RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 DLX4Q92988 240 aaPredicted RBP3.09□□□□□ -1.91
ATXN3-248ENST00000558190 IGKV3OR2-268A0A0C4DH90 116 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 CXorf51AA0A1B0GTR3 108 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF688P0C7X2 276 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 FER1L4A9Z1Z3 1794 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 LAMTOR5O43504 91 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 OR9G1Q8NH87 305 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 SFXN3Q9BWM7 321 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 HIST1H4AP62805 103 aaKnown RBP3.09□□□□□ -1.92
ATXN3-248ENST00000558190 C8orf46Q8TAG6 207 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 SARAFQ96BY9 339 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 SPANXDQ9BXN6 97 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 H3BMM0 161 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 SPACA3Q8IXA5 215 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 NUP153P49790 1475 aaKnown RBP3.09□□□□□ -1.92
ATXN3-248ENST00000558190 LYL1P12980 280 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 CENPVQ7Z7K6 275 aaPredicted RBP3.09□□□□□ -1.92
ATXN3-248ENST00000558190 VGLL1Q99990 258 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 CHODLQ9H9P2 273 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 KLF2Q9Y5W3 355 aaPredicted RBP3.09□□□□□ -1.92
ATXN3-248ENST00000558190 CEND1Q8N111 149 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 MAP3K4Q9Y6R4 1608 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 ABCA6Q8N139 1617 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF815PA8K554 130 aa3.09□□□□□ -1.92
ATXN3-248ENST00000558190 LOC102723996A0A087X1L8 192 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 RAMP3O60896 148 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 LINC00271P0C7V0 271 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 LINC00158P58513 81 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 KHDC1LQ5JSQ8 128 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 LYZL4Q96KX0 146 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 SPXQ9BT56 116 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 DLX6P56179 175 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 CDX4O14627 284 aaPredicted RBP3.08□□□□□ -1.92
ATXN3-248ENST00000558190 EGR4Q05215 589 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 GLMPQ8WWB7 406 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 TRAV24A0A0B4J272 114 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 RBX1P62877 108 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 DEFB103AP81534 67 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 APOBEC4Q8WW27 367 aaKnown RBP3.08□□□□□ -1.92
ATXN3-248ENST00000558190 PSG8Q9UQ74 426 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 YPEL3P61236 119 aaPredicted RBP3.08□□□□□ -1.92
ATXN3-248ENST00000558190 EBLN2Q6P2I7 272 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 ORMDL3Q8N138 153 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 GGTLC1Q9BX51 225 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 MRPS18CQ9Y3D5 142 aaKnown RBP3.08□□□□□ -1.92
ATXN3-248ENST00000558190 IL11RAQ14626 422 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 C1orf43Q9BWL3 253 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 CAMSAP1Q5T5Y3 1602 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 CSRP2Q16527 193 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 A0A1W2PQD3 144 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 FSTP19883 344 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 EFNB3Q15768 340 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 RPRMLQ8N4K4 120 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 COX14Q96I36 57 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 YAE1D1Q9NRH1 226 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 C9JAW5 83 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 NACAE9PAV3 2078 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 F2Z2F3 143 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 RASL11AQ6T310 242 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 IGLC7A0M8Q6 106 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 PNRC2Q9NPJ4 139 aaKnown RBP3.08□□□□□ -1.92
ATXN3-248ENST00000558190 A0A1W2PPM0 123 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 PHF7Q9BWX1 381 aaPredicted RBP3.08□□□□□ -1.92
ATXN3-248ENST00000558190 FAM166AQ6J272 317 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 LRRC61Q9BV99 259 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 RALGAPA1Q6GYQ0 2036 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 E9PQ18 207 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 COX8AP10176 69 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 TMEM78Q5T7P6 136 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 TMEM54Q969K7 222 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 TM4SF4P48230 202 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 SPG11Q96JI7 2443 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 CCDC88AQ3V6T2 1871 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 MYO3AQ8NEV4 1616 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 SYT8Q8NBV8 401 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 A0A0A6YYD4 124 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 COA6Q5JTJ3 125 aaKnown RBP3.08□□□□□ -1.92
ATXN3-248ENST00000558190 PRADC1Q9BSG0 188 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 RRN3P1Q2M238 152 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 PYGO2Q9BRQ0 406 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 CHAC1Q9BUX1 264 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 PRO1854Q9UHT4 67 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 QRICH2Q9H0J4 1663 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 KNDC1Q76NI1 1749 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 IGKV3-20P01619 116 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 PAPPA-AS1Q5QFB9 102 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 FAM214BQ7L5A3 538 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF714Q96N38 554 aa3.08□□□□□ -1.92
ATXN3-248ENST00000558190 SCN1AP35498 2009 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 FOXF2Q12947 444 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 C19orf54Q5BKX5 351 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 COPS9Q8WXC6 57 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 FAM90A10PA6NDY2 464 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 FAM90A18PA6NE21 464 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 FAM90A16PA6NEW6 464 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 FAM90A20PA6NIJ5 464 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 FAM90A8PA6NJQ4 464 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 FAM90A7PA6NKC0 464 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 FAM90A22PA8MWA6 464 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 FAM90A12PA8MX19 464 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms