RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ATG12O94817 140 aa8.76□□□□□ -1.01
RABGGTA-216ENST00000560243 MT-CO2P00403 227 aa8.76□□□□□ -1.01
RABGGTA-216ENST00000560243 CTSGP08311 255 aa8.76□□□□□ -1.01
RABGGTA-216ENST00000560243 CD81P60033 236 aa8.76□□□□□ -1.01
RABGGTA-216ENST00000560243 Q56UQ5 140 aa8.76□□□□□ -1.01
RABGGTA-216ENST00000560243 TMEM268Q5VZI3 342 aa8.76□□□□□ -1.01
RABGGTA-216ENST00000560243 BTNL8Q6UX41 500 aa8.76□□□□□ -1.01
RABGGTA-216ENST00000560243 GTSCR1Q86UQ5 136 aa8.76□□□□□ -1.01
RABGGTA-216ENST00000560243 SLC35G3Q8N808 338 aa8.76□□□□□ -1.01
RABGGTA-216ENST00000560243 RNASE11Q8TAA1 199 aaKnown RBP8.76□□□□□ -1.01
RABGGTA-216ENST00000560243 TMEM190Q8WZ59 177 aa8.76□□□□□ -1.01
RABGGTA-216ENST00000560243 RBPMSQ93062 196 aaKnown RBP8.76□□□□□ -1.01
RABGGTA-216ENST00000560243 PINX1Q96BK5 328 aaKnown RBP8.76□□□□□ -1.01
RABGGTA-216ENST00000560243 GPR146Q96CH1 333 aa8.76□□□□□ -1.01
RABGGTA-216ENST00000560243 WWC2-AS2Q96NR7 200 aa8.76□□□□□ -1.01
RABGGTA-216ENST00000560243 TECRQ9NZ01 308 aaKnown RBP8.76□□□□□ -1.01
RABGGTA-216ENST00000560243 SCP2D1Q9UJQ7 156 aa8.76□□□□□ -1.01
RABGGTA-216ENST00000560243 KMT2CQ8NEZ4 4911 aaKnown RBP8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 A8MZ25 164 aa8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 ZNF701M0R085 212 aaPredicted RBP8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 SCAF4O95104 1147 aaKnown RBP8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 C8orf88P0DMB2 117 aa8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 RNASE2P10153 161 aaKnown RBP8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 AKR1C4P17516 323 aa8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 S100A5P33763 92 aa8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 SUPT4H1P63272 117 aaKnown RBP8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 ERHP84090 104 aaKnown RBP8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 DHODHQ02127 395 aa8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 TMEM187Q14656 261 aa8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 ZNF57Q68EA5 555 aaPredicted RBP8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 SPSB3Q6PJ21 355 aa8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 RCHY1Q96PM5 261 aa8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 NEURL2Q9BR09 285 aa8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 C20orf24Q9BUV8 137 aa8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 CACNG5Q9UF02 275 aa8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 UFC1Q9Y3C8 167 aa8.75□□□□□ -1.01
RABGGTA-216ENST00000560243 INS-IGF2F8WCM5 200 aa8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 NXPH3O95157 252 aa8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 SNCAP37840 140 aa8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 HOXA1P49639 335 aaPredicted RBP8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 MFAP4P55083 255 aa8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 ELLP55199 621 aaPredicted RBP8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 MLANAQ16655 118 aa8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 HAGHQ16775 308 aa8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 AARDQ4LEZ3 155 aa8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 PVRIGQ6DKI7 326 aa8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 DEFB125Q8N687 156 aa8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 ATP6V0BQ99437 205 aa8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 TM2D3Q9BRN9 247 aa8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 PDCD10Q9BUL8 212 aa8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 TUBA4BQ9H853 241 aa8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 PALMDQ9NP74 551 aa8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 MRPL36Q9P0J6 103 aaKnown RBP8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 MRPL27Q9P0M9 148 aaKnown RBP8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 TMEM56-RWDD3S4R434 201 aa8.74□□□□□ -1.01
RABGGTA-216ENST00000560243 RBMY1BA6NDE4 496 aaKnown RBP8.73□□□□□ -1.01
RABGGTA-216ENST00000560243 RBMY1EA6NEQ0 496 aaKnown RBP8.73□□□□□ -1.01
RABGGTA-216ENST00000560243 NDUFA4O00483 81 aa8.73□□□□□ -1.01
RABGGTA-216ENST00000560243 RBMY1DP0C7P1 496 aaKnown RBP8.73□□□□□ -1.01
RABGGTA-216ENST00000560243 FCGR2BP31994 310 aaPredicted RBP8.73□□□□□ -1.01
RABGGTA-216ENST00000560243 LYZL2Q7Z4W2 148 aa8.73□□□□□ -1.01
RABGGTA-216ENST00000560243 TMED4Q7Z7H5 227 aa8.73□□□□□ -1.01
RABGGTA-216ENST00000560243 FAM219AQ8IW50 185 aa8.73□□□□□ -1.01
RABGGTA-216ENST00000560243 TOMM5Q8N4H5 51 aa8.73□□□□□ -1.01
RABGGTA-216ENST00000560243 MARC2Q969Z3 335 aa8.73□□□□□ -1.01
RABGGTA-216ENST00000560243 GALNT14Q96FL9 552 aa8.73□□□□□ -1.01
RABGGTA-216ENST00000560243 SRRQ9GZT4 340 aa8.73□□□□□ -1.01
RABGGTA-216ENST00000560243 FNDC4Q9H6D8 234 aaPredicted RBP8.73□□□□□ -1.01
RABGGTA-216ENST00000560243 DAZ1Q9NQZ3 744 aaKnown RBP8.73□□□□□ -1.01
RABGGTA-216ENST00000560243 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.73□□□□□ -1.01
RABGGTA-216ENST00000560243 IGHV3-49A0A0A0MS15 119 aa8.72□□□□□ -1.01
RABGGTA-216ENST00000560243 OR11H12B2RN74 326 aa8.72□□□□□ -1.01
RABGGTA-216ENST00000560243 NUPL2O15504 423 aaKnown RBP8.72□□□□□ -1.01
RABGGTA-216ENST00000560243 FAUP35544 74 aaKnown RBP8.72□□□□□ -1.01
RABGGTA-216ENST00000560243 AP3S2P59780 193 aa8.72□□□□□ -1.01
RABGGTA-216ENST00000560243 SPCS3P61009 180 aa8.72□□□□□ -1.01
RABGGTA-216ENST00000560243 BSXQ3C1V8 233 aa8.72□□□□□ -1.01
RABGGTA-216ENST00000560243 LINC00322Q6ZN03 302 aaPredicted RBP8.72□□□□□ -1.01
RABGGTA-216ENST00000560243 TMEM170AQ8WVE7 144 aa8.72□□□□□ -1.01
RABGGTA-216ENST00000560243 SCGB3A2Q96PL1 93 aa8.72□□□□□ -1.01
RABGGTA-216ENST00000560243 TXN2Q99757 166 aa8.72□□□□□ -1.01
RABGGTA-216ENST00000560243 ENY2Q9NPA8 101 aa8.72□□□□□ -1.01
RABGGTA-216ENST00000560243 KCNIP3Q9Y2W7 256 aa8.72□□□□□ -1.01
RABGGTA-216ENST00000560243 K7EMT4 169 aa8.71□□□□□ -1.02
RABGGTA-216ENST00000560243 GNG7O60262 68 aa8.71□□□□□ -1.02
RABGGTA-216ENST00000560243 YIF1AO95070 293 aa8.71□□□□□ -1.02
RABGGTA-216ENST00000560243 BAK1Q16611 211 aa8.71□□□□□ -1.02
RABGGTA-216ENST00000560243 NMSQ5H8A3 153 aa8.71□□□□□ -1.02
RABGGTA-216ENST00000560243 SPANXN2Q5MJ10 180 aa8.71□□□□□ -1.02
RABGGTA-216ENST00000560243 RBPMS2Q6ZRY4 209 aaKnown RBP8.71□□□□□ -1.02
RABGGTA-216ENST00000560243 OR52B4Q8NGK2 314 aa8.71□□□□□ -1.02
RABGGTA-216ENST00000560243 OR52E5Q8NH55 327 aa8.71□□□□□ -1.02
RABGGTA-216ENST00000560243 IL22RA2Q969J5 263 aa8.71□□□□□ -1.02
RABGGTA-216ENST00000560243 SDHCQ99643 169 aaPredicted RBP8.71□□□□□ -1.02
RABGGTA-216ENST00000560243 ZMAT4Q9H898 229 aa8.71□□□□□ -1.02
RABGGTA-216ENST00000560243 SRD5A3Q9H8P0 318 aa8.71□□□□□ -1.02
RABGGTA-216ENST00000560243 RETNQ9HD89 108 aa8.71□□□□□ -1.02
RABGGTA-216ENST00000560243 HEYLQ9NQ87 328 aaPredicted RBP8.71□□□□□ -1.02
RABGGTA-216ENST00000560243 GAR1Q9NY12 217 aaKnown RBP8.71□□□□□ -1.02
RABGGTA-216ENST00000560243 SMPXQ9UHP9 88 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms