RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 CLEC19AQ6UXS0 136 aa11.42□□□□□ -0.58
VIPAS39-210ENST00000557466 UXS1Q8NBZ7 420 aa11.42□□□□□ -0.58
VIPAS39-210ENST00000557466 ZNF502Q8TBZ5 544 aa11.42□□□□□ -0.58
VIPAS39-210ENST00000557466 DTD1Q8TEA8 209 aa11.42□□□□□ -0.58
VIPAS39-210ENST00000557466 CXorf58Q96LI9 332 aa11.42□□□□□ -0.58
VIPAS39-210ENST00000557466 TRRAPQ9Y4A5 3859 aa11.42□□□□□ -0.58
VIPAS39-210ENST00000557466 FAM90A26D6RGX4 464 aa11.41□□□□□ -0.58
VIPAS39-210ENST00000557466 PPP5D1E7EU14 171 aa11.41□□□□□ -0.58
VIPAS39-210ENST00000557466 I3L2K1 104 aa11.41□□□□□ -0.58
VIPAS39-210ENST00000557466 BMPR1BO00238 502 aa11.41□□□□□ -0.58
VIPAS39-210ENST00000557466 PRAF2O60831 178 aa11.41□□□□□ -0.58
VIPAS39-210ENST00000557466 SLC24A4Q8NFF2 622 aa11.41□□□□□ -0.58
VIPAS39-210ENST00000557466 OR4D5Q8NGN0 318 aa11.41□□□□□ -0.58
VIPAS39-210ENST00000557466 VN1R17PQ8TDU5 208 aa11.41□□□□□ -0.58
VIPAS39-210ENST00000557466 DCUN1D4Q92564 292 aa11.41□□□□□ -0.58
VIPAS39-210ENST00000557466 DLX4Q92988 240 aaPredicted RBP11.41□□□□□ -0.58
VIPAS39-210ENST00000557466 OR10C1Q96KK4 312 aa11.41□□□□□ -0.58
VIPAS39-210ENST00000557466 GPN1Q9HCN4 374 aaPredicted RBP11.41□□□□□ -0.58
VIPAS39-210ENST00000557466 VWFP04275 2813 aa11.41□□□□□ -0.58
VIPAS39-210ENST00000557466 TRBV7-1A0A0A6YYK4 115 aa11.4□□□□□ -0.58
VIPAS39-210ENST00000557466 MT-CO2P00403 227 aa11.4□□□□□ -0.58
VIPAS39-210ENST00000557466 IAPPP10997 89 aa11.4□□□□□ -0.58
VIPAS39-210ENST00000557466 IGLL1P15814 213 aa11.4□□□□□ -0.58
VIPAS39-210ENST00000557466 ZP3P21754 424 aa11.4□□□□□ -0.58
VIPAS39-210ENST00000557466 GPR183P32249 361 aa11.4□□□□□ -0.58
VIPAS39-210ENST00000557466 HTR2BP41595 481 aa11.4□□□□□ -0.58
VIPAS39-210ENST00000557466 SUB1P53999 127 aaKnown RBP eCLIP11.4□□□□□ -0.58
VIPAS39-210ENST00000557466 DCTN2Q13561 401 aaKnown RBP11.4□□□□□ -0.58
VIPAS39-210ENST00000557466 IAH1Q2TAA2 248 aaPredicted RBP11.4□□□□□ -0.58
VIPAS39-210ENST00000557466 FAM209BQ5JX69 171 aa11.4□□□□□ -0.58
VIPAS39-210ENST00000557466 ZBTB8BQ8NAP8 495 aaPredicted RBP11.4□□□□□ -0.58
VIPAS39-210ENST00000557466 SCARB1Q8WTV0 552 aa11.4□□□□□ -0.58
VIPAS39-210ENST00000557466 TMEM170AQ8WVE7 144 aa11.4□□□□□ -0.58
VIPAS39-210ENST00000557466 PINX1Q96BK5 328 aaKnown RBP11.4□□□□□ -0.58
VIPAS39-210ENST00000557466 RCC1LQ96I51 464 aaKnown RBP11.4□□□□□ -0.58
VIPAS39-210ENST00000557466 MAGT1Q9H0U3 335 aa11.4□□□□□ -0.58
VIPAS39-210ENST00000557466 HIPK2Q9H2X6 1198 aa11.4□□□□□ -0.58
VIPAS39-210ENST00000557466 SNRPGP15A8MWD9 76 aa11.39□□□□□ -0.59
VIPAS39-210ENST00000557466 F8W735 103 aaPredicted RBP11.39□□□□□ -0.59
VIPAS39-210ENST00000557466 IGHV3-48P01763 117 aa11.39□□□□□ -0.59
VIPAS39-210ENST00000557466 NPY1RP25929 384 aa11.39□□□□□ -0.59
VIPAS39-210ENST00000557466 ARL3P36405 182 aa11.39□□□□□ -0.59
VIPAS39-210ENST00000557466 RPEL1Q2QD12 228 aa11.39□□□□□ -0.59
VIPAS39-210ENST00000557466 C2orf83Q53S99 150 aa11.39□□□□□ -0.59
VIPAS39-210ENST00000557466 ZC4H2Q9NQZ6 224 aa11.39□□□□□ -0.59
VIPAS39-210ENST00000557466 C21orf62Q9NYP8 219 aa11.39□□□□□ -0.59
VIPAS39-210ENST00000557466 FAM25EA8MYX2 175 aa11.38□□□□□ -0.59
VIPAS39-210ENST00000557466 G3V4G9 280 aa11.38□□□□□ -0.59
VIPAS39-210ENST00000557466 CORTO00230 105 aa11.38□□□□□ -0.59
VIPAS39-210ENST00000557466 OVOL1O14753 267 aa11.38□□□□□ -0.59
VIPAS39-210ENST00000557466 SYNGR2O43760 224 aa11.38□□□□□ -0.59
VIPAS39-210ENST00000557466 MED6O75586 246 aa11.38□□□□□ -0.59
VIPAS39-210ENST00000557466 SCGB1D2O95969 90 aa11.38□□□□□ -0.59
VIPAS39-210ENST00000557466 NKX2-1P43699 371 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-210ENST00000557466 POLR2GP62487 172 aaKnown RBP eCLIP11.38□□□□□ -0.59
VIPAS39-210ENST00000557466 ID3Q02535 119 aa11.38□□□□□ -0.59
VIPAS39-210ENST00000557466 OXLD1Q5BKU9 147 aa11.38□□□□□ -0.59
VIPAS39-210ENST00000557466 SAMD5Q5TGI4 173 aa11.38□□□□□ -0.59
VIPAS39-210ENST00000557466 FNDC4Q9H6D8 234 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-210ENST00000557466 C5orf51A6NDU8 294 aa11.37□□□□□ -0.59
VIPAS39-210ENST00000557466 OR2T8A6NH00 312 aa11.37□□□□□ -0.59
VIPAS39-210ENST00000557466 WRBO00258 174 aa11.37□□□□□ -0.59
VIPAS39-210ENST00000557466 TGOLN2O43493 480 aa11.37□□□□□ -0.59
VIPAS39-210ENST00000557466 GGCTO75223 188 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-210ENST00000557466 IFNA10P01566 189 aa11.37□□□□□ -0.59
VIPAS39-210ENST00000557466 CLEC3BP05452 202 aa11.37□□□□□ -0.59
VIPAS39-210ENST00000557466 OPRK1P41145 380 aa11.37□□□□□ -0.59
VIPAS39-210ENST00000557466 SYNJ2BPP57105 145 aa11.37□□□□□ -0.59
VIPAS39-210ENST00000557466 KLF5Q13887 457 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-210ENST00000557466 Q56UQ5 140 aa11.37□□□□□ -0.59
VIPAS39-210ENST00000557466 C1QL4Q86Z23 238 aa11.37□□□□□ -0.59
VIPAS39-210ENST00000557466 UBAC2Q8NBM4 344 aa11.37□□□□□ -0.59
VIPAS39-210ENST00000557466 MCRIP2Q9BUT9 160 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-210ENST00000557466 GSKIPQ9P0R6 139 aa11.37□□□□□ -0.59
VIPAS39-210ENST00000557466 MGAM2Q2M2H8 2515 aa11.37□□□□□ -0.59
VIPAS39-210ENST00000557466 CMYA5Q8N3K9 4069 aa11.36□□□□□ -0.59
VIPAS39-210ENST00000557466 C7orf66A4D0T2 115 aa11.36□□□□□ -0.59
VIPAS39-210ENST00000557466 C15orf62A8K5M9 175 aa11.36□□□□□ -0.59
VIPAS39-210ENST00000557466 SEC14L6B5MCN3 397 aa11.36□□□□□ -0.59
VIPAS39-210ENST00000557466 SSSCA1O60232 199 aa11.36□□□□□ -0.59
VIPAS39-210ENST00000557466 OR2C1O95371 312 aa11.36□□□□□ -0.59
VIPAS39-210ENST00000557466 MFAP4P55083 255 aa11.36□□□□□ -0.59
VIPAS39-210ENST00000557466 TATDN3Q17R31 274 aa11.36□□□□□ -0.59
VIPAS39-210ENST00000557466 RGS21Q2M5E4 152 aa11.36□□□□□ -0.59
VIPAS39-210ENST00000557466 GSG1LQ6UXU4 331 aa11.36□□□□□ -0.59
VIPAS39-210ENST00000557466 RNASEH2CQ8TDP1 164 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-210ENST00000557466 C2orf50Q96LR7 162 aa11.36□□□□□ -0.59
VIPAS39-210ENST00000557466 CIB3Q96Q77 187 aaPredicted RBP11.36□□□□□ -0.59
VIPAS39-210ENST00000557466 OR4C12Q96R67 309 aa11.36□□□□□ -0.59
VIPAS39-210ENST00000557466 ATP6V0BQ99437 205 aa11.36□□□□□ -0.59
VIPAS39-210ENST00000557466 MRPL36Q9P0J6 103 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-210ENST00000557466 RCL1Q9Y2P8 373 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-210ENST00000557466 U3KQ87 197 aa11.36□□□□□ -0.59
VIPAS39-210ENST00000557466 PKD1L1Q8TDX9 2849 aa11.35□□□□□ -0.59
VIPAS39-210ENST00000557466 GOSR2O14653 212 aa11.35□□□□□ -0.59
VIPAS39-210ENST00000557466 MBPP02686 304 aaPredicted RBP11.35□□□□□ -0.59
VIPAS39-210ENST00000557466 FCGR2BP31994 310 aaPredicted RBP11.35□□□□□ -0.59
VIPAS39-210ENST00000557466 ADMP35318 185 aa11.35□□□□□ -0.59
VIPAS39-210ENST00000557466 MLANAQ16655 118 aa11.35□□□□□ -0.59
VIPAS39-210ENST00000557466 ACSM6Q6P461 480 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 652.8 ms