RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, human

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERC1-208	ENST00000560462	HSD17B11	Q8NBQ5	300 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	OR10H4	Q8NGA5	316 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	CNIH3	Q8TBE1	160 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	EEF1AKMT3	Q96AZ1	226 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	RAB40C	Q96S21	281 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	GABARAPL3	Q9BY60	117 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	VCX2	Q9H322	139 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	XCL2	Q9UBD3	114 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	WARS2	Q9UGM6	360 aa	Known RBP	4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	IGHV3OR16-12	A0A075B7B8	117 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	IGHV3OR16-8	A0A075B7F1	116 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462		A0A087WZ39	114 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	TMEM30CP	A0ZSE6	113 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	METTL15	A6NJ78	407 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	SNURFL	B1AK76	121 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462		H3BTX0	84 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	UBC	P0CG48	685 aa	Known RBP	4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	CT45A6	P0DMU7	189 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	CT45A5	P0DMU8	189 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	CT45A7	P0DMV0	189 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	POLR2I	P36954	125 aa	Known RBP	4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	NUTF2	P61970	127 aa	Known RBP	4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	ZNF85	Q03923	595 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	TP53I3	Q53FA7	332 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	OR10K2	Q6IF99	312 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	SSX9	Q7RTT3	188 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	ERAS	Q7Z444	233 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	CDH26	Q8IXH8	852 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	OR8J1	Q8NGP2	316 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	PP6455	Q8WZ26	134 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	ST6GAL2	Q96JF0	529 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	NEDD4L	Q96PU5	975 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	ZNF436	Q9C0F3	470 aa	Predicted RBP	4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	RHOF	Q9HBH0	211 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	RDH8	Q9NYR8	311 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	GNG8	Q9UK08	70 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	AP4S1	Q9Y587	144 aa		4.23	□□□□□ -1.73
HERC1-208	ENST00000560462	KNCN	A6PVL3	124 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	EI24	O14681	340 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	PSCA	O43653	123 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	CIB2	O75838	187 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	SULT1C4	O75897	302 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	TSHB	P01222	138 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	IGKV1-16	P04430	117 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	HTR1A	P08908	422 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	FGF9	P31371	208 aa	Predicted RBP	4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	GPR183	P32249	361 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	PPT1	P50897	306 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	TMED1	Q13445	227 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	ASAH1	Q13510	395 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	MORN2	Q502X0	79 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	ACTL10	Q5JWF8	245 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	FAM71F2	Q6NXP2	309 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	PLET1	Q6UQ28	207 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	TTC9C	Q8N5M4	171 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	CCDC54	Q8NEL0	328 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	OR2G2	Q8NGZ5	317 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	OR10AC1	Q8NH08	325 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	FCAMR	Q8WWV6	532 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	PYDC1	Q8WXC3	89 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	ADAT3	Q96EY9	351 aa	Predicted RBP	4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	CENPN	Q96H22	339 aa	Predicted RBP	4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	OPALIN	Q96PE5	141 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	PAXX	Q9BUH6	204 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	C20orf24	Q9BUV8	137 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	OR2S2	Q9NQN1	319 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	IMPAD1	Q9NX62	359 aa		4.22	□□□□□ -1.73
HERC1-208	ENST00000560462	TRBV7-1	A0A0A6YYK4	115 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	IGKV1-9	A0A0C4DH69	117 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462		A0A0J9YXV3	536 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	DNASE2	O00115	360 aa	Predicted RBP	4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	ZNF207	O43670	478 aa	Known RBP	4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	ATP5H	O75947	161 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	SERPINA3	P01011	423 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	ALPL	P05186	524 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	ATP5G1	P05496	136 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	FCER2	P06734	321 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	OCM2	P0CE71	109 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	OCM	P0CE72	109 aa	Predicted RBP	4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	DEFB130B	P0DP73	79 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	DEFB130A	P0DP74	79 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	ATP5G3	P48201	142 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	FHIT	P49789	147 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	ATP5I	P56385	69 aa	Predicted RBP	4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	LINC01547	P58512	204 aa	Predicted RBP	4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	NANOS3	P60323	173 aa	Known RBP	4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	KRTAP10-8	P60410	259 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	GNMT	Q14749	295 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	DDI2	Q5TDH0	399 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	TMEM244	Q5VVB8	128 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	UTS2B	Q765I0	119 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	SLC25A42	Q86VD7	318 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	FAM24B	Q8N5W8	94 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	DRAXIN	Q8NBI3	349 aa	Predicted RBP	4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	OR4D10	Q8NGI6	311 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	OR51A4	Q8NGJ6	313 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	OR5D18	Q8NGL1	313 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	OR13C9	Q8NGT0	318 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	GPR148	Q8TDV2	347 aa		4.21	□□□□□ -1.74
HERC1-208	ENST00000560462	SECTM1	Q8WVN6	248 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms