RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 CEACAM21Q3KPI0 293 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 C1orf194Q5T5A4 169 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 HCP5Q6MZN7 132 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 WDR82Q6UXN9 313 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 Q8IYB0 196 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 KIR2DL5AQ8N109 375 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 TMEM217Q8N7C4 229 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 OR5A2Q8NGI9 324 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 OR2T10Q8NGZ9 312 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 OR10J5Q8NHC4 309 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 PPP1R35Q8TAP8 253 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 TMEM68Q96MH6 324 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 HIST1H2AAQ96QV6 131 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 CCL13Q99616 98 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 ABHD14AQ9BUJ0 271 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 TMEM147Q9BVK8 224 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 PKIBQ9C010 78 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 KCNIP2Q9NS61 270 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 SLC39A9Q9NUM3 307 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 PSENENQ9NZ42 101 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 OR6C3Q9NZP0 311 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 ZNRD1Q9P1U0 126 aa4.74□□□□□ -1.65
USP3-212ENST00000559276 C17orf112F2Z3M2 114 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 TIMM23O14925 209 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 MPDU1O75352 247 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 LINC00614P0C842 121 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 RD3LP0DJH9 198 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 ESDP10768 282 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 BTF3P20290 206 aaKnown RBP4.73□□□□□ -1.65
USP3-212ENST00000559276 OR10J1P30954 320 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 CNN1P51911 297 aaKnown RBP4.73□□□□□ -1.65
USP3-212ENST00000559276 RPL23P62829 140 aaKnown RBP4.73□□□□□ -1.65
USP3-212ENST00000559276 PAFAH1B2P68402 229 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 PAX5Q02548 391 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 COL10A1Q03692 680 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 RELQ04864 619 aaPredicted RBP4.73□□□□□ -1.65
USP3-212ENST00000559276 HERPUD1Q15011 391 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 ADIRFQ15847 76 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 USF2Q15853 346 aaPredicted RBP4.73□□□□□ -1.65
USP3-212ENST00000559276 ZNF726P1Q15940 193 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 VWC2Q2TAL6 325 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 BEAN1Q3B7T3 259 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 COX19Q49B96 90 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 GFI1BQ5VTD9 330 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 STUMQ69YW2 141 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 SLC35E4Q6ICL7 350 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 TMEM14EPQ6UXP3 125 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 ZNF66Q6ZN08 573 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 Q6ZPA2 131 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 C16orf82Q7Z2V1 217 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 ZNF573Q86YE8 665 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 ZDHHC23Q8IYP9 409 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 ZNF664Q8N3J9 261 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 GBGT1Q8N5D6 347 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 OR10V1Q8NGI7 309 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 C8orf46Q8TAG6 207 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 MRPL30Q8TCC3 161 aaKnown RBP4.73□□□□□ -1.65
USP3-212ENST00000559276 LRRC29Q8WV35 223 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 PIGCQ92535 297 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 GPR146Q96CH1 333 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 GAFA1Q96PS6 74 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 DCTN5Q9BTE1 182 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 RBKSQ9H477 322 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 VPREB3Q9UKI3 123 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 GAB2Q9UQC2 676 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 SIGLEC9Q9Y336 463 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 MPC1Q9Y5U8 109 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 COL7A1Q02388 2944 aa4.73□□□□□ -1.65
USP3-212ENST00000559276 KMT2CQ8NEZ4 4911 aaKnown RBP4.72□□□□□ -1.65
USP3-212ENST00000559276 TET2Q6N021 2002 aaPredicted RBP4.72□□□□□ -1.65
USP3-212ENST00000559276 PLXNB1O43157 2135 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 TRBV9A0A0B4J1U6 114 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 IGKV1D-13A0A0B4J2D9 117 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 A0A1W2PRD5 423 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 A0A1W2PRF3 423 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 A0A1W2PRM7 423 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 FAM90A9PA6NNJ1 464 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 G3V4G9 280 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 CDIPTO14735 213 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 EREGO14944 169 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 NPFFO15130 113 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 SCTP09683 121 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 IGKV1-13P0DP09 117 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 GNG3P63215 75 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 TNFRSF9Q07011 255 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 SLC38A11Q08AI6 406 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 PDZD11Q5EBL8 140 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 KPRPQ5T749 579 aaPredicted RBP4.72□□□□□ -1.65
USP3-212ENST00000559276 CDPF1Q6NVV7 123 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 LCN15Q6UWW0 184 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 ZNF788Q6ZQV5 615 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 TMEM144Q7Z5S9 345 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 C11orf42Q8N5U0 333 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 ZNF709Q8N972 641 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 SCCPDHQ8NBX0 429 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 FAM110DQ8TAY7 271 aaPredicted RBP4.72□□□□□ -1.65
USP3-212ENST00000559276 PIFOQ8TCI5 191 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 CFHR4Q92496 578 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 MISP3Q96FF7 219 aa4.72□□□□□ -1.65
USP3-212ENST00000559276 C20orf144Q9BQM9 153 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms