RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 NDUFS6O75380 124 aaKnown RBP7.44□□□□□ -1.22
SPG11-214ENST00000558989 DUS4LO95620 317 aaKnown RBP7.44□□□□□ -1.22
SPG11-214ENST00000558989 HPRT1P00492 218 aa7.44□□□□□ -1.22
SPG11-214ENST00000558989 KRASP01116 189 aa7.44□□□□□ -1.22
SPG11-214ENST00000558989 IGHV3-23P01764 117 aa7.44□□□□□ -1.22
SPG11-214ENST00000558989 OR8U8P0C7N1 319 aa7.44□□□□□ -1.22
SPG11-214ENST00000558989 OR9G9P0C7N8 305 aa7.44□□□□□ -1.22
SPG11-214ENST00000558989 G6PCP35575 357 aa7.44□□□□□ -1.22
SPG11-214ENST00000558989 RPL8P62917 257 aaKnown RBP7.44□□□□□ -1.22
SPG11-214ENST00000558989 RNASE10Q5GAN6 216 aaKnown RBP7.44□□□□□ -1.22
SPG11-214ENST00000558989 TMEM268Q5VZI3 342 aa7.44□□□□□ -1.22
SPG11-214ENST00000558989 CMTM1Q8IZ96 169 aa7.44□□□□□ -1.22
SPG11-214ENST00000558989 MCFD2Q8NI22 146 aa7.44□□□□□ -1.22
SPG11-214ENST00000558989 VSTM2AQ8TAG5 236 aa7.44□□□□□ -1.22
SPG11-214ENST00000558989 TMEM167AQ8TBQ9 72 aa7.44□□□□□ -1.22
SPG11-214ENST00000558989 HINT2Q9BX68 163 aa7.44□□□□□ -1.22
SPG11-214ENST00000558989 SLA2Q9H6Q3 261 aa7.44□□□□□ -1.22
SPG11-214ENST00000558989 CCDC59Q9P031 241 aaKnown RBP7.44□□□□□ -1.22
SPG11-214ENST00000558989 PUS1Q9Y606 427 aaKnown RBP eCLIP7.44□□□□□ -1.22
SPG11-214ENST00000558989 OVOL1O14753 267 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 OR2J3O76001 311 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 TRBV12-3P01733 135 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 IL6RP08887 468 aaPredicted RBP7.43□□□□□ -1.22
SPG11-214ENST00000558989 NQO2P16083 231 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 ADAD2Q8NCV1 583 aaKnown RBP7.43□□□□□ -1.22
SPG11-214ENST00000558989 DGCR14Q96DF8 476 aaKnown RBP7.43□□□□□ -1.22
SPG11-214ENST00000558989 PRR25Q96S07 402 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 SPIN2AQ99865 258 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 SPIN2BQ9BPZ2 258 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 MCRIP2Q9BUT9 160 aaKnown RBP7.43□□□□□ -1.22
SPG11-214ENST00000558989 MTFP1Q9UDX5 166 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 A0A1B0GW64 132 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 F5H697 171 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 K7EIL1 84 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 TRIAP1O43715 76 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 RAB3DO95716 219 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 HSPB1P04792 205 aaKnown RBP7.43□□□□□ -1.22
SPG11-214ENST00000558989 HLA-GP17693 338 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 F2RP25116 425 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 TAS2R31P59538 309 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 OR2B8PP59922 312 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 ERVK-16P61578 105 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 RHOGP84095 191 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 ZNF45Q02386 682 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 MSMO1Q15800 293 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 C9orf66Q5T8R8 295 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 RNASEKQ6P5S7 137 aaKnown RBP7.43□□□□□ -1.22
SPG11-214ENST00000558989 BORCS5Q969J3 196 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 SLIRPQ9GZT3 109 aaKnown RBP7.43□□□□□ -1.22
SPG11-214ENST00000558989 AKIP1Q9NQ31 210 aa7.43□□□□□ -1.22
SPG11-214ENST00000558989 A0A0G2JLM5 398 aa7.42□□□□□ -1.22
SPG11-214ENST00000558989 MARCH11A6NNE9 402 aa7.42□□□□□ -1.22
SPG11-214ENST00000558989 GABARAPH6UMI1 98 aa7.42□□□□□ -1.22
SPG11-214ENST00000558989 UPK2O00526 184 aa7.42□□□□□ -1.22
SPG11-214ENST00000558989 S100GP29377 79 aa7.42□□□□□ -1.22
SPG11-214ENST00000558989 TAS2R19P59542 299 aa7.42□□□□□ -1.22
SPG11-214ENST00000558989 POLR2GP62487 172 aaKnown RBP eCLIP7.42□□□□□ -1.22
SPG11-214ENST00000558989 RUNX1Q01196 453 aa7.42□□□□□ -1.22
SPG11-214ENST00000558989 STEAP1BQ6NZ63 245 aa7.42□□□□□ -1.22
SPG11-214ENST00000558989 PQLC2Q6ZP29 291 aa7.42□□□□□ -1.22
SPG11-214ENST00000558989 OR10W1Q8NGF6 305 aa7.42□□□□□ -1.22
SPG11-214ENST00000558989 COMMD5Q9GZQ3 224 aa7.42□□□□□ -1.22
SPG11-214ENST00000558989 BET1LQ9NYM9 111 aa7.42□□□□□ -1.22
SPG11-214ENST00000558989 DNAH3Q8TD57 4116 aa7.42□□□□□ -1.22
SPG11-214ENST00000558989 RBFOX2O43251 390 aaKnown RBP eCLIP7.41□□□□□ -1.22
SPG11-214ENST00000558989 DEFA4P12838 97 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 TNFSF8P32971 234 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 ATP5G2Q06055 141 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 EXOSC2Q13868 293 aaKnown RBP7.41□□□□□ -1.22
SPG11-214ENST00000558989 ZNF585BQ52M93 769 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 VAX1Q5SQQ9 334 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 LPCAT3Q6P1A2 487 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 CCDC190Q86UF4 302 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 SLC38A6Q8IZM9 456 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 TTC9CQ8N5M4 171 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 TMEM229BQ8NBD8 167 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 ENKURQ8TC29 256 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 MARCH1Q8TCQ1 289 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 CACNG8Q8WXS5 425 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 ZC4H2Q9NQZ6 224 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 SLC2A9Q9NRM0 540 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 FABP12A6NFH5 140 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 PPP5D1E7EU14 171 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 H3BUA1 57 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 VCYO14598 125 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 HLA-AP01891 365 aaKnown RBP7.41□□□□□ -1.22
SPG11-214ENST00000558989 PIGPP57054 158 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 IZUMO4Q1ZYL8 232 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 C15orf32Q32M92 178 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 SP6Q3SY56 376 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 C15orf40Q8WUR7 153 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 SMIM4Q8WVI0 70 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 AIFM2Q9BRQ8 373 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 RSL24D1Q9UHA3 163 aaKnown RBP7.41□□□□□ -1.22
SPG11-214ENST00000558989 SELENOKQ9Y6D0 94 aa7.41□□□□□ -1.22
SPG11-214ENST00000558989 IGHV3-21A0A0B4J1V1 117 aa7.4□□□□□ -1.23
SPG11-214ENST00000558989 NDUFB8O95169 186 aa7.4□□□□□ -1.23
SPG11-214ENST00000558989 PSMB6P28072 239 aa7.4□□□□□ -1.23
SPG11-214ENST00000558989 MAS1LP35410 378 aa7.4□□□□□ -1.23
SPG11-214ENST00000558989 SYNJ2BPP57105 145 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms