RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 ETV3LQ6ZN32 361 aa14.16□□□□□ -0.14
CLPX-203ENST00000558958 FANCD2OSQ96PS1 177 aa14.16□□□□□ -0.14
CLPX-203ENST00000558958 ZC4H2Q9NQZ6 224 aa14.16□□□□□ -0.14
CLPX-203ENST00000558958 KLK9Q9UKQ9 250 aa14.16□□□□□ -0.14
CLPX-203ENST00000558958 HSPB11Q9Y547 144 aa14.16□□□□□ -0.14
CLPX-203ENST00000558958 PRSS46E5RG02 174 aa14.15□□□□□ -0.14
CLPX-203ENST00000558958 AP2S1P53680 142 aaPredicted RBP14.15□□□□□ -0.14
CLPX-203ENST00000558958 SRSF2Q01130 221 aaKnown RBP14.15□□□□□ -0.14
CLPX-203ENST00000558958 ARL16Q0P5N6 197 aa14.15□□□□□ -0.14
CLPX-203ENST00000558958 ZNF345Q14585 488 aa14.15□□□□□ -0.14
CLPX-203ENST00000558958 LGALSLQ3ZCW2 172 aaPredicted RBP14.15□□□□□ -0.14
CLPX-203ENST00000558958 OR8G2PQ6IF36 304 aa14.15□□□□□ -0.14
CLPX-203ENST00000558958 TMEM217Q8N7C4 229 aa14.15□□□□□ -0.14
CLPX-203ENST00000558958 RNASEH2CQ8TDP1 164 aaKnown RBP14.15□□□□□ -0.14
CLPX-203ENST00000558958 BSCL2Q96G97 398 aaPredicted RBP14.15□□□□□ -0.14
CLPX-203ENST00000558958 GON7Q9BXV9 100 aa14.15□□□□□ -0.14
CLPX-203ENST00000558958 C16orf95Q9H693 158 aa14.15□□□□□ -0.14
CLPX-203ENST00000558958 IGLV11-55A0A075B6I3 123 aa14.14□□□□□ -0.15
CLPX-203ENST00000558958 SCAF4O95104 1147 aaKnown RBP14.14□□□□□ -0.15
CLPX-203ENST00000558958 NDUFA7O95182 113 aa14.14□□□□□ -0.15
CLPX-203ENST00000558958 LAMTOR1Q6IAA8 161 aa14.14□□□□□ -0.15
CLPX-203ENST00000558958 C9orf62Q8N4C0 152 aa14.14□□□□□ -0.15
CLPX-203ENST00000558958 KCNRGQ8N5I3 272 aa14.14□□□□□ -0.15
CLPX-203ENST00000558958 OR10P1Q8NGE3 313 aa14.14□□□□□ -0.15
CLPX-203ENST00000558958 A0A0D9SG52 128 aa14.13□□□□□ -0.15
CLPX-203ENST00000558958 CORTO00230 105 aa14.13□□□□□ -0.15
CLPX-203ENST00000558958 CYB5BO43169 146 aa14.13□□□□□ -0.15
CLPX-203ENST00000558958 BRI3O95415 125 aa14.13□□□□□ -0.15
CLPX-203ENST00000558958 IGLV1-40P01703 118 aa14.13□□□□□ -0.15
CLPX-203ENST00000558958 HBG1P69891 147 aa14.13□□□□□ -0.15
CLPX-203ENST00000558958 HBG2P69892 147 aa14.13□□□□□ -0.15
CLPX-203ENST00000558958 MISP3Q96FF7 219 aa14.13□□□□□ -0.15
CLPX-203ENST00000558958 JMJD1CQ15652 2540 aa14.13□□□□□ -0.15
CLPX-203ENST00000558958 TRBV9A0A0B4J1U6 114 aa14.12□□□□□ -0.15
CLPX-203ENST00000558958 H3BUA1 57 aa14.12□□□□□ -0.15
CLPX-203ENST00000558958 IGHG4P01861 327 aa14.12□□□□□ -0.15
CLPX-203ENST00000558958 HIST1H1BP16401 226 aaKnown RBP14.12□□□□□ -0.15
CLPX-203ENST00000558958 S100A11P31949 105 aa14.12□□□□□ -0.15
CLPX-203ENST00000558958 SLC38A11Q08AI6 406 aa14.12□□□□□ -0.15
CLPX-203ENST00000558958 ZNF329Q86UD4 541 aa14.12□□□□□ -0.15
CLPX-203ENST00000558958 OR5C1Q8NGR4 320 aa14.12□□□□□ -0.15
CLPX-203ENST00000558958 PINX1Q96BK5 328 aaKnown RBP14.12□□□□□ -0.15
CLPX-203ENST00000558958 FNDC4Q9H6D8 234 aaPredicted RBP14.12□□□□□ -0.15
CLPX-203ENST00000558958 ZNF355PQ9NSJ1 428 aa14.12□□□□□ -0.15
CLPX-203ENST00000558958 PSMB11A5LHX3 300 aa14.12□□□□□ -0.15
CLPX-203ENST00000558958 EXOSC2Q13868 293 aaKnown RBP14.12□□□□□ -0.15
CLPX-203ENST00000558958 MLANAQ16655 118 aa14.12□□□□□ -0.15
CLPX-203ENST00000558958 TMUB2Q71RG4 321 aa14.12□□□□□ -0.15
CLPX-203ENST00000558958 OR1S2Q8NGQ3 325 aa14.12□□□□□ -0.15
CLPX-203ENST00000558958 LINC01006Q8NI28 216 aa14.12□□□□□ -0.15
CLPX-203ENST00000558958 FBXL17Q9UF56 701 aa14.12□□□□□ -0.15
CLPX-203ENST00000558958 C2CD3Q4AC94 2353 aa14.11□□□□□ -0.15
CLPX-203ENST00000558958 I3L2K1 104 aa14.11□□□□□ -0.15
CLPX-203ENST00000558958 K7EIM0 57 aa14.11□□□□□ -0.15
CLPX-203ENST00000558958 OR2J3O76001 311 aa14.11□□□□□ -0.15
CLPX-203ENST00000558958 MT-CO2P00403 227 aa14.11□□□□□ -0.15
CLPX-203ENST00000558958 GPX4P36969 197 aaPredicted RBP14.11□□□□□ -0.15
CLPX-203ENST00000558958 OPRK1P41145 380 aa14.11□□□□□ -0.15
CLPX-203ENST00000558958 SLC35B1P78383 322 aa14.11□□□□□ -0.15
CLPX-203ENST00000558958 CD69Q07108 199 aa14.11□□□□□ -0.15
CLPX-203ENST00000558958 C10orf99Q6UWK7 81 aa14.11□□□□□ -0.15
CLPX-203ENST00000558958 CACNG8Q8WXS5 425 aa14.11□□□□□ -0.15
CLPX-203ENST00000558958 MS4A10Q96PG2 267 aa14.11□□□□□ -0.15
CLPX-203ENST00000558958 GGACTQ9BVM4 153 aa14.11□□□□□ -0.15
CLPX-203ENST00000558958 SMIM3Q9BZL3 60 aa14.11□□□□□ -0.15
CLPX-203ENST00000558958 ARL6Q9H0F7 186 aa14.11□□□□□ -0.15
CLPX-203ENST00000558958 THYN1Q9P016 225 aa14.11□□□□□ -0.15
CLPX-203ENST00000558958 TMEM89A2RUT3 159 aa14.1□□□□□ -0.15
CLPX-203ENST00000558958 NDUFB8O95169 186 aa14.1□□□□□ -0.15
CLPX-203ENST00000558958 DLK1P80370 383 aa14.1□□□□□ -0.15
CLPX-203ENST00000558958 RHOGP84095 191 aa14.1□□□□□ -0.15
CLPX-203ENST00000558958 CLINT1Q14677 625 aa14.1□□□□□ -0.15
CLPX-203ENST00000558958 ATP6V1FQ16864 119 aa14.1□□□□□ -0.15
CLPX-203ENST00000558958 CENPVQ7Z7K6 275 aaPredicted RBP14.1□□□□□ -0.15
CLPX-203ENST00000558958 LILRB2Q8N423 598 aa14.1□□□□□ -0.15
CLPX-203ENST00000558958 NECAP1Q8NC96 275 aa14.1□□□□□ -0.15
CLPX-203ENST00000558958 OR4F5Q8NH21 305 aa14.1□□□□□ -0.15
CLPX-203ENST00000558958 WFDC1Q9HC57 220 aa14.1□□□□□ -0.15
CLPX-203ENST00000558958 FBXL7Q9UJT9 491 aa14.1□□□□□ -0.15
CLPX-203ENST00000558958 RPS10-NUDT3A0A1W2PQS6 291 aa14.09□□□□□ -0.15
CLPX-203ENST00000558958 TRGV3P03979 118 aa14.09□□□□□ -0.15
CLPX-203ENST00000558958 PSMB8P28062 276 aa14.09□□□□□ -0.15
CLPX-203ENST00000558958 TEX38Q6PEX7 206 aa14.09□□□□□ -0.15
CLPX-203ENST00000558958 SLC16A13Q7RTY0 426 aa14.09□□□□□ -0.15
CLPX-203ENST00000558958 ATP5SQ99766 215 aa14.09□□□□□ -0.15
CLPX-203ENST00000558958 KLK15Q9H2R5 256 aa14.09□□□□□ -0.15
CLPX-203ENST00000558958 SLA2Q9H6Q3 261 aa14.09□□□□□ -0.15
CLPX-203ENST00000558958 IGHV3-21A0A0B4J1V1 117 aa14.08□□□□□ -0.16
CLPX-203ENST00000558958 FAM223BA6NKX1 122 aa14.08□□□□□ -0.16
CLPX-203ENST00000558958 FNDC10F2Z333 226 aa14.08□□□□□ -0.16
CLPX-203ENST00000558958 TAAR5O14804 337 aa14.08□□□□□ -0.16
CLPX-203ENST00000558958 PF4V1P10720 104 aa14.08□□□□□ -0.16
CLPX-203ENST00000558958 RAB9AP51151 201 aa14.08□□□□□ -0.16
CLPX-203ENST00000558958 DEFA5Q01523 94 aa14.08□□□□□ -0.16
CLPX-203ENST00000558958 FOXE3Q13461 319 aa14.08□□□□□ -0.16
CLPX-203ENST00000558958 VWC2Q2TAL6 325 aa14.08□□□□□ -0.16
CLPX-203ENST00000558958 ETFRF1Q6IPR1 90 aa14.08□□□□□ -0.16
CLPX-203ENST00000558958 FAM223AQ8IWN6 122 aa14.08□□□□□ -0.16
CLPX-203ENST00000558958 WIPF2Q8TF74 440 aaPredicted RBP14.08□□□□□ -0.16
CLPX-203ENST00000558958 SCARB1Q8WTV0 552 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms