RNA–Protein interactions for RNA: ENST00000557307.1

SYNE2-227, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 526 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-227ENST00000557307 RORCP51449 518 aa8.05□□□□□ -1.12
SYNE2-227ENST00000557307 PIGPP57054 158 aa8.05□□□□□ -1.12
SYNE2-227ENST00000557307 RND3P61587 244 aa8.05□□□□□ -1.12
SYNE2-227ENST00000557307 HSPE1P61604 102 aaKnown RBP8.05□□□□□ -1.12
SYNE2-227ENST00000557307 SPCS2Q15005 226 aa8.05□□□□□ -1.12
SYNE2-227ENST00000557307 MLANAQ16655 118 aa8.05□□□□□ -1.12
SYNE2-227ENST00000557307 FAM90A2PQ658T7 463 aa8.05□□□□□ -1.12
SYNE2-227ENST00000557307 Q6ZRM9 215 aa8.05□□□□□ -1.12
SYNE2-227ENST00000557307 OR13C8Q8NGS7 320 aa8.05□□□□□ -1.12
SYNE2-227ENST00000557307 LHFPL5Q8TAF8 219 aa8.05□□□□□ -1.12
SYNE2-227ENST00000557307 MARCH1Q8TCQ1 289 aa8.05□□□□□ -1.12
SYNE2-227ENST00000557307 OR10C1Q96KK4 312 aa8.05□□□□□ -1.12
SYNE2-227ENST00000557307 RHPN1-AS1Q9BWJ2 59 aa8.05□□□□□ -1.12
SYNE2-227ENST00000557307 NXF2Q9GZY0 626 aaKnown RBP8.05□□□□□ -1.12
SYNE2-227ENST00000557307 ZFAND3Q9H8U3 227 aa8.05□□□□□ -1.12
SYNE2-227ENST00000557307 FAM212BQ9NTI7 297 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-227ENST00000557307 MTFP1Q9UDX5 166 aa8.05□□□□□ -1.12
SYNE2-227ENST00000557307 A0A1B0GU03 582 aa8.04□□□□□ -1.12
SYNE2-227ENST00000557307 SMIM31A0A1B0GVY4 71 aa8.04□□□□□ -1.12
SYNE2-227ENST00000557307 C15orf62A8K5M9 175 aa8.04□□□□□ -1.12
SYNE2-227ENST00000557307 CTDSP2O14595 271 aa8.04□□□□□ -1.12
SYNE2-227ENST00000557307 RNASE2P10153 161 aaKnown RBP8.04□□□□□ -1.12
SYNE2-227ENST00000557307 MFAP4P55083 255 aa8.04□□□□□ -1.12
SYNE2-227ENST00000557307 TNFRSF9Q07011 255 aa8.04□□□□□ -1.12
SYNE2-227ENST00000557307 ANKRD55Q3KP44 614 aa8.04□□□□□ -1.12
SYNE2-227ENST00000557307 RNASE10Q5GAN6 216 aaKnown RBP8.04□□□□□ -1.12
SYNE2-227ENST00000557307 LPCAT3Q6P1A2 487 aa8.04□□□□□ -1.12
SYNE2-227ENST00000557307 TOMM20LQ6UXN7 152 aa8.04□□□□□ -1.12
SYNE2-227ENST00000557307 LYG2Q86SG7 212 aa8.04□□□□□ -1.12
SYNE2-227ENST00000557307 GBGT1Q8N5D6 347 aa8.04□□□□□ -1.12
SYNE2-227ENST00000557307 ST8SIA2Q92186 375 aa8.04□□□□□ -1.12
SYNE2-227ENST00000557307 TSC22D3Q99576 134 aa8.04□□□□□ -1.12
SYNE2-227ENST00000557307 FNDC4Q9H6D8 234 aaPredicted RBP8.04□□□□□ -1.12
SYNE2-227ENST00000557307 MAP6D1Q9H9H5 199 aa8.04□□□□□ -1.12
SYNE2-227ENST00000557307 PRR13Q9NZ81 148 aa8.04□□□□□ -1.12
SYNE2-227ENST00000557307 DNAH6Q9C0G6 4158 aa8.04□□□□□ -1.12
SYNE2-227ENST00000557307 C3orf85A0A1B0GTC6 90 aa8.03□□□□□ -1.12
SYNE2-227ENST00000557307 CYB5BO43169 146 aa8.03□□□□□ -1.12
SYNE2-227ENST00000557307 SPRY2O43597 315 aa8.03□□□□□ -1.12
SYNE2-227ENST00000557307 YIF1AO95070 293 aa8.03□□□□□ -1.12
SYNE2-227ENST00000557307 CD74P04233 296 aa8.03□□□□□ -1.12
SYNE2-227ENST00000557307 ZNF182P17025 639 aaPredicted RBP8.03□□□□□ -1.12
SYNE2-227ENST00000557307 ETV6P41212 452 aa8.03□□□□□ -1.12
SYNE2-227ENST00000557307 AKR1C2P52895 323 aa8.03□□□□□ -1.12
SYNE2-227ENST00000557307 SCGB2B2Q4G0G5 96 aa8.03□□□□□ -1.12
SYNE2-227ENST00000557307 PVRIGQ6DKI7 326 aa8.03□□□□□ -1.12
SYNE2-227ENST00000557307 WFDC3Q8IUB2 231 aa8.03□□□□□ -1.12
SYNE2-227ENST00000557307 TMEM116Q8NCL8 245 aa8.03□□□□□ -1.12
SYNE2-227ENST00000557307 ATP6V0BQ99437 205 aa8.03□□□□□ -1.12
SYNE2-227ENST00000557307 FKBP11Q9NYL4 201 aa8.03□□□□□ -1.12
SYNE2-227ENST00000557307 OR4C46A6NHA9 309 aa8.02□□□□□ -1.13
SYNE2-227ENST00000557307 GNG7O60262 68 aa8.02□□□□□ -1.13
SYNE2-227ENST00000557307 JTBO76095 146 aa8.02□□□□□ -1.13
SYNE2-227ENST00000557307 UCP1P25874 307 aa8.02□□□□□ -1.13
SYNE2-227ENST00000557307 ALDH3B2P48448 385 aa8.02□□□□□ -1.13
SYNE2-227ENST00000557307 LAMTOR1Q6IAA8 161 aa8.02□□□□□ -1.13
SYNE2-227ENST00000557307 MZT2AQ6P582 158 aa8.02□□□□□ -1.13
SYNE2-227ENST00000557307 TCF24Q7RTU0 167 aa8.02□□□□□ -1.13
SYNE2-227ENST00000557307 ARRDC1Q8N5I2 433 aa8.02□□□□□ -1.13
SYNE2-227ENST00000557307 TMEM229BQ8NBD8 167 aa8.02□□□□□ -1.13
SYNE2-227ENST00000557307 LINC00476Q8WZB0 136 aa8.02□□□□□ -1.13
SYNE2-227ENST00000557307 RNF183Q96D59 192 aa8.02□□□□□ -1.13
SYNE2-227ENST00000557307 RTBDNQ9BSG5 229 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-227ENST00000557307 PUS1Q9Y606 427 aaKnown RBP eCLIP8.02□□□□□ -1.13
SYNE2-227ENST00000557307 CXorf65A6NEN9 183 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 NXPH3O95157 252 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 RAB3DO95716 219 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 TMEM50AO95807 157 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 OR5AC1P0C628 307 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 S100GP29377 79 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 APOC4P55056 127 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 RELQ04864 619 aaPredicted RBP8.01□□□□□ -1.13
SYNE2-227ENST00000557307 MEF2DQ14814 521 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 TRIM16LQ309B1 348 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 LEMD1Q68G75 181 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 STEAP1BQ6NZ63 245 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 Q6ZWC4 215 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 SLC35G3Q8N808 338 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 OR4C16Q8NGL9 310 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 TMEM170AQ8WVE7 144 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 ZNF486Q96H40 463 aaPredicted RBP8.01□□□□□ -1.13
SYNE2-227ENST00000557307 TXN2Q99757 166 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 VSIRQ9H7M9 311 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 TP53TG1Q9Y2A0 90 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 HECTD4Q9Y4D8 3996 aa8.01□□□□□ -1.13
SYNE2-227ENST00000557307 TRAV14DV4A0A0A6YYC5 116 aa8□□□□□ -1.13
SYNE2-227ENST00000557307 INS-IGF2F8WCM5 200 aa8□□□□□ -1.13
SYNE2-227ENST00000557307 DFFBO76075 338 aa8□□□□□ -1.13
SYNE2-227ENST00000557307 IFNA17P01571 189 aa8□□□□□ -1.13
SYNE2-227ENST00000557307 HOXA1P49639 335 aaPredicted RBP8□□□□□ -1.13
SYNE2-227ENST00000557307 ERHP84090 104 aaKnown RBP8□□□□□ -1.13
SYNE2-227ENST00000557307 BSXQ3C1V8 233 aa8□□□□□ -1.13
SYNE2-227ENST00000557307 TERB2Q8NHR7 220 aa8□□□□□ -1.13
SYNE2-227ENST00000557307 GLYATL2Q8WU03 294 aa8□□□□□ -1.13
SYNE2-227ENST00000557307 AP3S1Q92572 193 aa8□□□□□ -1.13
SYNE2-227ENST00000557307 TMEM230Q96A57 120 aa8□□□□□ -1.13
SYNE2-227ENST00000557307 GALNT14Q96FL9 552 aa8□□□□□ -1.13
SYNE2-227ENST00000557307 MS4A6AQ9H2W1 248 aa8□□□□□ -1.13
SYNE2-227ENST00000557307 COPZ2Q9P299 210 aa8□□□□□ -1.13
SYNE2-227ENST00000557307 KIR2DL5BA0A0G2JN68 375 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms