RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 PRR20CP86479 221 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 PRR20DP86480 221 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 PRR20BP86481 221 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 PRR20AP86496 221 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 CT45A1Q5HYN5 189 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 DMRTC1Q5HYR2 192 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 BVES-AS1Q5T3Y7 98 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 MBNL2Q5VZF2 373 aaKnown RBP4.57□□□□□ -1.68
GABPB1-207ENST00000558335 SPINK14Q6IE38 97 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 SLC25A34Q6PIV7 304 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 C16orf82Q7Z2V1 217 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 GCSAMQ8N6F7 178 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 MDS2Q8NDY4 140 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 ATP6V0E2Q8NHE4 81 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 CT45A3Q8NHU0 189 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 BLNKQ8WV28 456 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 RCHY1Q96PM5 261 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 NDFIP1Q9BT67 221 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 GGTLC1Q9BX51 225 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 NPCDR1Q9BY65 106 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 OR2D2Q9H210 308 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 TMEM133Q9H2Q1 129 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 ZNF665Q9H7R5 613 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 NPVFQ9HCQ7 196 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 TMEM167BQ9NRX6 74 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 WDR83OSQ9Y284 106 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 CSDC2Q9Y534 153 aaKnown RBP4.57□□□□□ -1.68
GABPB1-207ENST00000558335 CHD7Q9P2D1 2997 aa4.57□□□□□ -1.68
GABPB1-207ENST00000558335 ARHGAP21Q5T5U3 1957 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 TRAV17A0A0B4J275 112 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 ODAMA1E959 279 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 C7orf71A4D174 169 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 SMIM9A6NGZ8 99 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 FABP5P3A8MUU1 101 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 C9JCJ5 164 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 H3BP45 60 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 TM4SF5O14894 197 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 CEACAM4O75871 244 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 MT-CO3P00414 261 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 GYPAP02724 150 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 ORM1P02763 201 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 OR9G9P0C7N8 305 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 C8orf88P0DMB2 117 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 HIST1H1EP10412 219 aaKnown RBP4.56□□□□□ -1.68
GABPB1-207ENST00000558335 CRISP2P16562 243 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 TNFRSF1AP19438 455 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 PMCHP20382 165 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 FOXG1P55316 489 aaPredicted RBP4.56□□□□□ -1.68
GABPB1-207ENST00000558335 RPL15P61313 204 aaKnown RBP4.56□□□□□ -1.68
GABPB1-207ENST00000558335 KLRD1Q13241 179 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 DAZAP2Q15038 168 aaPredicted RBP4.56□□□□□ -1.68
GABPB1-207ENST00000558335 PDCD1Q15116 288 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 CR1LQ2VPA4 569 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 ZNF766Q5HY98 468 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 ACP7Q6ZNF0 438 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 Q6ZPA2 131 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 FAM214BQ7L5A3 538 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 BAGE3Q86Y29 109 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 BAGE2Q86Y30 109 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 ODF3L1Q8IXM7 274 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 RPP25LQ8N5L8 163 aaKnown RBP4.56□□□□□ -1.68
GABPB1-207ENST00000558335 TEX29Q8N6K0 151 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 C18orf32Q8TCD1 76 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 RNF125Q96EQ8 232 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 S1PR3Q99500 378 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 COL25A1Q9BXS0 654 aaPredicted RBP4.56□□□□□ -1.68
GABPB1-207ENST00000558335 FAM234AQ9H0X4 552 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 HEYLQ9NQ87 328 aaPredicted RBP4.56□□□□□ -1.68
GABPB1-207ENST00000558335 CRIM1Q9NZV1 1036 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 OR1A1Q9P1Q5 309 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 SLC25A10Q9UBX3 287 aaPredicted RBP4.56□□□□□ -1.68
GABPB1-207ENST00000558335 PRNDQ9UKY0 176 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 ZNF257Q9Y2Q1 563 aa4.56□□□□□ -1.68
GABPB1-207ENST00000558335 CHD3Q12873 2000 aaKnown RBP4.56□□□□□ -1.68
GABPB1-207ENST00000558335 KNL1Q8NG31 2342 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 NCKAP5O14513 1909 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 A0A087WX48 190 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 A0A1B0GX51 115 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 PINLYPA6NC86 204 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 OR2T8A6NH00 312 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 B5MCH6 92 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 C12orf77C9JDV5 145 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 H0YJW9 148 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 GDF9O60383 454 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 LILRA1O75019 489 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 IGKV1-39P01597 117 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 IGKV3-15P01624 115 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 IGLV2-14P01704 120 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 IGKV1D-39P04432 117 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 GRPP07492 148 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 SPINK8P0C7L1 97 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 MDKP21741 143 aaPredicted RBP4.55□□□□□ -1.68
GABPB1-207ENST00000558335 CRYBB3P26998 211 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 UQCRFS1P47985 274 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 TLE1Q04724 770 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 EIF4EBP1Q13541 118 aaPredicted RBP4.55□□□□□ -1.68
GABPB1-207ENST00000558335 EDDM3AQ14507 147 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 EFNB3Q15768 340 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 ZNF726P1Q15940 193 aa4.55□□□□□ -1.68
GABPB1-207ENST00000558335 HLA-DRB5Q30154 266 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms