RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 GSG1LQ6UXU4 331 aa9.33□□□□□ -0.92
RABGGTA-215ENST00000560207 SLC24A4Q8NFF2 622 aa9.33□□□□□ -0.92
RABGGTA-215ENST00000560207 RAX2Q96IS3 184 aa9.33□□□□□ -0.92
RABGGTA-215ENST00000560207 GNB4Q9HAV0 340 aa9.33□□□□□ -0.92
RABGGTA-215ENST00000560207 PRR13Q9NZ81 148 aa9.33□□□□□ -0.92
RABGGTA-215ENST00000560207 GGCTO75223 188 aaKnown RBP9.32□□□□□ -0.92
RABGGTA-215ENST00000560207 ADAP1O75689 374 aa9.32□□□□□ -0.92
RABGGTA-215ENST00000560207 TSPAN15O95858 294 aa9.32□□□□□ -0.92
RABGGTA-215ENST00000560207 IFNA10P01566 189 aa9.32□□□□□ -0.92
RABGGTA-215ENST00000560207 SLC25A4P12235 298 aa9.32□□□□□ -0.92
RABGGTA-215ENST00000560207 NPBWR1P48145 328 aa9.32□□□□□ -0.92
RABGGTA-215ENST00000560207 INSL3P51460 131 aa9.32□□□□□ -0.92
RABGGTA-215ENST00000560207 MFAP4P55083 255 aa9.32□□□□□ -0.92
RABGGTA-215ENST00000560207 TAS2R30P59541 319 aa9.32□□□□□ -0.92
RABGGTA-215ENST00000560207 UXS1Q8NBZ7 420 aa9.32□□□□□ -0.92
RABGGTA-215ENST00000560207 OR52B4Q8NGK2 314 aa9.32□□□□□ -0.92
RABGGTA-215ENST00000560207 BSCL2Q96G97 398 aaPredicted RBP9.32□□□□□ -0.92
RABGGTA-215ENST00000560207 C2orf50Q96LR7 162 aa9.32□□□□□ -0.92
RABGGTA-215ENST00000560207 RAB40CQ96S21 281 aa9.32□□□□□ -0.92
RABGGTA-215ENST00000560207 SEC22CQ9BRL7 303 aa9.32□□□□□ -0.92
RABGGTA-215ENST00000560207 RBKSQ9H477 322 aa9.32□□□□□ -0.92
RABGGTA-215ENST00000560207 C21orf62Q9NYP8 219 aa9.32□□□□□ -0.92
RABGGTA-215ENST00000560207 TRAV30A0A087WSZ9 112 aa9.31□□□□□ -0.92
RABGGTA-215ENST00000560207 C7orf66A4D0T2 115 aa9.31□□□□□ -0.92
RABGGTA-215ENST00000560207 C5orf51A6NDU8 294 aa9.31□□□□□ -0.92
RABGGTA-215ENST00000560207 NDUFB8O95169 186 aa9.31□□□□□ -0.92
RABGGTA-215ENST00000560207 IGHV3-11P01762 117 aa9.31□□□□□ -0.92
RABGGTA-215ENST00000560207 PRH1P02810 166 aa9.31□□□□□ -0.92
RABGGTA-215ENST00000560207 RNASE2P10153 161 aaKnown RBP9.31□□□□□ -0.92
RABGGTA-215ENST00000560207 PVALBP20472 110 aaPredicted RBP9.31□□□□□ -0.92
RABGGTA-215ENST00000560207 NPY1RP25929 384 aa9.31□□□□□ -0.92
RABGGTA-215ENST00000560207 RPEL1Q2QD12 228 aa9.31□□□□□ -0.92
RABGGTA-215ENST00000560207 FAM106AQ4KMX7 169 aa9.31□□□□□ -0.92
RABGGTA-215ENST00000560207 LINC00482Q8N8I6 264 aa9.31□□□□□ -0.92
RABGGTA-215ENST00000560207 ZBTB8BQ8NAP8 495 aaPredicted RBP9.31□□□□□ -0.92
RABGGTA-215ENST00000560207 OR4D5Q8NGN0 318 aa9.31□□□□□ -0.92
RABGGTA-215ENST00000560207 ZNF502Q8TBZ5 544 aa9.31□□□□□ -0.92
RABGGTA-215ENST00000560207 ELOVL1Q9BW60 279 aa9.31□□□□□ -0.92
RABGGTA-215ENST00000560207 PEMTQ9UBM1 199 aa9.31□□□□□ -0.92
RABGGTA-215ENST00000560207 SSNA1O43805 119 aa9.3□□□□□ -0.92
RABGGTA-215ENST00000560207 ARL3P36405 182 aa9.3□□□□□ -0.92
RABGGTA-215ENST00000560207 GPX4P36969 197 aaPredicted RBP9.3□□□□□ -0.92
RABGGTA-215ENST00000560207 ETV3LQ6ZN32 361 aa9.3□□□□□ -0.92
RABGGTA-215ENST00000560207 GPHB5Q86YW7 130 aa9.3□□□□□ -0.92
RABGGTA-215ENST00000560207 SCARB1Q8WTV0 552 aa9.3□□□□□ -0.92
RABGGTA-215ENST00000560207 ASB13Q8WXK3 278 aa9.3□□□□□ -0.92
RABGGTA-215ENST00000560207 CACNG8Q8WXS5 425 aa9.3□□□□□ -0.92
RABGGTA-215ENST00000560207 DCUN1D4Q92564 292 aa9.3□□□□□ -0.92
RABGGTA-215ENST00000560207 MISP3Q96FF7 219 aa9.3□□□□□ -0.92
RABGGTA-215ENST00000560207 SMIM8Q96KF7 97 aa9.3□□□□□ -0.92
RABGGTA-215ENST00000560207 OR5B12Q96R08 314 aa9.3□□□□□ -0.92
RABGGTA-215ENST00000560207 ANKRD34BA5PLL1 514 aa9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 FAM25EA8MYX2 175 aa9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 I3L2K1 104 aa9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 K7EIM0 57 aa9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 OVOL1O14753 267 aa9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 NUPL2O15504 423 aaKnown RBP9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 MT-CO2P00403 227 aa9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 RLN2P04090 185 aa9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 CLEC3BP05452 202 aa9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 HOXD3P31249 432 aaPredicted RBP9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 OPRK1P41145 380 aa9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 RELQ04864 619 aaPredicted RBP9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 SPINK9Q5DT21 86 aa9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 C18orf65Q6ZTR6 163 aa9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 C1QL4Q86Z23 238 aa9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 OR10C1Q96KK4 312 aa9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 NMES1Q9C002 83 aa9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 GSKIPQ9P0R6 139 aa9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 STRAPQ9Y3F4 350 aaKnown RBP9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 ANK2Q01484 3957 aa9.29□□□□□ -0.92
RABGGTA-215ENST00000560207 IGHV4OR15-8A0A075B7B6 117 aa9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 A0A087WW49 117 aa9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 LGALS9O00182 355 aa9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 TGOLN2O43493 480 aa9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 GNG7O60262 68 aa9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 TSC22D2O75157 780 aa9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 IFNA4P05014 189 aa9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 PET100P0DJ07 73 aa9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 MFAP2P55001 183 aa9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 ELLP55199 621 aaPredicted RBP9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 KLF5Q13887 457 aaPredicted RBP9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 DEFB136Q30KP8 78 aa9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 Q56UQ5 140 aa9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 C9orf66Q5T8R8 295 aa9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 CLEC19AQ6UXS0 136 aa9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 OR4X1Q8NH49 305 aa9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 PINX1Q96BK5 328 aaKnown RBP9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 CCDC140Q96MF4 163 aa9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 SIGLEC8Q9NYZ4 499 aa9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 DMRT1Q9Y5R6 373 aa9.28□□□□□ -0.92
RABGGTA-215ENST00000560207 MFSD2BA6NFX1 497 aa9.27□□□□□ -0.93
RABGGTA-215ENST00000560207 L7N2F9 121 aa9.27□□□□□ -0.93
RABGGTA-215ENST00000560207 WIPF1O43516 503 aa9.27□□□□□ -0.93
RABGGTA-215ENST00000560207 FABP1P07148 127 aa9.27□□□□□ -0.93
RABGGTA-215ENST00000560207 VAMP2P63027 116 aa9.27□□□□□ -0.93
RABGGTA-215ENST00000560207 OXA1LQ15070 435 aa9.27□□□□□ -0.93
RABGGTA-215ENST00000560207 ACSM6Q6P461 480 aa9.27□□□□□ -0.93
RABGGTA-215ENST00000560207 REC114Q7Z4M0 266 aa9.27□□□□□ -0.93
RABGGTA-215ENST00000560207 TMEM116Q8NCL8 245 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms