RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 F8W735 103 aaPredicted RBP12.88□□□□□ -0.35
RPL28-209ENST00000560055 I3L2K1 104 aa12.88□□□□□ -0.35
RPL28-209ENST00000560055 HOXB5P09067 269 aa12.88□□□□□ -0.35
RPL28-209ENST00000560055 EGFEM1PQ0D2K5 195 aa12.88□□□□□ -0.35
RPL28-209ENST00000560055 RPEL1Q2QD12 228 aa12.88□□□□□ -0.35
RPL28-209ENST00000560055 GGNBP1Q5YKI7 109 aa12.88□□□□□ -0.35
RPL28-209ENST00000560055 CLEC19AQ6UXS0 136 aa12.88□□□□□ -0.35
RPL28-209ENST00000560055 OR52B4Q8NGK2 314 aa12.88□□□□□ -0.35
RPL28-209ENST00000560055 COQ8AQ8NI60 647 aa12.88□□□□□ -0.35
RPL28-209ENST00000560055 SCARB1Q8WTV0 552 aa12.88□□□□□ -0.35
RPL28-209ENST00000560055 MITD1Q8WV92 249 aa12.88□□□□□ -0.35
RPL28-209ENST00000560055 ATP6V0BQ99437 205 aa12.88□□□□□ -0.35
RPL28-209ENST00000560055 ENY2Q9NPA8 101 aa12.88□□□□□ -0.35
RPL28-209ENST00000560055 NXPH3O95157 252 aa12.87□□□□□ -0.35
RPL28-209ENST00000560055 CLEC3BP05452 202 aa12.87□□□□□ -0.35
RPL28-209ENST00000560055 H2AFB2P0C5Z0 115 aa12.87□□□□□ -0.35
RPL28-209ENST00000560055 SNCAP37840 140 aa12.87□□□□□ -0.35
RPL28-209ENST00000560055 C9orf66Q5T8R8 295 aa12.87□□□□□ -0.35
RPL28-209ENST00000560055 ACSM6Q6P461 480 aa12.87□□□□□ -0.35
RPL28-209ENST00000560055 DUSP18Q8NEJ0 188 aa12.87□□□□□ -0.35
RPL28-209ENST00000560055 IGHV3-21A0A0B4J1V1 117 aa12.86□□□□□ -0.35
RPL28-209ENST00000560055 CEBPZOSA8MTT3 80 aa12.86□□□□□ -0.35
RPL28-209ENST00000560055 GGCTO75223 188 aaKnown RBP12.86□□□□□ -0.35
RPL28-209ENST00000560055 ADAP1O75689 374 aa12.86□□□□□ -0.35
RPL28-209ENST00000560055 FCGR2BP31994 310 aaPredicted RBP12.86□□□□□ -0.35
RPL28-209ENST00000560055 GPR183P32249 361 aa12.86□□□□□ -0.35
RPL28-209ENST00000560055 ARL3P36405 182 aa12.86□□□□□ -0.35
RPL28-209ENST00000560055 SYNJ2BPP57105 145 aa12.86□□□□□ -0.35
RPL28-209ENST00000560055 C11orf87Q6NUJ2 197 aa12.86□□□□□ -0.35
RPL28-209ENST00000560055 IL34Q6ZMJ4 242 aa12.86□□□□□ -0.35
RPL28-209ENST00000560055 NRARPQ7Z6K4 114 aa12.86□□□□□ -0.35
RPL28-209ENST00000560055 OR9G4Q8NGQ1 327 aa12.86□□□□□ -0.35
RPL28-209ENST00000560055 OR1S1Q8NH92 325 aa12.86□□□□□ -0.35
RPL28-209ENST00000560055 ENKURQ8TC29 256 aa12.86□□□□□ -0.35
RPL28-209ENST00000560055 MISP3Q96FF7 219 aa12.86□□□□□ -0.35
RPL28-209ENST00000560055 HEYLQ9NQ87 328 aaPredicted RBP12.86□□□□□ -0.35
RPL28-209ENST00000560055 C21orf62Q9NYP8 219 aa12.86□□□□□ -0.35
RPL28-209ENST00000560055 MPTX1A8MV57 137 aa12.85□□□□□ -0.35
RPL28-209ENST00000560055 FAM90A26D6RGX4 464 aa12.85□□□□□ -0.35
RPL28-209ENST00000560055 MT-CO2P00403 227 aa12.85□□□□□ -0.35
RPL28-209ENST00000560055 HTR2BP41595 481 aa12.85□□□□□ -0.35
RPL28-209ENST00000560055 INSL3P51460 131 aa12.85□□□□□ -0.35
RPL28-209ENST00000560055 SUB1P53999 127 aaKnown RBP eCLIP12.85□□□□□ -0.35
RPL28-209ENST00000560055 KRTAP10-11P60412 298 aa12.85□□□□□ -0.35
RPL28-209ENST00000560055 C2orf83Q53S99 150 aa12.85□□□□□ -0.35
RPL28-209ENST00000560055 GPHB5Q86YW7 130 aa12.85□□□□□ -0.35
RPL28-209ENST00000560055 TMEM170AQ8WVE7 144 aa12.85□□□□□ -0.35
RPL28-209ENST00000560055 RBKSQ9H477 322 aa12.85□□□□□ -0.35
RPL28-209ENST00000560055 CORTO00230 105 aa12.84□□□□□ -0.35
RPL28-209ENST00000560055 TGOLN2O43493 480 aa12.84□□□□□ -0.35
RPL28-209ENST00000560055 OR2C1O95371 312 aa12.84□□□□□ -0.35
RPL28-209ENST00000560055 DEFA1P59665 94 aa12.84□□□□□ -0.35
RPL28-209ENST00000560055 DEFA3P59666 94 aa12.84□□□□□ -0.35
RPL28-209ENST00000560055 SLC24A4Q8NFF2 622 aa12.84□□□□□ -0.35
RPL28-209ENST00000560055 DTD1Q8TEA8 209 aa12.84□□□□□ -0.35
RPL28-209ENST00000560055 ZNF431Q8TF32 576 aaPredicted RBP12.84□□□□□ -0.35
RPL28-209ENST00000560055 BSCL2Q96G97 398 aaPredicted RBP12.84□□□□□ -0.35
RPL28-209ENST00000560055 SEC22CQ9BRL7 303 aa12.84□□□□□ -0.35
RPL28-209ENST00000560055 OR2T8A6NH00 312 aa12.83□□□□□ -0.36
RPL28-209ENST00000560055 LGALS9O00182 355 aa12.83□□□□□ -0.36
RPL28-209ENST00000560055 IL5P05113 134 aa12.83□□□□□ -0.36
RPL28-209ENST00000560055 TATDN3Q17R31 274 aa12.83□□□□□ -0.36
RPL28-209ENST00000560055 SPSB3Q6PJ21 355 aa12.83□□□□□ -0.36
RPL28-209ENST00000560055 REC114Q7Z4M0 266 aa12.83□□□□□ -0.36
RPL28-209ENST00000560055 PINX1Q96BK5 328 aaKnown RBP12.83□□□□□ -0.36
RPL28-209ENST00000560055 TXN2Q99757 166 aa12.83□□□□□ -0.36
RPL28-209ENST00000560055 HIPK2Q9H2X6 1198 aa12.83□□□□□ -0.36
RPL28-209ENST00000560055 FNDC4Q9H6D8 234 aaPredicted RBP12.83□□□□□ -0.36
RPL28-209ENST00000560055 ZC4H2Q9NQZ6 224 aa12.83□□□□□ -0.36
RPL28-209ENST00000560055 SIGLEC8Q9NYZ4 499 aa12.83□□□□□ -0.36
RPL28-209ENST00000560055 U3KQ87 197 aa12.83□□□□□ -0.36
RPL28-209ENST00000560055 SAP30O75446 220 aa12.82□□□□□ -0.36
RPL28-209ENST00000560055 IFNA21P01568 189 aa12.82□□□□□ -0.36
RPL28-209ENST00000560055 NPY1RP25929 384 aa12.82□□□□□ -0.36
RPL28-209ENST00000560055 ADMP35318 185 aa12.82□□□□□ -0.36
RPL28-209ENST00000560055 MFAP4P55083 255 aa12.82□□□□□ -0.36
RPL28-209ENST00000560055 PLET1Q6UQ28 207 aa12.82□□□□□ -0.36
RPL28-209ENST00000560055 OR4D5Q8NGN0 318 aa12.82□□□□□ -0.36
RPL28-209ENST00000560055 ZNF414Q96IQ9 312 aa12.82□□□□□ -0.36
RPL28-209ENST00000560055 MARVELD1Q9BSK0 173 aa12.82□□□□□ -0.36
RPL28-209ENST00000560055 CHRDL1Q9BU40 450 aa12.82□□□□□ -0.36
RPL28-209ENST00000560055 ELOVL1Q9BW60 279 aa12.82□□□□□ -0.36
RPL28-209ENST00000560055 ZNF436Q9C0F3 470 aaPredicted RBP12.82□□□□□ -0.36
RPL28-209ENST00000560055 GAR1Q9NY12 217 aaKnown RBP12.82□□□□□ -0.36
RPL28-209ENST00000560055 IGHV3-48P01763 117 aa12.81□□□□□ -0.36
RPL28-209ENST00000560055 CSN3P07498 182 aa12.81□□□□□ -0.36
RPL28-209ENST00000560055 CTSGP08311 255 aa12.81□□□□□ -0.36
RPL28-209ENST00000560055 ID3Q02535 119 aa12.81□□□□□ -0.36
RPL28-209ENST00000560055 Q56UQ5 140 aa12.81□□□□□ -0.36
RPL28-209ENST00000560055 RNASEH2CQ8TDP1 164 aaKnown RBP12.81□□□□□ -0.36
RPL28-209ENST00000560055 OR10C1Q96KK4 312 aa12.81□□□□□ -0.36
RPL28-209ENST00000560055 AURKAIP1Q9NWT8 199 aaPredicted RBP12.81□□□□□ -0.36
RPL28-209ENST00000560055 PEMTQ9UBM1 199 aa12.81□□□□□ -0.36
RPL28-209ENST00000560055 A8MWP6 167 aa12.8□□□□□ -0.36
RPL28-209ENST00000560055 MED6O75586 246 aa12.8□□□□□ -0.36
RPL28-209ENST00000560055 PRB2P02812 416 aaPredicted RBP12.8□□□□□ -0.36
RPL28-209ENST00000560055 OPRK1P41145 380 aa12.8□□□□□ -0.36
RPL28-209ENST00000560055 ATP5IP56385 69 aaPredicted RBP12.8□□□□□ -0.36
RPL28-209ENST00000560055 MLANAQ16655 118 aa12.8□□□□□ -0.36
RPL28-209ENST00000560055 FAM106AQ4KMX7 169 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms