RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 FBXL15Q9H469 300 aa8.84□□□□□ -1
CARMIL3-202ENST00000559694 DNAJC4Q9NNZ3 241 aa8.84□□□□□ -1
CARMIL3-202ENST00000559694 KLF2Q9Y5W3 355 aaPredicted RBP8.84□□□□□ -1
CARMIL3-202ENST00000559694 TRAV40A0A0B4J280 105 aa8.83□□□□□ -1
CARMIL3-202ENST00000559694 SERTM2A0A1B0GWG4 89 aa8.83□□□□□ -1
CARMIL3-202ENST00000559694 BMPR1BO00238 502 aa8.83□□□□□ -1
CARMIL3-202ENST00000559694 CGAP01215 116 aa8.83□□□□□ -1
CARMIL3-202ENST00000559694 ADORA2A-AS1P86434 159 aa8.83□□□□□ -1
CARMIL3-202ENST00000559694 KIAA1644Q3SXP7 199 aa8.83□□□□□ -1
CARMIL3-202ENST00000559694 Q6ZR03 302 aa8.83□□□□□ -1
CARMIL3-202ENST00000559694 TMEM133Q9H2Q1 129 aa8.83□□□□□ -1
CARMIL3-202ENST00000559694 LDLRAD4O15165 306 aa8.83□□□□□ -1
CARMIL3-202ENST00000559694 IGKV1D-33P01593 117 aa8.83□□□□□ -1
CARMIL3-202ENST00000559694 IGKV1-33P01594 117 aa8.83□□□□□ -1
CARMIL3-202ENST00000559694 LYPD2Q6UXB3 125 aa8.83□□□□□ -1
CARMIL3-202ENST00000559694 OR8I2Q8N0Y5 310 aa8.83□□□□□ -1
CARMIL3-202ENST00000559694 ZNF418Q8TF45 676 aaPredicted RBP8.83□□□□□ -1
CARMIL3-202ENST00000559694 TMEM191AQ9H0A3 160 aa8.83□□□□□ -1
CARMIL3-202ENST00000559694 TIMM9Q9Y5J7 89 aa8.83□□□□□ -1
CARMIL3-202ENST00000559694 B4DSR2 109 aa8.83□□□□□ -1
CARMIL3-202ENST00000559694 CXorf1O96002 111 aa8.83□□□□□ -1
CARMIL3-202ENST00000559694 AMBPP02760 352 aa8.83□□□□□ -1
CARMIL3-202ENST00000559694 HIVEP3Q5T1R4 2406 aa8.82□□□□□ -1
CARMIL3-202ENST00000559694 IGKV1D-8A0A087WSZ0 117 aa8.82□□□□□ -1
CARMIL3-202ENST00000559694 CBLN1P23435 193 aa8.82□□□□□ -1
CARMIL3-202ENST00000559694 CD1BP29016 333 aa8.82□□□□□ -1
CARMIL3-202ENST00000559694 HSPE1P61604 102 aaKnown RBP8.82□□□□□ -1
CARMIL3-202ENST00000559694 NUTF2P61970 127 aaKnown RBP8.82□□□□□ -1
CARMIL3-202ENST00000559694 FXYD3Q14802 87 aa8.82□□□□□ -1
CARMIL3-202ENST00000559694 CENPVQ7Z7K6 275 aaPredicted RBP8.82□□□□□ -1
CARMIL3-202ENST00000559694 RNF223E7ERA6 249 aa8.82□□□□□ -1
CARMIL3-202ENST00000559694 APCSP02743 223 aa8.82□□□□□ -1
CARMIL3-202ENST00000559694 RPL24P83731 157 aaKnown RBP8.82□□□□□ -1
CARMIL3-202ENST00000559694 FA2HQ7L5A8 372 aa8.82□□□□□ -1
CARMIL3-202ENST00000559694 ATOH7Q8N100 152 aa8.82□□□□□ -1
CARMIL3-202ENST00000559694 TMEM167BQ9NRX6 74 aa8.82□□□□□ -1
CARMIL3-202ENST00000559694 CSN3P07498 182 aa8.82□□□□□ -1
CARMIL3-202ENST00000559694 MORN2Q502X0 79 aa8.82□□□□□ -1
CARMIL3-202ENST00000559694 OR4A47Q6IF82 309 aa8.82□□□□□ -1
CARMIL3-202ENST00000559694 PSMG3Q9BT73 122 aaPredicted RBP8.82□□□□□ -1
CARMIL3-202ENST00000559694 MRPL20Q9BYC9 149 aaKnown RBP8.82□□□□□ -1
CARMIL3-202ENST00000559694 RPUSD1Q9UJJ7 312 aaKnown RBP8.82□□□□□ -1
CARMIL3-202ENST00000559694 PCNX3Q9H6A9 2034 aa8.82□□□□□ -1
CARMIL3-202ENST00000559694 C17orf98A8MV24 154 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 NDUFS7O75251 213 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 REG1AP05451 166 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 BMI1P35226 326 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 TMEM200BQ69YZ2 307 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 RTN4RL2Q86UN3 420 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 LHFPL1Q86WI0 220 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 OR1B1Q8NGR6 318 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 RFNGQ9Y644 331 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 IGKV1D-17A0A075B6S4 117 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 CT45A10P0DMU9 189 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 DMRTC2Q8IXT2 367 aaPredicted RBP8.81□□□□□ -1
CARMIL3-202ENST00000559694 GRAMD2BQ96HH9 432 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 IGKV1D-13A0A0B4J2D9 117 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 IGKV1-13P0DP09 117 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 MFAP2P55001 183 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 HOXA4Q00056 320 aaPredicted RBP8.81□□□□□ -1
CARMIL3-202ENST00000559694 C3orf36Q3SXR2 165 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 ITLN2Q8WWU7 325 aaPredicted RBP8.81□□□□□ -1
CARMIL3-202ENST00000559694 HS3ST6Q96QI5 342 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 C2orf88Q9BSF0 95 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 ZNF581Q9P0T4 197 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 YPEL1O60688 119 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 MT-ND6P03923 174 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 LOXL3P58215 753 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 UBE2L3P68036 154 aaKnown RBP8.81□□□□□ -1
CARMIL3-202ENST00000559694 YPEL2Q96QA6 119 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 TCF19Q9Y242 345 aa8.81□□□□□ -1
CARMIL3-202ENST00000559694 NCOA6Q14686 2063 aaPredicted RBP8.81□□□□□ -1
CARMIL3-202ENST00000559694 LRRK2Q5S007 2527 aa8.8□□□□□ -1
CARMIL3-202ENST00000559694 IGHV3-48P01763 117 aa8.8□□□□□ -1
CARMIL3-202ENST00000559694 RPL23P62829 140 aaKnown RBP8.8□□□□□ -1
CARMIL3-202ENST00000559694 C5orf24Q7Z6I8 188 aa8.8□□□□□ -1
CARMIL3-202ENST00000559694 OR2D3Q8NGH3 330 aa8.8□□□□□ -1
CARMIL3-202ENST00000559694 IMMP2LQ96T52 175 aa8.8□□□□□ -1
CARMIL3-202ENST00000559694 QTRT1Q9BXR0 403 aaKnown RBP8.8□□□□□ -1
CARMIL3-202ENST00000559694 TECRQ9NZ01 308 aaKnown RBP8.8□□□□□ -1
CARMIL3-202ENST00000559694 YTHDF2Q9Y5A9 579 aaKnown RBP8.8□□□□□ -1
CARMIL3-202ENST00000559694 YLPM1P49750 1951 aaKnown RBP8.8□□□□□ -1
CARMIL3-202ENST00000559694 TRBV24-1A0A075B6N3 115 aa8.8□□□□□ -1
CARMIL3-202ENST00000559694 OR5AL1P0C617 328 aa8.8□□□□□ -1
CARMIL3-202ENST00000559694 Q5PR19 223 aa8.8□□□□□ -1
CARMIL3-202ENST00000559694 C10orf91Q5T1B1 145 aa8.8□□□□□ -1
CARMIL3-202ENST00000559694 ZNF788Q6ZQV5 615 aa8.8□□□□□ -1
CARMIL3-202ENST00000559694 OR4F17Q8NGA8 305 aa8.8□□□□□ -1
CARMIL3-202ENST00000559694 PRSS3P2Q8NHM4 247 aa8.8□□□□□ -1
CARMIL3-202ENST00000559694 TMEM170AQ8WVE7 144 aa8.8□□□□□ -1
CARMIL3-202ENST00000559694 PRUNE2Q8WUY3 3088 aa8.8□□□□□ -1
CARMIL3-202ENST00000559694 SLC25A5P05141 298 aaKnown RBP8.8□□□□□ -1
CARMIL3-202ENST00000559694 BLNKQ8WV28 456 aa8.8□□□□□ -1
CARMIL3-202ENST00000559694 SFRP2Q96HF1 295 aa8.8□□□□□ -1
CARMIL3-202ENST00000559694 COL4A2P08572 1712 aa8.79□□□□□ -1
CARMIL3-202ENST00000559694 IGHV3-35A0A0C4DH35 117 aa8.79□□□□□ -1
CARMIL3-202ENST00000559694 VENTXO95231 258 aa8.79□□□□□ -1
CARMIL3-202ENST00000559694 IGHV2-5P01817 119 aa8.79□□□□□ -1
CARMIL3-202ENST00000559694 UCP1P25874 307 aa8.79□□□□□ -1
CARMIL3-202ENST00000559694 BRD3OSQ6XYD6 125 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms