RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 ZADH2Q8N4Q0 377 aa5.96□□□□□ -1.46
USP3-210ENST00000559192 CCL17Q92583 94 aa5.96□□□□□ -1.46
USP3-210ENST00000559192 AGMATQ9BSE5 352 aa5.96□□□□□ -1.46
USP3-210ENST00000559192 GEMIN7Q9H840 131 aaKnown RBP5.96□□□□□ -1.46
USP3-210ENST00000559192 IGLV3-12A0A075B6K2 115 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 PINLYPA6NC86 204 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 IGLV3-19P01714 112 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 COX5BP10606 129 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 MPV17P39210 176 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 PAX9P55771 341 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 MEIG1Q5JSS6 88 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 DCAF10Q5QP82 559 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 ORAOV1Q8WV07 137 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 CCL13Q99616 98 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 FANCMQ8IYD8 2048 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 FAM157AC9JC47 383 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 NDUFB3O43676 98 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 TNFSF13O75888 250 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 TIMP3P35625 211 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 TMEM177Q53S58 311 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 LPAR2Q9HBW0 351 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 TRAV8-1A0A0A6YYK1 113 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 IGKV1-6A0A0C4DH72 117 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 OCIAD2Q56VL3 154 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 CLEC2AQ6UVW9 174 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 WDR31Q8NA23 367 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 FAM222BQ8WU58 562 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 C18orf15Q96N68 181 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 DIRC2Q96SL1 478 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 PGPA6NDG6 321 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 PSG1P11464 419 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 LRRC10Q5BKY1 277 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 SAMD5Q5TGI4 173 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 INO80CQ6PI98 192 aaPredicted RBP5.95□□□□□ -1.46
USP3-210ENST00000559192 ZNRF1Q8ND25 227 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 OR52E5Q8NH55 327 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 GRAMD2BQ96HH9 432 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 CALYQ9NYX4 217 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 AMMECR1Q9Y4X0 333 aaPredicted RBP5.95□□□□□ -1.46
USP3-210ENST00000559192 TRAV9-2A0A087WT02 112 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 TRAV5A0A0B4J249 113 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 C8orf88P0DMB2 117 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 HSPE1P61604 102 aaKnown RBP5.95□□□□□ -1.46
USP3-210ENST00000559192 SSBP2P81877 361 aaPredicted RBP5.95□□□□□ -1.46
USP3-210ENST00000559192 HCP5Q6MZN7 132 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 TCF24Q7RTU0 167 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 ZNF479Q96JC4 524 aa5.95□□□□□ -1.46
USP3-210ENST00000559192 EAF1Q96JC9 268 aaPredicted RBP5.95□□□□□ -1.46
USP3-210ENST00000559192 NAA38Q9BRA0 125 aaKnown RBP5.95□□□□□ -1.46
USP3-210ENST00000559192 KIF26AQ9ULI4 1882 aaPredicted RBP5.94□□□□□ -1.46
USP3-210ENST00000559192 TRAV30A0A087WSZ9 112 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 NPSP0C0P6 89 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 PRB4P10163 310 aaPredicted RBP5.94□□□□□ -1.46
USP3-210ENST00000559192 PRTN3P24158 256 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 COX7A1P24310 79 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 MRPL14Q6P1L8 145 aaKnown RBP5.94□□□□□ -1.46
USP3-210ENST00000559192 ACP7Q6ZNF0 438 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 PPP1R32Q7Z5V6 425 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 OR4X2Q8NGF9 303 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 NPFFR1Q9GZQ6 430 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 IGHV3-72A0A0B4J1Y9 119 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 IGHV4-39P01824 125 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 GFRA1P56159 465 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 GGNQ86UU5 652 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 MRAP2Q96G30 205 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 TIMD4Q96H15 378 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 LOXL4Q96JB6 756 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 NOTCH4Q99466 2003 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 MGST3O14880 152 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 HTN1P15515 57 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 SEC11AP67812 179 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 HBBP68871 147 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 SRSF6Q13247 344 aaKnown RBP5.94□□□□□ -1.46
USP3-210ENST00000559192 ATP1A1-AS1Q5TC04 95 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 TMEM42Q69YG0 159 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 IMMP1LQ96LU5 166 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 ZNF703Q9H7S9 590 aaPredicted RBP5.94□□□□□ -1.46
USP3-210ENST00000559192 RNF7Q9UBF6 113 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 PPP1R17O96001 155 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 PFN1P07737 140 aaKnown RBP5.94□□□□□ -1.46
USP3-210ENST00000559192 PAX2Q02962 417 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 ZNF562Q6V9R5 426 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 OR1L8Q8NGR8 309 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 ONECUT1Q9UBC0 465 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 RNF115Q9Y4L5 304 aa5.94□□□□□ -1.46
USP3-210ENST00000559192 TRAV12-3A0A0B4J271 114 aa5.93□□□□□ -1.46
USP3-210ENST00000559192 FOXI3A8MTJ6 420 aaPredicted RBP5.93□□□□□ -1.46
USP3-210ENST00000559192 DLL1O00548 723 aa5.93□□□□□ -1.46
USP3-210ENST00000559192 MOSP00540 346 aa5.93□□□□□ -1.46
USP3-210ENST00000559192 RAB9AP51151 201 aa5.93□□□□□ -1.46
USP3-210ENST00000559192 GNG5P63218 68 aa5.93□□□□□ -1.46
USP3-210ENST00000559192 FAM201AQ5SY85 155 aa5.93□□□□□ -1.46
USP3-210ENST00000559192 C9orf153Q5TBE3 101 aa5.93□□□□□ -1.46
USP3-210ENST00000559192 RNASEH2CQ8TDP1 164 aaKnown RBP5.93□□□□□ -1.46
USP3-210ENST00000559192 TRAV21A0A0B4J279 112 aa5.93□□□□□ -1.46
USP3-210ENST00000559192 GAGE12BA1L429 117 aa5.93□□□□□ -1.46
USP3-210ENST00000559192 TMEM155Q4W5P6 130 aa5.93□□□□□ -1.46
USP3-210ENST00000559192 MBNL2Q5VZF2 373 aaKnown RBP5.93□□□□□ -1.46
USP3-210ENST00000559192 FAM71F2Q6NXP2 309 aa5.93□□□□□ -1.46
USP3-210ENST00000559192 ITLN1Q8WWA0 313 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms