RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 ZNF230Q9UIE0 474 aaPredicted RBP6.83□□□□□ -1.32
USP3-208ENST00000558285 FOXA2Q9Y261 457 aaPredicted RBP6.83□□□□□ -1.32
USP3-208ENST00000558285 MGAM2Q2M2H8 2515 aa6.83□□□□□ -1.32
USP3-208ENST00000558285 A0A1B0GW64 132 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 IFITM10A6NMD0 228 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 H3BUA1 57 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 HRASP01112 189 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 PET100P0DJ07 73 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 PSMB6P28072 239 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 SULT1A1P50225 295 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 SRSF3P84103 164 aaKnown RBP6.82□□□□□ -1.32
USP3-208ENST00000558285 ODF1Q14990 250 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 JOSD1Q15040 202 aaPredicted RBP6.82□□□□□ -1.32
USP3-208ENST00000558285 AARDQ4LEZ3 155 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 KCTD9Q7L273 389 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 PPP1R27Q86WC6 154 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 HOGA1Q86XE5 327 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 CMTM1Q8IZ96 169 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 HIST3H2BBQ8N257 126 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 RNF152Q8N8N0 203 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 OR10D4PQ8NGN7 298 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 C4orf3Q8WVX3 66 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 ARPC1AQ92747 370 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 AQP10Q96PS8 301 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 SLC2A8Q9NY64 477 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 DOK5Q9P104 306 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 VSIG4Q9Y279 399 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 FBXO7Q9Y3I1 522 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 DNHD1Q96M86 4753 aa6.82□□□□□ -1.32
USP3-208ENST00000558285 IGKV1-6A0A0C4DH72 117 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 A0A0G2JLM5 398 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 SMCO3A2RU48 225 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 M0R143 59 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 MPPED1O15442 326 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 CYB5BO43169 146 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 ADAP1O75689 374 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 GCGP01275 180 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 OR5AC1P0C628 307 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 UBE2MP61081 183 aaKnown RBP6.81□□□□□ -1.32
USP3-208ENST00000558285 MEF2DQ14814 521 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 PSG5Q15238 335 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 ECSCRQ19T08 205 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 AKIRIN2Q53H80 203 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 TMEM177Q53S58 311 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 ACTBL2Q562R1 376 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 FAM53AQ6NSI3 398 aaPredicted RBP6.81□□□□□ -1.32
USP3-208ENST00000558285 STEAP1BQ6NZ63 245 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 LYG2Q86SG7 212 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 SLC25A42Q86VD7 318 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 TEX45Q8NA69 505 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 LFNGQ8NES3 379 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 WFDC9Q8NEX5 89 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 OR5H2Q8NGV7 314 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 MITD1Q8WV92 249 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 UBE2E2Q96LR5 201 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 PHB2Q99623 299 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 FBXL15Q9H469 300 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 CYTL1Q9NRR1 136 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 CHTOPQ9Y3Y2 248 aaKnown RBP6.81□□□□□ -1.32
USP3-208ENST00000558285 TENM1Q9UKZ4 2725 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 ATP6V0E1O15342 81 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 SLC25A17O43808 307 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 TUSC2O75896 110 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 YIF1AO95070 293 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 UBE2KP61086 200 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 CX3CL1P78423 397 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 PLA2G7Q13093 441 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 DHRS2Q13268 280 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 FXYD3Q14802 87 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 UNQ5815/PRO19632Q6UWF5 114 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 MMD2Q8IY49 270 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 SLC24A4Q8NFF2 622 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 OR51S1Q8NGJ8 323 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 OR13C8Q8NGS7 320 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 DTD1Q8TEA8 209 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 BSCL2Q96G97 398 aaPredicted RBP6.81□□□□□ -1.32
USP3-208ENST00000558285 CCDC140Q96MF4 163 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 SPIN2AQ99865 258 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 SPIN2BQ9BPZ2 258 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 PBDC1Q9BVG4 233 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 HRH4Q9H3N8 390 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 ZNF355PQ9NSJ1 428 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 LINC00527Q9UJ94 153 aa6.81□□□□□ -1.32
USP3-208ENST00000558285 IGHV7-81A0A0B4J1V7 117 aa6.8□□□□□ -1.32
USP3-208ENST00000558285 A0A0B4J2A0 478 aa6.8□□□□□ -1.32
USP3-208ENST00000558285 C13orf42A0A1B0GVH6 325 aa6.8□□□□□ -1.32
USP3-208ENST00000558285 A0A1W2PN81 502 aa6.8□□□□□ -1.32
USP3-208ENST00000558285 M0R036 132 aa6.8□□□□□ -1.32
USP3-208ENST00000558285 CCL24O00175 119 aa6.8□□□□□ -1.32
USP3-208ENST00000558285 OR2C1O95371 312 aa6.8□□□□□ -1.32
USP3-208ENST00000558285 IFNA6P05013 189 aa6.8□□□□□ -1.32
USP3-208ENST00000558285 AADACP22760 399 aa6.8□□□□□ -1.32
USP3-208ENST00000558285 FCGR2CP31995 323 aa6.8□□□□□ -1.32
USP3-208ENST00000558285 DUTP33316 252 aaKnown RBP6.8□□□□□ -1.32
USP3-208ENST00000558285 CHRNA7P36544 502 aa6.8□□□□□ -1.32
USP3-208ENST00000558285 CRIP2P52943 208 aaPredicted RBP6.8□□□□□ -1.32
USP3-208ENST00000558285 NDUFA6P56556 154 aa6.8□□□□□ -1.32
USP3-208ENST00000558285 TAS2R31P59538 309 aa6.8□□□□□ -1.32
USP3-208ENST00000558285 ERVK-16P61578 105 aa6.8□□□□□ -1.32
USP3-208ENST00000558285 GNB1P62873 340 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms