RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 ETV6P41212 452 aa6.19□□□□□ -1.42
SNX1-207ENST00000559401 INPP1P49441 399 aa6.19□□□□□ -1.42
SNX1-207ENST00000559401 SUB1P53999 127 aaKnown RBP eCLIP6.19□□□□□ -1.42
SNX1-207ENST00000559401 MFAP4P55083 255 aa6.19□□□□□ -1.42
SNX1-207ENST00000559401 AP3S2P59780 193 aa6.19□□□□□ -1.42
SNX1-207ENST00000559401 DHODHQ02127 395 aa6.19□□□□□ -1.42
SNX1-207ENST00000559401 SPANXN2Q5MJ10 180 aa6.19□□□□□ -1.42
SNX1-207ENST00000559401 RBPMS2Q6ZRY4 209 aaKnown RBP6.19□□□□□ -1.42
SNX1-207ENST00000559401 SLC16A13Q7RTY0 426 aa6.19□□□□□ -1.42
SNX1-207ENST00000559401 TMED4Q7Z7H5 227 aa6.19□□□□□ -1.42
SNX1-207ENST00000559401 FAM219AQ8IW50 185 aa6.19□□□□□ -1.42
SNX1-207ENST00000559401 TMEM61Q8N0U2 210 aa6.19□□□□□ -1.42
SNX1-207ENST00000559401 TMEM190Q8WZ59 177 aa6.19□□□□□ -1.42
SNX1-207ENST00000559401 RBPMSQ93062 196 aaKnown RBP6.19□□□□□ -1.42
SNX1-207ENST00000559401 MARC2Q969Z3 335 aa6.19□□□□□ -1.42
SNX1-207ENST00000559401 CHRDL1Q9BU40 450 aa6.19□□□□□ -1.42
SNX1-207ENST00000559401 RBM38Q9H0Z9 239 aaKnown RBP6.19□□□□□ -1.42
SNX1-207ENST00000559401 GAR1Q9NY12 217 aaKnown RBP6.19□□□□□ -1.42
SNX1-207ENST00000559401 PRR13Q9NZ81 148 aa6.19□□□□□ -1.42
SNX1-207ENST00000559401 MLXQ9UH92 298 aa6.19□□□□□ -1.42
SNX1-207ENST00000559401 GPR132Q9UNW8 380 aa6.19□□□□□ -1.42
SNX1-207ENST00000559401 KCNIP3Q9Y2W7 256 aa6.19□□□□□ -1.42
SNX1-207ENST00000559401 COL7A1Q02388 2944 aa6.19□□□□□ -1.42
SNX1-207ENST00000559401 ZNF785A8K8V0 405 aa6.18□□□□□ -1.42
SNX1-207ENST00000559401 NDUFA4O00483 81 aa6.18□□□□□ -1.42
SNX1-207ENST00000559401 NXPH3O95157 252 aa6.18□□□□□ -1.42
SNX1-207ENST00000559401 CDS2O95674 445 aa6.18□□□□□ -1.42
SNX1-207ENST00000559401 P0C879 139 aa6.18□□□□□ -1.42
SNX1-207ENST00000559401 ANXA3P12429 323 aa6.18□□□□□ -1.42
SNX1-207ENST00000559401 ELLP55199 621 aaPredicted RBP6.18□□□□□ -1.42
SNX1-207ENST00000559401 RELQ04864 619 aaPredicted RBP6.18□□□□□ -1.42
SNX1-207ENST00000559401 SELENOHQ8IZQ5 122 aaKnown RBP6.18□□□□□ -1.42
SNX1-207ENST00000559401 ZNF114Q8NC26 417 aa6.18□□□□□ -1.42
SNX1-207ENST00000559401 OR52B4Q8NGK2 314 aa6.18□□□□□ -1.42
SNX1-207ENST00000559401 LHFPL5Q8TAF8 219 aa6.18□□□□□ -1.42
SNX1-207ENST00000559401 GLYATL2Q8WU03 294 aa6.18□□□□□ -1.42
SNX1-207ENST00000559401 SOSTQ9BQB4 213 aa6.18□□□□□ -1.42
SNX1-207ENST00000559401 ZNF436Q9C0F3 470 aaPredicted RBP6.18□□□□□ -1.42
SNX1-207ENST00000559401 WFDC10AQ9H1F0 79 aa6.18□□□□□ -1.42
SNX1-207ENST00000559401 HEYLQ9NQ87 328 aaPredicted RBP6.18□□□□□ -1.42
SNX1-207ENST00000559401 DAZ1Q9NQZ3 744 aaKnown RBP6.18□□□□□ -1.42
SNX1-207ENST00000559401 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.18□□□□□ -1.42
SNX1-207ENST00000559401 MRPL27Q9P0M9 148 aaKnown RBP6.18□□□□□ -1.42
SNX1-207ENST00000559401 CACNG5Q9UF02 275 aa6.18□□□□□ -1.42
SNX1-207ENST00000559401 V9GYH0 126 aa6.18□□□□□ -1.42
SNX1-207ENST00000559401 IGHV3-49A0A0A0MS15 119 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 CEBPZOSA8MTT3 80 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 OR11H12B2RN74 326 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 F8W735 103 aaPredicted RBP6.17□□□□□ -1.42
SNX1-207ENST00000559401 I3L2K1 104 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 ZNF701M0R085 212 aaPredicted RBP6.17□□□□□ -1.42
SNX1-207ENST00000559401 CORTO00230 105 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 VAMP1P23763 118 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 ADMP35318 185 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 OPRK1P41145 380 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 NPBWR1P48145 328 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 SPCS3P61009 180 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 KLF9Q13886 244 aaPredicted RBP6.17□□□□□ -1.42
SNX1-207ENST00000559401 ZNF79Q15937 498 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 ANKRD55Q3KP44 614 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 Q6ZRM9 215 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 DEFB125Q8N687 156 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 DUSP18Q8NEJ0 188 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 TRIM63Q969Q1 353 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 TMEM230Q96A57 120 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 GPR146Q96CH1 333 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 ATP6V0BQ99437 205 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 TXN2Q99757 166 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 SRD5A3Q9H8P0 318 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 C19orf73Q9NVV2 129 aa6.17□□□□□ -1.42
SNX1-207ENST00000559401 A8MZ25 164 aa6.16□□□□□ -1.42
SNX1-207ENST00000559401 SCGB2A1O75556 95 aa6.16□□□□□ -1.42
SNX1-207ENST00000559401 CTSGP08311 255 aa6.16□□□□□ -1.42
SNX1-207ENST00000559401 SULT1A3P0DMM9 295 aa6.16□□□□□ -1.42
SNX1-207ENST00000559401 SULT1A4P0DMN0 295 aa6.16□□□□□ -1.42
SNX1-207ENST00000559401 RNASE2P10153 161 aaKnown RBP6.16□□□□□ -1.42
SNX1-207ENST00000559401 SRPXP78539 464 aa6.16□□□□□ -1.42
SNX1-207ENST00000559401 TMEM187Q14656 261 aa6.16□□□□□ -1.42
SNX1-207ENST00000559401 HAGHQ16775 308 aa6.16□□□□□ -1.42
SNX1-207ENST00000559401 TRIQKQ629K1 86 aa6.16□□□□□ -1.42
SNX1-207ENST00000559401 LAMTOR1Q6IAA8 161 aa6.16□□□□□ -1.42
SNX1-207ENST00000559401 CCDC190Q86UF4 302 aa6.16□□□□□ -1.42
SNX1-207ENST00000559401 LGI3Q8N145 548 aa6.16□□□□□ -1.42
SNX1-207ENST00000559401 SPATA25Q9BR10 227 aa6.16□□□□□ -1.42
SNX1-207ENST00000559401 GINS3Q9BRX5 216 aa6.16□□□□□ -1.42
SNX1-207ENST00000559401 TMEM56-RWDD3S4R434 201 aa6.16□□□□□ -1.42
SNX1-207ENST00000559401 IGKV3-7A0A075B6H7 116 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 IGHV3OR16-13A0A075B7E8 117 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 IGHV3-74A0A0B4J1X5 117 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 TRAV25A0A0B4J276 109 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 LINC00854A0A1B0GVQ3 168 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 RPS10-NUDT3A0A1W2PQS6 291 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 C15orf62A8K5M9 175 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 INS-IGF2F8WCM5 200 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 C8orf88P0DMB2 117 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 HTR2BP41595 481 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 TFPI2P48307 235 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 SUPT4H1P63272 117 aaKnown RBP6.15□□□□□ -1.42
SNX1-207ENST00000559401 ZNF600Q6ZNG1 722 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 LYZL2Q7Z4W2 148 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms