RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 HEYLQ9NQ87 328 aaPredicted RBP13.04□□□□□ -0.32
PSEN1-224ENST00000559361 THYN1Q9P016 225 aa13.04□□□□□ -0.32
PSEN1-224ENST00000559361 F11RQ9Y624 299 aaKnown RBP13.04□□□□□ -0.32
PSEN1-224ENST00000559361 U3KQ87 197 aa13.04□□□□□ -0.32
PSEN1-224ENST00000559361 HUWE1Q7Z6Z7 4374 aaKnown RBP13.04□□□□□ -0.32
PSEN1-224ENST00000559361 CORTO00230 105 aa13.03□□□□□ -0.32
PSEN1-224ENST00000559361 RPP30P78346 268 aaKnown RBP13.03□□□□□ -0.32
PSEN1-224ENST00000559361 ZNF329Q86UD4 541 aa13.03□□□□□ -0.32
PSEN1-224ENST00000559361 RAB40CQ96S21 281 aa13.03□□□□□ -0.32
PSEN1-224ENST00000559361 RBKSQ9H477 322 aa13.03□□□□□ -0.32
PSEN1-224ENST00000559361 FAM223BA6NKX1 122 aa13.02□□□□□ -0.33
PSEN1-224ENST00000559361 SOX15O60248 233 aa13.02□□□□□ -0.33
PSEN1-224ENST00000559361 PET100P0DJ07 73 aa13.02□□□□□ -0.33
PSEN1-224ENST00000559361 APELAP0DMC3 54 aa13.02□□□□□ -0.33
PSEN1-224ENST00000559361 H2BFSP57053 126 aa13.02□□□□□ -0.33
PSEN1-224ENST00000559361 TAS2R30P59541 319 aa13.02□□□□□ -0.33
PSEN1-224ENST00000559361 IL15RAQ13261 267 aa13.02□□□□□ -0.33
PSEN1-224ENST00000559361 BSXQ3C1V8 233 aa13.02□□□□□ -0.33
PSEN1-224ENST00000559361 FAM209BQ5JX69 171 aa13.02□□□□□ -0.33
PSEN1-224ENST00000559361 ETV3LQ6ZN32 361 aa13.02□□□□□ -0.33
PSEN1-224ENST00000559361 FAM223AQ8IWN6 122 aa13.02□□□□□ -0.33
PSEN1-224ENST00000559361 OR5T1Q8NG75 326 aa13.02□□□□□ -0.33
PSEN1-224ENST00000559361 DPF1Q92782 380 aa13.02□□□□□ -0.33
PSEN1-224ENST00000559361 USMG5Q96IX5 58 aa13.02□□□□□ -0.33
PSEN1-224ENST00000559361 TRBV9A0A0B4J1U6 114 aa13.01□□□□□ -0.33
PSEN1-224ENST00000559361 A0A0G2JLM5 398 aa13.01□□□□□ -0.33
PSEN1-224ENST00000559361 SCGB1D2O95969 90 aa13.01□□□□□ -0.33
PSEN1-224ENST00000559361 MBPP02686 304 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-224ENST00000559361 PVALBP20472 110 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-224ENST00000559361 RAB9AP51151 201 aa13.01□□□□□ -0.33
PSEN1-224ENST00000559361 FCN2Q15485 313 aa13.01□□□□□ -0.33
PSEN1-224ENST00000559361 C10orf99Q6UWK7 81 aa13.01□□□□□ -0.33
PSEN1-224ENST00000559361 NECAP1Q8NC96 275 aa13.01□□□□□ -0.33
PSEN1-224ENST00000559361 SLC24A4Q8NFF2 622 aa13.01□□□□□ -0.33
PSEN1-224ENST00000559361 MYOZ3Q8TDC0 251 aa13.01□□□□□ -0.33
PSEN1-224ENST00000559361 ZNF355PQ9NSJ1 428 aa13.01□□□□□ -0.33
PSEN1-224ENST00000559361 IGLV11-55A0A075B6I3 123 aa13□□□□□ -0.33
PSEN1-224ENST00000559361 SCAF4O95104 1147 aaKnown RBP13□□□□□ -0.33
PSEN1-224ENST00000559361 NXPH3O95157 252 aa13□□□□□ -0.33
PSEN1-224ENST00000559361 RLN2P04090 185 aa13□□□□□ -0.33
PSEN1-224ENST00000559361 GIPP09681 153 aaPredicted RBP13□□□□□ -0.33
PSEN1-224ENST00000559361 EXOSC2Q13868 293 aaKnown RBP13□□□□□ -0.33
PSEN1-224ENST00000559361 C2orf83Q53S99 150 aa13□□□□□ -0.33
PSEN1-224ENST00000559361 SPINK9Q5DT21 86 aa13□□□□□ -0.33
PSEN1-224ENST00000559361 PVRIGQ6DKI7 326 aa13□□□□□ -0.33
PSEN1-224ENST00000559361 OR11H7Q8NGC8 314 aa13□□□□□ -0.33
PSEN1-224ENST00000559361 P2RX4Q99571 388 aa13□□□□□ -0.33
PSEN1-224ENST00000559361 LSM4Q9Y4Z0 139 aaKnown RBP13□□□□□ -0.33
PSEN1-224ENST00000559361 SORL1Q92673 2214 aa12.99□□□□□ -0.33
PSEN1-224ENST00000559361 SSSCA1O60232 199 aa12.99□□□□□ -0.33
PSEN1-224ENST00000559361 TRGV3P03979 118 aa12.99□□□□□ -0.33
PSEN1-224ENST00000559361 REG1AP05451 166 aa12.99□□□□□ -0.33
PSEN1-224ENST00000559361 CXCL3P19876 107 aa12.99□□□□□ -0.33
PSEN1-224ENST00000559361 NPY1RP25929 384 aa12.99□□□□□ -0.33
PSEN1-224ENST00000559361 TPPP2P59282 170 aa12.99□□□□□ -0.33
PSEN1-224ENST00000559361 POLR2GP62487 172 aaKnown RBP eCLIP12.99□□□□□ -0.33
PSEN1-224ENST00000559361 FGL1Q08830 312 aa12.99□□□□□ -0.33
PSEN1-224ENST00000559361 RNASEH2CQ8TDP1 164 aaKnown RBP12.99□□□□□ -0.33
PSEN1-224ENST00000559361 SMIM8Q96KF7 97 aa12.99□□□□□ -0.33
PSEN1-224ENST00000559361 CXorf58Q96LI9 332 aa12.99□□□□□ -0.33
PSEN1-224ENST00000559361 UBE2E2Q96LR5 201 aa12.99□□□□□ -0.33
PSEN1-224ENST00000559361 ATP6V0BQ99437 205 aa12.99□□□□□ -0.33
PSEN1-224ENST00000559361 MCRIP2Q9BUT9 160 aaKnown RBP12.99□□□□□ -0.33
PSEN1-224ENST00000559361 ZNF436Q9C0F3 470 aaPredicted RBP12.99□□□□□ -0.33
PSEN1-224ENST00000559361 K7EPK0 472 aa12.98□□□□□ -0.33
PSEN1-224ENST00000559361 L7N2F9 121 aa12.98□□□□□ -0.33
PSEN1-224ENST00000559361 TSC22D2O75157 780 aa12.98□□□□□ -0.33
PSEN1-224ENST00000559361 SIX6O95475 246 aa12.98□□□□□ -0.33
PSEN1-224ENST00000559361 IFNA10P01566 189 aa12.98□□□□□ -0.33
PSEN1-224ENST00000559361 RNASE2P10153 161 aaKnown RBP12.98□□□□□ -0.33
PSEN1-224ENST00000559361 CDX1P47902 265 aaPredicted RBP12.98□□□□□ -0.33
PSEN1-224ENST00000559361 RAP2BP61225 183 aa12.98□□□□□ -0.33
PSEN1-224ENST00000559361 RAB11AP62491 216 aa12.98□□□□□ -0.33
PSEN1-224ENST00000559361 RPL23AP62750 156 aaKnown RBP12.98□□□□□ -0.33
PSEN1-224ENST00000559361 VAMP2P63027 116 aa12.98□□□□□ -0.33
PSEN1-224ENST00000559361 RHOGP84095 191 aa12.98□□□□□ -0.33
PSEN1-224ENST00000559361 PPP1R1CQ8WVI7 109 aa12.98□□□□□ -0.33
PSEN1-224ENST00000559361 FANCD2OSQ96PS1 177 aa12.98□□□□□ -0.33
PSEN1-224ENST00000559361 MAGT1Q9H0U3 335 aa12.98□□□□□ -0.33
PSEN1-224ENST00000559361 ZMAT5Q9UDW3 170 aaKnown RBP12.98□□□□□ -0.33
PSEN1-224ENST00000559361 RCL1Q9Y2P8 373 aaKnown RBP12.98□□□□□ -0.33
PSEN1-224ENST00000559361 TNCP24821 2201 aa12.98□□□□□ -0.33
PSEN1-224ENST00000559361 CSMD3Q7Z407 3707 aa12.97□□□□□ -0.33
PSEN1-224ENST00000559361 DEDDO75618 318 aa12.97□□□□□ -0.33
PSEN1-224ENST00000559361 S100A10P60903 97 aa12.97□□□□□ -0.33
PSEN1-224ENST00000559361 RAB32Q13637 225 aa12.97□□□□□ -0.33
PSEN1-224ENST00000559361 CASC10Q5T4H9 136 aa12.97□□□□□ -0.33
PSEN1-224ENST00000559361 SLC25A24Q6NUK1 477 aa12.97□□□□□ -0.33
PSEN1-224ENST00000559361 VN1R17PQ8TDU5 208 aa12.97□□□□□ -0.33
PSEN1-224ENST00000559361 FBXL7Q9UJT9 491 aa12.97□□□□□ -0.33
PSEN1-224ENST00000559361 STRAPQ9Y3F4 350 aaKnown RBP12.97□□□□□ -0.33
PSEN1-224ENST00000559361 LSM5Q9Y4Y9 91 aaKnown RBP12.97□□□□□ -0.33
PSEN1-224ENST00000559361 RPS10-NUDT3A0A1W2PQS6 291 aa12.96□□□□□ -0.33
PSEN1-224ENST00000559361 E5RGE8 158 aa12.96□□□□□ -0.33
PSEN1-224ENST00000559361 RPLP1P05386 114 aaKnown RBP12.96□□□□□ -0.33
PSEN1-224ENST00000559361 IAPPP10997 89 aa12.96□□□□□ -0.33
PSEN1-224ENST00000559361 ATP5G2Q06055 141 aa12.96□□□□□ -0.33
PSEN1-224ENST00000559361 ETFRF1Q6IPR1 90 aa12.96□□□□□ -0.33
PSEN1-224ENST00000559361 ZNF491Q8N8L2 437 aa12.96□□□□□ -0.33
PSEN1-224ENST00000559361 MS4A10Q96PG2 267 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms