RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 SLC25A48Q6ZT89 311 aaKnown RBP9.83□□□□□ -0.84
SHMT2-230ENST00000557427 MOB3BQ86TA1 216 aa9.83□□□□□ -0.84
SHMT2-230ENST00000557427 BPIFCQ8NFQ6 507 aa9.83□□□□□ -0.84
SHMT2-230ENST00000557427 OR5AU1Q8NGC0 362 aa9.83□□□□□ -0.84
SHMT2-230ENST00000557427 OR4S2Q8NH73 311 aa9.83□□□□□ -0.84
SHMT2-230ENST00000557427 CIB3Q96Q77 187 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-230ENST00000557427 PARD6GQ9BYG4 376 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-230ENST00000557427 SH3BGRL3Q9H299 93 aa9.83□□□□□ -0.84
SHMT2-230ENST00000557427 SAA2-SAA4A0A096LPE2 208 aa9.82□□□□□ -0.84
SHMT2-230ENST00000557427 OOSP1A8MZH6 123 aa9.82□□□□□ -0.84
SHMT2-230ENST00000557427 H3BP45 60 aa9.82□□□□□ -0.84
SHMT2-230ENST00000557427 IFNA5P01569 189 aa9.82□□□□□ -0.84
SHMT2-230ENST00000557427 SNRNP70P08621 437 aaKnown RBP9.82□□□□□ -0.84
SHMT2-230ENST00000557427 OR8U8P0C7N1 319 aa9.82□□□□□ -0.84
SHMT2-230ENST00000557427 SAA2P0DJI9 122 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-230ENST00000557427 NQO2P16083 231 aa9.82□□□□□ -0.84
SHMT2-230ENST00000557427 CAMLGP49069 296 aa9.82□□□□□ -0.84
SHMT2-230ENST00000557427 ERVK-16P61578 105 aa9.82□□□□□ -0.84
SHMT2-230ENST00000557427 TMEM267Q0VDI3 215 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-230ENST00000557427 CENPVQ7Z7K6 275 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-230ENST00000557427 TMEM217Q8N7C4 229 aa9.82□□□□□ -0.84
SHMT2-230ENST00000557427 C8orf31Q8N9H6 132 aa9.82□□□□□ -0.84
SHMT2-230ENST00000557427 OR52E5Q8NH55 327 aa9.82□□□□□ -0.84
SHMT2-230ENST00000557427 RBM14Q96PK6 669 aaKnown RBP9.82□□□□□ -0.84
SHMT2-230ENST00000557427 HRH4Q9H3N8 390 aa9.82□□□□□ -0.84
SHMT2-230ENST00000557427 IGHV3-72A0A0B4J1Y9 119 aa9.81□□□□□ -0.84
SHMT2-230ENST00000557427 TMEM218A2RU14 115 aa9.81□□□□□ -0.84
SHMT2-230ENST00000557427 METTL15P1P0C7V9 234 aa9.81□□□□□ -0.84
SHMT2-230ENST00000557427 LINC00205P59089 165 aa9.81□□□□□ -0.84
SHMT2-230ENST00000557427 POU2AF1Q16633 256 aa9.81□□□□□ -0.84
SHMT2-230ENST00000557427 ATP6V1FQ16864 119 aa9.81□□□□□ -0.84
SHMT2-230ENST00000557427 DPPA3Q6W0C5 159 aa9.81□□□□□ -0.84
SHMT2-230ENST00000557427 ETV3LQ6ZN32 361 aa9.81□□□□□ -0.84
SHMT2-230ENST00000557427 HAPLN4Q86UW8 402 aa9.81□□□□□ -0.84
SHMT2-230ENST00000557427 THNSL2Q86YJ6 484 aa9.81□□□□□ -0.84
SHMT2-230ENST00000557427 MRPL41Q8IXM3 137 aaKnown RBP9.81□□□□□ -0.84
SHMT2-230ENST00000557427 LINC00311Q8N616 119 aa9.81□□□□□ -0.84
SHMT2-230ENST00000557427 OR2G3Q8NGZ4 309 aa9.81□□□□□ -0.84
SHMT2-230ENST00000557427 DTD1Q8TEA8 209 aa9.81□□□□□ -0.84
SHMT2-230ENST00000557427 DPF1Q92782 380 aa9.81□□□□□ -0.84
SHMT2-230ENST00000557427 FRAS1Q86XX4 4008 aa9.8□□□□□ -0.84
SHMT2-230ENST00000557427 CRYZL1O95825 349 aa9.8□□□□□ -0.84
SHMT2-230ENST00000557427 PRH1P02810 166 aa9.8□□□□□ -0.84
SHMT2-230ENST00000557427 AMY1AP04745 511 aa9.8□□□□□ -0.84
SHMT2-230ENST00000557427 OR9G9P0C7N8 305 aa9.8□□□□□ -0.84
SHMT2-230ENST00000557427 TMEM11P17152 192 aa9.8□□□□□ -0.84
SHMT2-230ENST00000557427 M6PRP20645 277 aa9.8□□□□□ -0.84
SHMT2-230ENST00000557427 SPCS3P61009 180 aa9.8□□□□□ -0.84
SHMT2-230ENST00000557427 ARL16Q0P5N6 197 aa9.8□□□□□ -0.84
SHMT2-230ENST00000557427 SPANXN5Q5MJ07 72 aa9.8□□□□□ -0.84
SHMT2-230ENST00000557427 C10orf91Q5T1B1 145 aa9.8□□□□□ -0.84
SHMT2-230ENST00000557427 FAM71F2Q6NXP2 309 aa9.8□□□□□ -0.84
SHMT2-230ENST00000557427 TMEM182Q6ZP80 229 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-230ENST00000557427 ZNF833PQ6ZTB9 187 aa9.8□□□□□ -0.84
SHMT2-230ENST00000557427 C16orf82Q7Z2V1 217 aa9.8□□□□□ -0.84
SHMT2-230ENST00000557427 ZNF383Q8NA42 475 aa9.8□□□□□ -0.84
SHMT2-230ENST00000557427 LFNGQ8NES3 379 aa9.8□□□□□ -0.84
SHMT2-230ENST00000557427 SCGB1C1Q8TD33 95 aa9.8□□□□□ -0.84
SHMT2-230ENST00000557427 RBMXL1Q96E39 390 aaKnown RBP9.8□□□□□ -0.84
SHMT2-230ENST00000557427 PSMG3Q9BT73 122 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-230ENST00000557427 HIPK2Q9H2X6 1198 aa9.8□□□□□ -0.84
SHMT2-230ENST00000557427 TSSC4Q9Y5U2 329 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-230ENST00000557427 IGHV1-3A0A0C4DH29 117 aa9.79□□□□□ -0.84
SHMT2-230ENST00000557427 A0A1W2PPI3 338 aa9.79□□□□□ -0.84
SHMT2-230ENST00000557427 TCRBV4S1A1TA0A5B7 111 aa9.79□□□□□ -0.84
SHMT2-230ENST00000557427 PMS2P5A8MQ11 134 aa9.79□□□□□ -0.84
SHMT2-230ENST00000557427 CEBPZOSA8MTT3 80 aa9.79□□□□□ -0.84
SHMT2-230ENST00000557427 HRASP01112 189 aa9.79□□□□□ -0.84
SHMT2-230ENST00000557427 IGKV1D-33P01593 117 aa9.79□□□□□ -0.84
SHMT2-230ENST00000557427 IGKV1-33P01594 117 aa9.79□□□□□ -0.84
SHMT2-230ENST00000557427 CD5P06127 495 aa9.79□□□□□ -0.84
SHMT2-230ENST00000557427 TAGLNQ01995 201 aaKnown RBP9.79□□□□□ -0.84
SHMT2-230ENST00000557427 SLC38A11Q08AI6 406 aa9.79□□□□□ -0.84
SHMT2-230ENST00000557427 C10orf99Q6UWK7 81 aa9.79□□□□□ -0.84
SHMT2-230ENST00000557427 ZNF429Q86V71 674 aa9.79□□□□□ -0.84
SHMT2-230ENST00000557427 PUSL1Q8N0Z8 303 aaKnown RBP9.79□□□□□ -0.84
SHMT2-230ENST00000557427 LILRB2Q8N423 598 aa9.79□□□□□ -0.84
SHMT2-230ENST00000557427 OR4A16Q8NH70 328 aa9.79□□□□□ -0.84
SHMT2-230ENST00000557427 RCHY1Q96PM5 261 aa9.79□□□□□ -0.84
SHMT2-230ENST00000557427 OR4C12Q96R67 309 aa9.79□□□□□ -0.84
SHMT2-230ENST00000557427 AIFM2Q9BRQ8 373 aa9.79□□□□□ -0.84
SHMT2-230ENST00000557427 QTRT1Q9BXR0 403 aaKnown RBP9.79□□□□□ -0.84
SHMT2-230ENST00000557427 TMEM140Q9NV12 185 aa9.79□□□□□ -0.84
SHMT2-230ENST00000557427 A0A1B0GW64 132 aa9.78□□□□□ -0.84
SHMT2-230ENST00000557427 NCBP2LA6PVI3 153 aaKnown RBP9.78□□□□□ -0.84
SHMT2-230ENST00000557427 RBMXL2O75526 392 aaKnown RBP9.78□□□□□ -0.84
SHMT2-230ENST00000557427 IL3RAP26951 378 aa9.78□□□□□ -0.84
SHMT2-230ENST00000557427 SNCAP37840 140 aa9.78□□□□□ -0.84
SHMT2-230ENST00000557427 ZNF616Q08AN1 781 aa9.78□□□□□ -0.84
SHMT2-230ENST00000557427 RTL8BQ17RB0 113 aa9.78□□□□□ -0.84
SHMT2-230ENST00000557427 SLC25A24Q6NUK1 477 aa9.78□□□□□ -0.84
SHMT2-230ENST00000557427 FAM213BQ8TBF2 198 aa9.78□□□□□ -0.84
SHMT2-230ENST00000557427 PINX1Q96BK5 328 aaKnown RBP9.78□□□□□ -0.84
SHMT2-230ENST00000557427 NARS2Q96I59 477 aaKnown RBP9.78□□□□□ -0.84
SHMT2-230ENST00000557427 PRR25Q96S07 402 aa9.78□□□□□ -0.84
SHMT2-230ENST00000557427 CLCC1Q96S66 551 aa9.78□□□□□ -0.84
SHMT2-230ENST00000557427 GPR61Q9BZJ8 451 aa9.78□□□□□ -0.84
SHMT2-230ENST00000557427 TREM1Q9NP99 234 aa9.78□□□□□ -0.84
SHMT2-230ENST00000557427 UQCC1Q9NVA1 299 aa9.78□□□□□ -0.84
SHMT2-230ENST00000557427 CARHSP1Q9Y2V2 147 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms