RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 CMTM3Q96MX0 182 aa9.59□□□□□ -0.87
TPM1-220ENST00000559556 BCL7BQ9BQE9 202 aa9.59□□□□□ -0.87
TPM1-220ENST00000559556 PCLOQ9Y6V0 5065 aa9.59□□□□□ -0.87
TPM1-220ENST00000559556 RYR1P21817 5038 aa9.59□□□□□ -0.87
TPM1-220ENST00000559556 KIAA1109Q2LD37 5005 aa9.59□□□□□ -0.87
TPM1-220ENST00000559556 TRAV14DV4A0A0A6YYC5 116 aa9.58□□□□□ -0.88
TPM1-220ENST00000559556 PMP2P02689 132 aa9.58□□□□□ -0.88
TPM1-220ENST00000559556 TAS2R20P59543 309 aa9.58□□□□□ -0.88
TPM1-220ENST00000559556 PRCDQ00LT1 54 aa9.58□□□□□ -0.88
TPM1-220ENST00000559556 TMEM69Q5SWH9 247 aa9.58□□□□□ -0.88
TPM1-220ENST00000559556 OR6F1Q8NGZ6 308 aa9.58□□□□□ -0.88
TPM1-220ENST00000559556 SLC25A46Q96AG3 418 aa9.58□□□□□ -0.88
TPM1-220ENST00000559556 GINS3Q9BRX5 216 aa9.58□□□□□ -0.88
TPM1-220ENST00000559556 IGKV3-7A0A075B6H7 116 aa9.57□□□□□ -0.88
TPM1-220ENST00000559556 IGHV3OR16-13A0A075B7E8 117 aa9.57□□□□□ -0.88
TPM1-220ENST00000559556 IGHV3-74A0A0B4J1X5 117 aa9.57□□□□□ -0.88
TPM1-220ENST00000559556 GNG7O60262 68 aa9.57□□□□□ -0.88
TPM1-220ENST00000559556 YIF1AO95070 293 aa9.57□□□□□ -0.88
TPM1-220ENST00000559556 MT-CO2P00403 227 aa9.57□□□□□ -0.88
TPM1-220ENST00000559556 CA1P00915 261 aaPredicted RBP9.57□□□□□ -0.88
TPM1-220ENST00000559556 IGKV1-39P01597 117 aa9.57□□□□□ -0.88
TPM1-220ENST00000559556 IGKV1D-39P04432 117 aa9.57□□□□□ -0.88
TPM1-220ENST00000559556 HRH1P35367 487 aa9.57□□□□□ -0.88
TPM1-220ENST00000559556 TMBIM6P55061 237 aa9.57□□□□□ -0.88
TPM1-220ENST00000559556 TCTAP57738 103 aa9.57□□□□□ -0.88
TPM1-220ENST00000559556 PAFAH1B2P68402 229 aa9.57□□□□□ -0.88
TPM1-220ENST00000559556 PHLDA2Q53GA4 152 aa9.57□□□□□ -0.88
TPM1-220ENST00000559556 TCF24Q7RTU0 167 aa9.57□□□□□ -0.88
TPM1-220ENST00000559556 GBGT1Q8N5D6 347 aa9.57□□□□□ -0.88
TPM1-220ENST00000559556 YIPF6Q96EC8 236 aa9.57□□□□□ -0.88
TPM1-220ENST00000559556 VSIRQ9H7M9 311 aa9.57□□□□□ -0.88
TPM1-220ENST00000559556 FBXL17Q9UF56 701 aa9.57□□□□□ -0.88
TPM1-220ENST00000559556 TRAV2A0A0B4J234 112 aa9.56□□□□□ -0.88
TPM1-220ENST00000559556 ZNF701M0R085 212 aaPredicted RBP9.56□□□□□ -0.88
TPM1-220ENST00000559556 DFFBO76075 338 aa9.56□□□□□ -0.88
TPM1-220ENST00000559556 IFNA4P05014 189 aa9.56□□□□□ -0.88
TPM1-220ENST00000559556 EIF4EP06730 217 aaKnown RBP9.56□□□□□ -0.88
TPM1-220ENST00000559556 S100GP29377 79 aa9.56□□□□□ -0.88
TPM1-220ENST00000559556 TGFBR1P36897 503 aa9.56□□□□□ -0.88
TPM1-220ENST00000559556 LPCAT3Q6P1A2 487 aa9.56□□□□□ -0.88
TPM1-220ENST00000559556 TOMM20LQ6UXN7 152 aa9.56□□□□□ -0.88
TPM1-220ENST00000559556 H2BFWTQ7Z2G1 175 aa9.56□□□□□ -0.88
TPM1-220ENST00000559556 TBC1D26Q86UD7 250 aa9.56□□□□□ -0.88
TPM1-220ENST00000559556 LYSMD2Q8IV50 215 aa9.56□□□□□ -0.88
TPM1-220ENST00000559556 SAMD12Q8N8I0 201 aa9.56□□□□□ -0.88
TPM1-220ENST00000559556 OR4A16Q8NH70 328 aa9.56□□□□□ -0.88
TPM1-220ENST00000559556 C2CD4CQ8TF44 421 aa9.56□□□□□ -0.88
TPM1-220ENST00000559556 RAB2BQ8WUD1 216 aa9.56□□□□□ -0.88
TPM1-220ENST00000559556 ST8SIA2Q92186 375 aa9.56□□□□□ -0.88
TPM1-220ENST00000559556 FUNDC2Q9BWH2 189 aa9.56□□□□□ -0.88
TPM1-220ENST00000559556 MS4A6AQ9H2W1 248 aa9.56□□□□□ -0.88
TPM1-220ENST00000559556 ZFAND3Q9H8U3 227 aa9.56□□□□□ -0.88
TPM1-220ENST00000559556 CCDC160A6NGH7 325 aa9.55□□□□□ -0.88
TPM1-220ENST00000559556 A6NHS1 94 aa9.55□□□□□ -0.88
TPM1-220ENST00000559556 ST8SIA3O43173 380 aa9.55□□□□□ -0.88
TPM1-220ENST00000559556 IGHV3-48P01763 117 aa9.55□□□□□ -0.88
TPM1-220ENST00000559556 PRSS3P35030 304 aa9.55□□□□□ -0.88
TPM1-220ENST00000559556 HSPE1P61604 102 aaKnown RBP9.55□□□□□ -0.88
TPM1-220ENST00000559556 PRR20EP86478 221 aa9.55□□□□□ -0.88
TPM1-220ENST00000559556 PRR20CP86479 221 aa9.55□□□□□ -0.88
TPM1-220ENST00000559556 PRR20DP86480 221 aa9.55□□□□□ -0.88
TPM1-220ENST00000559556 PRR20BP86481 221 aa9.55□□□□□ -0.88
TPM1-220ENST00000559556 PRR20AP86496 221 aa9.55□□□□□ -0.88
TPM1-220ENST00000559556 TMEM187Q14656 261 aa9.55□□□□□ -0.88
TPM1-220ENST00000559556 GPR107Q5VW38 600 aa9.55□□□□□ -0.88
TPM1-220ENST00000559556 CLVS1Q8IUQ0 354 aaPredicted RBP9.55□□□□□ -0.88
TPM1-220ENST00000559556 Q8NAQ8 132 aa9.55□□□□□ -0.88
TPM1-220ENST00000559556 GPX8Q8TED1 209 aa9.55□□□□□ -0.88
TPM1-220ENST00000559556 MRGPRFQ96AM1 343 aa9.55□□□□□ -0.88
TPM1-220ENST00000559556 PINX1Q96BK5 328 aaKnown RBP9.55□□□□□ -0.88
TPM1-220ENST00000559556 APOHP02749 345 aaPredicted RBP9.54□□□□□ -0.88
TPM1-220ENST00000559556 HLA-DMAP28067 261 aa9.54□□□□□ -0.88
TPM1-220ENST00000559556 RPS19P39019 145 aaKnown RBP9.54□□□□□ -0.88
TPM1-220ENST00000559556 UCP3P55916 312 aa9.54□□□□□ -0.88
TPM1-220ENST00000559556 ERHP84090 104 aaKnown RBP9.54□□□□□ -0.88
TPM1-220ENST00000559556 ZNF600Q6ZNG1 722 aa9.54□□□□□ -0.88
TPM1-220ENST00000559556 LILRB2Q8N423 598 aa9.54□□□□□ -0.88
TPM1-220ENST00000559556 HRH4Q9H3N8 390 aa9.54□□□□□ -0.88
TPM1-220ENST00000559556 RSL24D1Q9UHA3 163 aaKnown RBP9.54□□□□□ -0.88
TPM1-220ENST00000559556 C11orf94C9JXX5 98 aa9.53□□□□□ -0.88
TPM1-220ENST00000559556 INS-IGF2F8WCM5 200 aa9.53□□□□□ -0.88
TPM1-220ENST00000559556 DNASE2O00115 360 aaPredicted RBP9.53□□□□□ -0.88
TPM1-220ENST00000559556 DEFB4AO15263 64 aa9.53□□□□□ -0.88
TPM1-220ENST00000559556 GABARAPO95166 117 aa9.53□□□□□ -0.88
TPM1-220ENST00000559556 NPBWR1P48145 328 aa9.53□□□□□ -0.88
TPM1-220ENST00000559556 DEFB131AP59861 70 aa9.53□□□□□ -0.88
TPM1-220ENST00000559556 TSPAN5P62079 268 aa9.53□□□□□ -0.88
TPM1-220ENST00000559556 LEMD1Q68G75 181 aa9.53□□□□□ -0.88
TPM1-220ENST00000559556 PVRIGQ6DKI7 326 aa9.53□□□□□ -0.88
TPM1-220ENST00000559556 FAM24BQ8N5W8 94 aa9.53□□□□□ -0.88
TPM1-220ENST00000559556 DUSP18Q8NEJ0 188 aa9.53□□□□□ -0.88
TPM1-220ENST00000559556 TMEM231Q9H6L2 316 aa9.53□□□□□ -0.88
TPM1-220ENST00000559556 SCPEP1Q9HB40 452 aa9.53□□□□□ -0.88
TPM1-220ENST00000559556 APLNQ9ULZ1 77 aa9.53□□□□□ -0.88
TPM1-220ENST00000559556 PUS1Q9Y606 427 aaKnown RBP eCLIP9.53□□□□□ -0.88
TPM1-220ENST00000559556 A0A1B0GU03 582 aa9.52□□□□□ -0.89
TPM1-220ENST00000559556 GIG44P09565 113 aaPredicted RBP9.52□□□□□ -0.89
TPM1-220ENST00000559556 P0C879 139 aa9.52□□□□□ -0.89
TPM1-220ENST00000559556 TMEM41BQ5BJD5 291 aa9.52□□□□□ -0.89
TPM1-220ENST00000559556 TRPT1Q86TN4 253 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms