RNA–Protein interactions for RNA: ENST00000559340.1

LDLR-210, Transcript of low density lipoprotein receptor, humanhuman

TSL 5

Gene LDLR, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-210ENST00000559340 ZNF436Q9C0F3 470 aaPredicted RBP7.2□□□□□ -1.26
LDLR-210ENST00000559340 MAGT1Q9H0U3 335 aa7.2□□□□□ -1.26
LDLR-210ENST00000559340 PSENENQ9NZ42 101 aa7.2□□□□□ -1.26
LDLR-210ENST00000559340 TRBV7-1A0A0A6YYK4 115 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 E5RGE8 158 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 K7EPK0 472 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 SSSCA1O60232 199 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 OR2J3O76001 311 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 RPLP1P05386 114 aaKnown RBP7.19□□□□□ -1.26
LDLR-210ENST00000559340 GIPP09681 153 aaPredicted RBP7.19□□□□□ -1.26
LDLR-210ENST00000559340 OR8U8P0C7N1 319 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 IAPPP10997 89 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 BCAP31P51572 246 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 MFAP4P55083 255 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 RAP2BP61225 183 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 IL15RAQ13261 267 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 BSXQ3C1V8 233 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 SPANXN5Q5MJ07 72 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 C10orf99Q6UWK7 81 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 C11orf44Q8N8P7 122 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 OR4F17Q8NGA8 305 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 MYOZ3Q8TDC0 251 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 DPF1Q92782 380 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 FANCD2OSQ96PS1 177 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 OR4F4Q96R69 305 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 TXN2Q99757 166 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 CITED2Q99967 270 aaPredicted RBP7.19□□□□□ -1.26
LDLR-210ENST00000559340 SLC25A31Q9H0C2 315 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 KLK15Q9H2R5 256 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 PAIP2BQ9ULR5 123 aaKnown RBP7.19□□□□□ -1.26
LDLR-210ENST00000559340 RCL1Q9Y2P8 373 aaKnown RBP7.19□□□□□ -1.26
LDLR-210ENST00000559340 CUBNO60494 3623 aa7.19□□□□□ -1.26
LDLR-210ENST00000559340 M0QZ24 198 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 PRH1P02810 166 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 LGALS1P09382 135 aaKnown RBP7.18□□□□□ -1.26
LDLR-210ENST00000559340 SLC25A4P12235 298 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 GPX4P36969 197 aaPredicted RBP7.18□□□□□ -1.26
LDLR-210ENST00000559340 NUP62P37198 522 aaPredicted RBP7.18□□□□□ -1.26
LDLR-210ENST00000559340 OPRK1P41145 380 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 NPBWR1P48145 328 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 H2BFSP57053 126 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 RUNX1Q01196 453 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 RAB32Q13637 225 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 C15orf32Q32M92 178 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 NSUN5P1Q3KNT7 163 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 PVRIGQ6DKI7 326 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 ETV3LQ6ZN32 361 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 KLHL30-AS1Q8NEE0 82 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 OR11H7Q8NGC8 314 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 THAP6Q8TBB0 222 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 PPP1R1CQ8WVI7 109 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 C4orf3Q8WVX3 66 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 CACNG8Q8WXS5 425 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 DCUN1D4Q92564 292 aa7.18□□□□□ -1.26
LDLR-210ENST00000559340 PINX1Q96BK5 328 aaKnown RBP7.18□□□□□ -1.26
LDLR-210ENST00000559340 RANGRFQ9HD47 186 aaPredicted RBP7.18□□□□□ -1.26
LDLR-210ENST00000559340 TRAV30A0A087WSZ9 112 aa7.17□□□□□ -1.26
LDLR-210ENST00000559340 DEDDO75618 318 aa7.17□□□□□ -1.26
LDLR-210ENST00000559340 NDUFB8O95169 186 aa7.17□□□□□ -1.26
LDLR-210ENST00000559340 MPC2O95563 127 aa7.17□□□□□ -1.26
LDLR-210ENST00000559340 MT-CO2P00403 227 aa7.17□□□□□ -1.26
LDLR-210ENST00000559340 HSPB1P04792 205 aaKnown RBP7.17□□□□□ -1.26
LDLR-210ENST00000559340 CXCL3P19876 107 aa7.17□□□□□ -1.26
LDLR-210ENST00000559340 ZP3P21754 424 aa7.17□□□□□ -1.26
LDLR-210ENST00000559340 MYCNOSP40205 109 aa7.17□□□□□ -1.26
LDLR-210ENST00000559340 KRTAP10-3P60369 221 aa7.17□□□□□ -1.26
LDLR-210ENST00000559340 KIAA0141Q14154 515 aaPredicted RBP7.17□□□□□ -1.26
LDLR-210ENST00000559340 TCTEX1D4Q5JR98 221 aa7.17□□□□□ -1.26
LDLR-210ENST00000559340 ZNF343Q6P1L6 599 aa7.17□□□□□ -1.26
LDLR-210ENST00000559340 LCNL1Q6ZST4 164 aa7.17□□□□□ -1.26
LDLR-210ENST00000559340 STX12Q86Y82 276 aa7.17□□□□□ -1.26
LDLR-210ENST00000559340 OR10P1Q8NGE3 313 aa7.17□□□□□ -1.26
LDLR-210ENST00000559340 SLC35E1Q96K37 410 aa7.17□□□□□ -1.26
LDLR-210ENST00000559340 C21orf62Q9NYP8 219 aa7.17□□□□□ -1.26
LDLR-210ENST00000559340 PEF1Q9UBV8 284 aaKnown RBP7.17□□□□□ -1.26
LDLR-210ENST00000559340 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.16□□□□□ -1.26
LDLR-210ENST00000559340 A0A1W2PRX2 142 aa7.16□□□□□ -1.26
LDLR-210ENST00000559340 C15orf62A8K5M9 175 aa7.16□□□□□ -1.26
LDLR-210ENST00000559340 I3L2K1 104 aa7.16□□□□□ -1.26
LDLR-210ENST00000559340 IGHV3-11P01762 117 aa7.16□□□□□ -1.26
LDLR-210ENST00000559340 FCGR2BP31994 310 aaPredicted RBP7.16□□□□□ -1.26
LDLR-210ENST00000559340 P2RY1P47900 373 aa7.16□□□□□ -1.26
LDLR-210ENST00000559340 CAV2P51636 162 aa7.16□□□□□ -1.26
LDLR-210ENST00000559340 MFAP2P55001 183 aa7.16□□□□□ -1.26
LDLR-210ENST00000559340 HBG1P69891 147 aa7.16□□□□□ -1.26
LDLR-210ENST00000559340 HBG2P69892 147 aa7.16□□□□□ -1.26
LDLR-210ENST00000559340 CD69Q07108 199 aa7.16□□□□□ -1.26
LDLR-210ENST00000559340 LRRC37A5PQ49AS3 106 aa7.16□□□□□ -1.26
LDLR-210ENST00000559340 Q56UQ5 140 aa7.16□□□□□ -1.26
LDLR-210ENST00000559340 ACSM6Q6P461 480 aa7.16□□□□□ -1.26
LDLR-210ENST00000559340 PRSS54Q6PEW0 395 aa7.16□□□□□ -1.26
LDLR-210ENST00000559340 SPSB3Q6PJ21 355 aa7.16□□□□□ -1.26
LDLR-210ENST00000559340 OR1N2Q8NGR9 330 aa7.16□□□□□ -1.26
LDLR-210ENST00000559340 ZNF502Q8TBZ5 544 aa7.16□□□□□ -1.26
LDLR-210ENST00000559340 SCARB1Q8WTV0 552 aa7.16□□□□□ -1.26
LDLR-210ENST00000559340 LYRM2Q9NU23 88 aaPredicted RBP7.16□□□□□ -1.26
LDLR-210ENST00000559340 ANKRD34BA5PLL1 514 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 FNDC10F2Z333 226 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 LINC01619G3V211 115 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 H3BP45 60 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms