST00000560491 C5orf51A6NDU8 294 aa11.84□□□□□ -0.51
LYSMD2-204ENST00000560491 SSSCA1O60232 199 aa11.84□□□□□ -0.51
LYSMD2-204ENST00000560491 SAP30O75446 220 aa11.84□□□□□ -0.51
LYSMD2-204ENST00000560491 ADMP35318 185 aa11.84□□□□□ -0.51
LYSMD2-204ENST00000560491 ID3Q02535 119 aa11.84□□□□□ -0.51
LYSMD2-204ENST00000560491 KPRPQ5T749 579 aaPredicted RBP11.84□□□□□ -0.51
LYSMD2-204ENST00000560491 ACSM6Q6P461 480 aa11.84□□□□□ -0.51
LYSMD2-204ENST00000560491 OR9G4Q8NGQ1 327 aa11.84□□□□□ -0.51
LYSMD2-204ENST00000560491 BSCL2Q96G97 398 aaPredicted RBP11.84□□□□□ -0.51
LYSMD2-204ENST00000560491 U3KQ87 197 aa11.84□□□□□ -0.51
LYSMD2-204ENST00000560491 NOTCH1P46531 2555 aa11.83□□□□□ -0.52
LYSMD2-204ENST00000560491 SNRPGP15A8MWD9 76 aa11.83□□□□□ -0.52
LYSMD2-204ENST00000560491 H3BP45 60 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms