RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 OVOL1O14753 267 aa11.01□□□□□ -0.65
USP3-205ENST00000557884 IGHV3-48P01763 117 aa11.01□□□□□ -0.65
USP3-205ENST00000557884 RNASE2P10153 161 aaKnown RBP11.01□□□□□ -0.65
USP3-205ENST00000557884 ZP3P21754 424 aa11.01□□□□□ -0.65
USP3-205ENST00000557884 GPR183P32249 361 aa11.01□□□□□ -0.65
USP3-205ENST00000557884 RPEL1Q2QD12 228 aa11.01□□□□□ -0.65
USP3-205ENST00000557884 PDLIM3Q53GG5 364 aaPredicted RBP11.01□□□□□ -0.65
USP3-205ENST00000557884 SAMD5Q5TGI4 173 aa11.01□□□□□ -0.65
USP3-205ENST00000557884 UXS1Q8NBZ7 420 aa11.01□□□□□ -0.65
USP3-205ENST00000557884 ZNF502Q8TBZ5 544 aa11.01□□□□□ -0.65
USP3-205ENST00000557884 ZNF431Q8TF32 576 aaPredicted RBP11.01□□□□□ -0.65
USP3-205ENST00000557884 MITD1Q8WV92 249 aa11.01□□□□□ -0.65
USP3-205ENST00000557884 PINX1Q96BK5 328 aaKnown RBP11.01□□□□□ -0.65
USP3-205ENST00000557884 CXorf58Q96LI9 332 aa11.01□□□□□ -0.65
USP3-205ENST00000557884 HSPB7Q9UBY9 170 aa11.01□□□□□ -0.65
USP3-205ENST00000557884 TRBV7-1A0A0A6YYK4 115 aa11□□□□□ -0.65
USP3-205ENST00000557884 SEC14L6B5MCN3 397 aa11□□□□□ -0.65
USP3-205ENST00000557884 PITX3O75364 302 aa11□□□□□ -0.65
USP3-205ENST00000557884 MT-CO2P00403 227 aa11□□□□□ -0.65
USP3-205ENST00000557884 IFNA21P01568 189 aa11□□□□□ -0.65
USP3-205ENST00000557884 CLEC3BP05452 202 aa11□□□□□ -0.65
USP3-205ENST00000557884 ARL3P36405 182 aa11□□□□□ -0.65
USP3-205ENST00000557884 SUB1P53999 127 aaKnown RBP eCLIP11□□□□□ -0.65
USP3-205ENST00000557884 SYNJ2BPP57105 145 aa11□□□□□ -0.65
USP3-205ENST00000557884 UBAC2Q8NBM4 344 aa11□□□□□ -0.65
USP3-205ENST00000557884 DUSP18Q8NEJ0 188 aa11□□□□□ -0.65
USP3-205ENST00000557884 VN1R17PQ8TDU5 208 aa11□□□□□ -0.65
USP3-205ENST00000557884 DTD1Q8TEA8 209 aa11□□□□□ -0.65
USP3-205ENST00000557884 SCARB1Q8WTV0 552 aa11□□□□□ -0.65
USP3-205ENST00000557884 C21orf62Q9NYP8 219 aa11□□□□□ -0.65
USP3-205ENST00000557884 OR2T8A6NH00 312 aa10.99□□□□□ -0.65
USP3-205ENST00000557884 I3L2K1 104 aa10.99□□□□□ -0.65
USP3-205ENST00000557884 CCSO14618 274 aa10.99□□□□□ -0.65
USP3-205ENST00000557884 OR2C1O95371 312 aa10.99□□□□□ -0.65
USP3-205ENST00000557884 IAPPP10997 89 aa10.99□□□□□ -0.65
USP3-205ENST00000557884 SLC25A6P12236 298 aa10.99□□□□□ -0.65
USP3-205ENST00000557884 SPNP16150 400 aa10.99□□□□□ -0.65
USP3-205ENST00000557884 KLF5Q13887 457 aaPredicted RBP10.99□□□□□ -0.65
USP3-205ENST00000557884 PLET1Q6UQ28 207 aa10.99□□□□□ -0.65
USP3-205ENST00000557884 MCRIP2Q9BUT9 160 aaKnown RBP10.99□□□□□ -0.65
USP3-205ENST00000557884 MAGT1Q9H0U3 335 aa10.99□□□□□ -0.65
USP3-205ENST00000557884 CACFD1Q9UGQ2 172 aa10.99□□□□□ -0.65
USP3-205ENST00000557884 IGHV3-35A0A0C4DH35 117 aa10.98□□□□□ -0.65
USP3-205ENST00000557884 INMT-MINDY4F8WBC2 141 aa10.98□□□□□ -0.65
USP3-205ENST00000557884 GGCTO75223 188 aaKnown RBP10.98□□□□□ -0.65
USP3-205ENST00000557884 IL5P05113 134 aa10.98□□□□□ -0.65
USP3-205ENST00000557884 HTR2BP41595 481 aa10.98□□□□□ -0.65
USP3-205ENST00000557884 BSXQ3C1V8 233 aa10.98□□□□□ -0.65
USP3-205ENST00000557884 Q56UQ5 140 aa10.98□□□□□ -0.65
USP3-205ENST00000557884 FAM209BQ5JX69 171 aa10.98□□□□□ -0.65
USP3-205ENST00000557884 C12orf45Q8N5I9 185 aaPredicted RBP10.98□□□□□ -0.65
USP3-205ENST00000557884 SLC24A4Q8NFF2 622 aa10.98□□□□□ -0.65
USP3-205ENST00000557884 HIPK2Q9H2X6 1198 aa10.98□□□□□ -0.65
USP3-205ENST00000557884 FAM25EA8MYX2 175 aa10.97□□□□□ -0.65
USP3-205ENST00000557884 F8W735 103 aaPredicted RBP10.97□□□□□ -0.65
USP3-205ENST00000557884 SAP30O75446 220 aa10.97□□□□□ -0.65
USP3-205ENST00000557884 IFNA10P01566 189 aa10.97□□□□□ -0.65
USP3-205ENST00000557884 PRB2P02812 416 aaPredicted RBP10.97□□□□□ -0.65
USP3-205ENST00000557884 NPY1RP25929 384 aa10.97□□□□□ -0.65
USP3-205ENST00000557884 IAH1Q2TAA2 248 aaPredicted RBP10.97□□□□□ -0.65
USP3-205ENST00000557884 BEAN1Q3B7T3 259 aa10.97□□□□□ -0.65
USP3-205ENST00000557884 C9orf66Q5T8R8 295 aa10.97□□□□□ -0.65
USP3-205ENST00000557884 PVRIGQ6DKI7 326 aa10.97□□□□□ -0.65
USP3-205ENST00000557884 TMEM170AQ8WVE7 144 aa10.97□□□□□ -0.65
USP3-205ENST00000557884 OR10C1Q96KK4 312 aa10.97□□□□□ -0.65
USP3-205ENST00000557884 GPR61Q9BZJ8 451 aa10.97□□□□□ -0.65
USP3-205ENST00000557884 GSKIPQ9P0R6 139 aa10.97□□□□□ -0.65
USP3-205ENST00000557884 FAM90A26D6RGX4 464 aa10.96□□□□□ -0.65
USP3-205ENST00000557884 TGOLN2O43493 480 aa10.96□□□□□ -0.65
USP3-205ENST00000557884 SCGB1D2O95969 90 aa10.96□□□□□ -0.65
USP3-205ENST00000557884 OPRK1P41145 380 aa10.96□□□□□ -0.65
USP3-205ENST00000557884 MFAP4P55083 255 aa10.96□□□□□ -0.65
USP3-205ENST00000557884 MLANAQ16655 118 aa10.96□□□□□ -0.65
USP3-205ENST00000557884 TATDN3Q17R31 274 aa10.96□□□□□ -0.65
USP3-205ENST00000557884 C2orf83Q53S99 150 aa10.96□□□□□ -0.65
USP3-205ENST00000557884 ACSM6Q6P461 480 aa10.96□□□□□ -0.65
USP3-205ENST00000557884 OR9G4Q8NGQ1 327 aa10.96□□□□□ -0.65
USP3-205ENST00000557884 CHRDL1Q9BU40 450 aa10.96□□□□□ -0.65
USP3-205ENST00000557884 PAIP2BQ9ULR5 123 aaKnown RBP10.96□□□□□ -0.65
USP3-205ENST00000557884 ZNF320A2RRD8 509 aa10.95□□□□□ -0.66
USP3-205ENST00000557884 C5orf51A6NDU8 294 aa10.95□□□□□ -0.66
USP3-205ENST00000557884 WRBO00258 174 aa10.95□□□□□ -0.66
USP3-205ENST00000557884 SYNGR2O43760 224 aa10.95□□□□□ -0.66
USP3-205ENST00000557884 MED6O75586 246 aa10.95□□□□□ -0.66
USP3-205ENST00000557884 NKX2-1P43699 371 aaPredicted RBP10.95□□□□□ -0.66
USP3-205ENST00000557884 KRTAP10-11P60412 298 aa10.95□□□□□ -0.66
USP3-205ENST00000557884 POLR2GP62487 172 aaKnown RBP eCLIP10.95□□□□□ -0.66
USP3-205ENST00000557884 DEFA6Q01524 100 aa10.95□□□□□ -0.66
USP3-205ENST00000557884 HAPLN4Q86UW8 402 aa10.95□□□□□ -0.66
USP3-205ENST00000557884 ZBTB8BQ8NAP8 495 aaPredicted RBP10.95□□□□□ -0.66
USP3-205ENST00000557884 OR4D5Q8NGN0 318 aa10.95□□□□□ -0.66
USP3-205ENST00000557884 BSCL2Q96G97 398 aaPredicted RBP10.95□□□□□ -0.66
USP3-205ENST00000557884 MARVELD1Q9BSK0 173 aa10.95□□□□□ -0.66
USP3-205ENST00000557884 ELOVL1Q9BW60 279 aa10.95□□□□□ -0.66
USP3-205ENST00000557884 FNDC4Q9H6D8 234 aaPredicted RBP10.95□□□□□ -0.66
USP3-205ENST00000557884 GPN1Q9HCN4 374 aaPredicted RBP10.95□□□□□ -0.66
USP3-205ENST00000557884 U3KQ87 197 aa10.95□□□□□ -0.66
USP3-205ENST00000557884 CORTO00230 105 aa10.94□□□□□ -0.66
USP3-205ENST00000557884 SSSCA1O60232 199 aa10.94□□□□□ -0.66
USP3-205ENST00000557884 ADMP35318 185 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms