RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 IGKV1D-33P01593 117 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 IGKV1-33P01594 117 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 IGHV3-7P01780 117 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 MAS1LP35410 378 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 RPL35P42766 123 aaKnown RBP6.2□□□□□ -1.42
LRRC28-211ENST00000558890 UBE2E1P51965 193 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 ZNF134P52741 427 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 LINC00205P59089 165 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 HSPE1P61604 102 aaKnown RBP6.2□□□□□ -1.42
LRRC28-211ENST00000558890 LCN2P80188 198 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 MEF2BQ02080 365 aaPredicted RBP6.2□□□□□ -1.42
LRRC28-211ENST00000558890 RAB31Q13636 194 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 HABP2Q14520 560 aaPredicted RBP6.2□□□□□ -1.42
LRRC28-211ENST00000558890 HNF4GQ14541 408 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 POU2AF1Q16633 256 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 MINOS1Q5TGZ0 78 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 FAM90A2PQ658T7 463 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 SLC25A48Q6ZT89 311 aaKnown RBP6.2□□□□□ -1.42
LRRC28-211ENST00000558890 C9orf139Q6ZV77 190 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 SSX7Q7RTT5 188 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 RPP25LQ8N5L8 163 aaKnown RBP6.2□□□□□ -1.42
LRRC28-211ENST00000558890 OR13D1Q8NGV5 346 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 LEAP2Q969E1 77 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 RHOVQ96L33 236 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 CTDSP1Q9GZU7 261 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 TMEM133Q9H2Q1 129 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 PLEKHA3Q9HB20 300 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 HIF1ANQ9NWT6 349 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 NAT8Q9UHE5 227 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 TBL2Q9Y4P3 447 aaKnown RBP6.2□□□□□ -1.42
LRRC28-211ENST00000558890 AMMECR1Q9Y4X0 333 aaPredicted RBP6.2□□□□□ -1.42
LRRC28-211ENST00000558890 MINOS1-NBL1R4GNA1 71 aa6.2□□□□□ -1.42
LRRC28-211ENST00000558890 SEC14L6B5MCN3 397 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 CLDN34H7C241 214 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 CRLF1O75462 422 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 KBTBD11O94819 623 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 TOX4O94842 621 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 TGFAP01135 160 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 IGLV1-47P01700 117 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 FBP1P09467 338 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 HNF1AP20823 631 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 MDKP21741 143 aaPredicted RBP6.19□□□□□ -1.42
LRRC28-211ENST00000558890 IL3RAP26951 378 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 CEACAM3P40198 252 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 OPRK1P41145 380 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 RPS10P46783 165 aaKnown RBP6.19□□□□□ -1.42
LRRC28-211ENST00000558890 ATP5IP56385 69 aaPredicted RBP6.19□□□□□ -1.42
LRRC28-211ENST00000558890 ZNF674Q2M3X9 581 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 OR4A47Q6IF82 309 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 CYP2G1PQ6ZSU1 146 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 C1QL4Q86Z23 238 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 LINC00518Q8N0U6 118 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 VKORC1L1Q8N0U8 176 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 Q8N7P7 452 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 ZNF383Q8NA42 475 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 OR4F5Q8NH21 305 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 OR9G1Q8NH87 305 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 RAB24Q969Q5 203 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 OR4F4Q96R69 305 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 SMIM7Q9BQ49 75 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 TCEAL7Q9BRU2 100 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 HINT2Q9BX68 163 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 CLEC7AQ9BXN2 247 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 YAE1D1Q9NRH1 226 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 TMEM14BQ9NUH8 114 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 FKBP11Q9NYL4 201 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 ZNF257Q9Y2Q1 563 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 OR51B2Q9Y5P1 312 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 PXMP4Q9Y6I8 212 aa6.19□□□□□ -1.42
LRRC28-211ENST00000558890 IGHV2-26A0A0B4J1V2 119 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 ODF3BA8MYP8 253 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 FNDC10F2Z333 226 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 F6UZH7 168 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 UPK2O00526 184 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 RRHO14718 337 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 MT-CO2P00403 227 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 S100A8P05109 93 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 S100A9P06702 114 aaKnown RBP6.18□□□□□ -1.42
LRRC28-211ENST00000558890 S100PP25815 95 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 SMCPP49901 116 aaPredicted RBP6.18□□□□□ -1.42
LRRC28-211ENST00000558890 PRRX1P54821 245 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 ADIRFQ15847 76 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 ZNF833PQ6ZTB9 187 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 PRIMA1Q86XR5 153 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 OR5B3Q8NH48 314 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 OSR1Q8TAX0 266 aaPredicted RBP6.18□□□□□ -1.42
LRRC28-211ENST00000558890 NANPQ8TBE9 248 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 RPUSD4Q96CM3 377 aaKnown RBP6.18□□□□□ -1.42
LRRC28-211ENST00000558890 YPEL4Q96NS1 127 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 OR5B12Q96R08 314 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 TBX15Q96SF7 602 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 GGTLC1Q9BX51 225 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 C7orf69Q9H7B7 122 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 SDF2L1Q9HCN8 221 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 NPVFQ9HCQ7 196 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 TMEM242Q9NWH2 141 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 BET1LQ9NYM9 111 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 ONECUT1Q9UBC0 465 aa6.18□□□□□ -1.42
LRRC28-211ENST00000558890 KIAA2026Q5HYC2 2103 aa6.17□□□□□ -1.42
LRRC28-211ENST00000558890 TRAV3A0A0B4J244 114 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms